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Results for MligTC455_39676

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39676 240 5.00 Mlig455_026216

Neo: -

Age: -

 Mlig455_026216 {REF} {Length: 3752} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555, RNA1509_14473} {RNA1509_14473, RNA815_3996.1}

Cumulative graph for MligTC455_39676

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.739 2.953 0.33792 0.98402
RegionR2 1.327 2.953 0.18961 0.54469
RegionR3 0.522 2.953 0.57863 1.00000
RegionR4 1.787 2.953 0.06886 0.23950
RegionR5 0.937 2.953 0.26989 0.59425
RegionR6 0.596 2.953 0.53580 1.00000
RegionR7 -0.911 2.953 0.98446 1.00000
RegionR8 0.481 2.953 0.67350 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.619 2.953 0.99985 1.00000
RegenerationR2 0.858 2.953 0.11265 0.52355
RegenerationR3 0.428 2.953 0.52980 0.87163
RegenerationR4 -0.33 2.953 0.63896 0.92711
RegenerationR5 0.484 2.953 0.42027 0.81157
RegenerationR6 0.732 2.953 0.28517 0.63545
RegenerationBL 1.667 2.953 0.06424 0.29460
RegenerationTP 1.602 2.953 0.08550 0.46220


Genes with expression patterns similar to MligTC455_39676

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39676 240 5 Mlig455_026216

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_026216 {REF} {Length: 3752} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555, RNA1509_14473} {RNA1509_14473, RNA815_3996.1}
2. MligTC455_42531 336 7 Mlig455_030594

Neo: Int S/G2/M

Age: Down-Up-Up

 ABT1 1.697 - - 0.734 - 0.963 - Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694}
3. MligTC455_20745 401 8.36 Mlig455_030491

Neo: -

Age: -

 TNIK 1.694 - 0.724 - - - 0.970 Mlig455_030491 {REF} {Length: 5161} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=209.8]; CNH domain [PF00780.24, score=179.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.9]; ABC1 atypical kinase-like domain [PF03109.18, score=31.6]; Fungal protein kinase [PF17667.3, score=22.4]} {Human: ENSG00000154310, TNIK, TRAF2 and NCK interacting kinase, [RH, Score=501, Expect=2e-153]} {Mouse: ENSMUSG00000027692, Tnik, TRAF2 and NCK interacting kinase, [RH, Score=501, Expect=5e-154]; ENSMUSG00000020827, Mink1, misshapen-like kinase 1 (zebrafish), [RH, Score=476, Expect=1e-144]} {Dmel: FBgn0010909, msn, misshapen, [RH, Score=504, Expect=2e-153]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [RH, Score=502, Expect=1e-156]} {Smed: dd_Smed_v6_1029_0_1, dd_Smed_v6_1029_0_1, [RH, Score=442, Expect=8e-136]} {RNA1509_5951} {RNA1310_3546} {RNA815_5720.1}
4. MligTC455_26932 392 8.18 Mlig455_022715

Neo: -

Age: Up-Down-Down

 PKD1L1 0.968 - - - - 0.968 - Mlig455_022715 {REF} {Length: 13426} {TRANSSPLICED} {Pfam: PKD domain [PF18911.2, score=52.4]; REJ domain [PF02010.17, score=48.9]; GPCR proteolysis site, GPS, motif [PF01825.23, score=36.6]; PKD domain [PF00801.22, score=32.4]; PLAT/LH2 domain [PF01477.25, score=22.1]} {Human: ENSG00000158683, PKD1L1, polycystin 1 like 1, transient receptor potential channel interacting, [Score=92.0, Expect=2e-17]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=80.1, Expect=7e-14]; ENSMUSG00000048827, Pkd1l3, polycystic kidney disease 1 like 3, [Score=78.6, Expect=2e-13]; ENSMUSG00000046634, Pkd1l1, polycystic kidney disease 1 like 1, [Score=78.6, Expect=2e-13]} {Smed: dd_Smed_v6_15525_0_1, dd_Smed_v6_15525_0_1, [Score=60.8, Expect=2e-08]} {RNA1509_19421, RNA1509_23367, RNA1509_56277} {RNA1310_1465.1, RNA1509_23367, RNA1509_56277} {RNA1509_23367, RNA1509_56277, RNA815_1052}
5. MligTC455_40110 51 1.07 Mlig455_012268

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.939

Region-enriched R4: 3.986/0.02233

 TRPM3 0.968 - - 0.968 - - - Mlig455_012268 {REF} {Length: 5828} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=157.3]; Ankyrin repeats (many copies) [PF13637.8, score=111.0]; Ankyrin repeat [PF00023.32, score=78.1]; Ankyrin repeats (many copies) [PF13857.8, score=73.1]; Ankyrin repeat [PF13606.8, score=63.0]; Ion transport protein [PF00520.33, score=33.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=99.8, Expect=4e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=98.6, Expect=8e-20]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=98.6, Expect=9e-20]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=99.8, Expect=2e-20]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=99.4, Expect=3e-20]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=86.7, Expect=2e-16]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=72.8, Expect=2e-12]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=108, Expect=1e-23]} {RNA1509_31004} {RNA1310_1099, RNA1509_31004} {RNA1509_31004, RNA815_12106}
6. MligTC455_31527 139 2.9 Mlig455_005639, Mlig455_016710, Mlig455_020437, Mlig455_057295, Mlig455_057296

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.033

 SETMAR 0.957 - - 0.957 - - -

Mlig455_005639 {REF} {Length: 536} {Pfam: Helix-turn-helix domain [PF13518.8, score=33.0]; Winged helix-turn helix [PF13551.8, score=25.