TomoSeq data search

Data search

Results for MligTC455_39651

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39651

1287

26.82

Mlig455_005542

Neo: -

Age: Up-Down-Up

Regeneration-downregulated BL: -1.833

Regeneration-depleted BL: -1.833

RNF217

Mlig455_005542 {REF} {Length: 2597} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=51.0]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=166, Expect=4e-45]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=163, Expect=3e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00016156, C27A12.6, [Score=72.4, Expect=2e-13]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=128, Expect=7e-32]} {RNA1509_57487} {RNA1310_11553.2} {RNA815_5548}

Cumulative graph for MligTC455_39651

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.858	4.901	0.24045	0.88700
RegionR2	-0.062	4.901	0.87192	1.00000
RegionR3	0.149	4.901	0.64074	1.00000
RegionR4	0.558	4.901	0.14406	0.38940
RegionR5	-0.329	4.901	0.31451	0.65435
RegionR6	0.259	4.901	0.42961	0.99340
RegionR7	0.508	4.901	0.16034	0.73921
RegionR8	-0.225	4.901	0.65498	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.682	4.901	0.15593	0.89903
RegenerationR2	-1.159	4.901	0.00180	0.06551
RegenerationR3	-1.266	4.901	0.00105	0.05129
RegenerationR4	-1.171	4.901	0.00257	0.06568
RegenerationR5	-0.397	4.901	0.30309	0.73045
RegenerationR6	-1.28	4.901	0.00170	0.04604
RegenerationBL	-1.833	4.901	0.00008	0.00367	Specific for BL: -1.833
RegenerationTP	-0.358	4.901	0.40275	0.83111

Genes with expression patterns similar to MligTC455_39651

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39651	1287	26.82	Mlig455_005542	Neo: - Age: Up-Down-Up Regeneration-downregulated BL: -1.833 Regeneration-depleted BL: -1.833	RNF217	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005542 {REF} {Length: 2597} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=51.0]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=166, Expect=4e-45]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=163, Expect=3e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00016156, C27A12.6, [Score=72.4, Expect=2e-13]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=128, Expect=7e-32]} {RNA1509_57487} {RNA1310_11553.2} {RNA815_5548}
2.	MligTC455_39652	1049	21.85	Mlig455_036203	Neo: - Age: Up-Up-Down Regeneration-downregulated BL: -1.979 Regeneration-depleted BL: -1.979	RNF217	2.701	0.988	-	-	0.991	0.722	-	Mlig455_036203 {REF} {Length: 5439} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=50.6]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=166, Expect=1e-44]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=163, Expect=5e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=68.6, Expect=5e-12]} {Celegans: WBGene00016156, C27A12.6, [Score=72.0, Expect=3e-13]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=128, Expect=8e-32]} {RNA1509_19339, RNA1509_41201, RNA1509_57487} {RNA1310_11553.2, RNA1509_19339, RNA1509_41201, RNA1509_57487} {RNA1509_19339, RNA1509_41201, RNA1509_57487, RNA815_5548}
3.	MligTC455_15816	271	5.65	Mlig455_021238	Neo: - Age: - Regeneration-upregulated TP: 3.866 Regeneration-enriched TP: 3.866		1.705	-	-	-	0.950	0.755	-	Mlig455_021238 {REF} {Length: 1556} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.2]} {RNA1310_21380} {RNA815_8662}
4.	MligTC455_11545	575	11.98	Mlig455_028030	Neo: - Age: -		1.702	0.951	-	0.751	-	-	-	Mlig455_028030 {REF} {Length: 5018} {TRANSSPLICED} {Smed: dd_Smed_v6_12364_0_1, dd_Smed_v6_12364_0_1, [RH, Score=485, Expect=7e-150]} {RNA1509_11986} {RNA1310_1255.1} {RNA815_6764}
5.	MligTC455_15942	908	18.92	Mlig455_035020, Mlig455_053446	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.273	NR1I2	0.968	0.968	-	-	-	-	-	Mlig455_035020 {REF} {Length: 4424} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=87.4, Expect=1e-17]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=84.3, Expect=6e-17]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=81.3, Expect=6e-16]} {Dmel: FBgn0003720, tll, tailless, [Score=82.0, Expect=3e-16]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=99.4, Expect=2e-21]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_8358} {RNA1310_9876} {RNA815_22592} Mlig455_053446 {REF} {Length: 4372} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.7]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=87.0, Expect=2e-17]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=84.0, Expect=9e-17]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=80.9, Expect=8e-16]; ENSMUSG00000002393, Nr2f6, nuclear receptor subfamily 2, group F, member 6, [Score=80.1, Expect=1e-15]} {Dmel: FBgn0003720, tll, tailless, [Score=82.4, Expect=3e-16]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=99.8, Expect=1e-21]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=91.3, Expect=2e-19]} {RNA1509_8358} {RNA1310_9876} {RNA815_22592}
6.	MligTC455_12304	42	0.87	Mlig455_070558	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_070558 {REF} {Length: 1968} {Pfam: Integrase core domain [PF00665.28, score=29.3]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.2, Expect=6e-11]} {RNA1509_21400} {RNA1310_37574} {RNA815_2733.1}
7.	MligTC455_46048	31	0.64	Mlig455_060908	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_060908 {REF} {Length: 4385} {RNA1509_22124} {RNA1310_13120} {RNA815_10355}
8.	MligTC455_34804	296	6.17	Mlig455_006896	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_006896 {REF} {Length: 7567} {TRANSSPLICED} {Smed: dd_Smed_v6_9784_0_3, dd_Smed_v6_9784_0_3, [RH, Score=75.9, Expect=2e-13]} {RNA1509_29125, RNA1509_4353} {RNA1310_2901, RNA1509_29125} {RNA1509_29125, RNA815_843}
9.	MligTC455_44678	1404	29.25	Mlig455_003572	Neo: - Age: logFC(26M/2M)=-0.384 Region-enriched R2: 1.099/0.01840	CATIP	0.957	0.957	-	-	-	-	-	Mlig455_003572 {REF} {Length: 2966} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=241, Expect=1e-75]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=202, Expect=5e-60]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=1e-101]} {RNA1509_33318, RNA1509_4430} {RNA1310_17964, RNA1509_33318, RNA1509_4430} {RNA1509_33318, RNA1509_4430, RNA815_14802}
10.	MligTC455_34641	301	6.27	Mlig455_027038	Neo: - Age: -	ATP2A1	0.955	0.955	-	-	-	-	-	Mlig455_027038 {REF} {Length: 4352} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=191.8]; Cation transporting ATPase, C-terminus [PF00689.23, score=146.4]; Cation transport ATPase (P-type) [PF13246.8, score=76.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=73.8]; Cation transporter/ATPase, N-terminus [PF00690.28, score=67.0]; haloacid dehalogenase-like hydrolase [PF12710.9, score=30.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=30.2]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1462, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1446, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1403, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1456, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1450, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1404, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1493, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1466, Expect=0.0]} {Smed: dd_Smed_v6_1772_0_1, dd_Smed_v6_1772_0_1, [RH, Score=1613, Expect=0.0]} {RNA1509_20343} {RNA1310_3029.1} {RNA815_2104.2}
11.	MligTC455_37422	424	8.84	Mlig455_046336, Mlig455_068232	Neo: - Age: -		0.953	0.953	-	-	-	-	-	Mlig455_046336 {REF} {Length: 2188} {RNA1509_23270, RNA1509_23548} {RNA1310_21891, RNA1509_23270, RNA1509_23548} {RNA1509_23270, RNA1509_23548, RNA815_2813.1} Mlig455_068232 {REF} {Length: 2388} {RNA1509_23548} {RNA1310_21891} {RNA815_2813.1}
12.	MligTC455_10954	78	1.63	Mlig455_012438	Neo: - Age: - Region-enriched R3: 4.055/0.01957 Region-enriched R5: 3.141/0.04481		0.95	-	-	-	-	0.950	-	Mlig455_012438 {REF} {Length: 1348} {RNA1509_16019, RNA1509_5205} {RNA1310_77099, RNA1509_16019, RNA1509_5205} {RNA1509_16019, RNA1509_5205, RNA815_481.1}

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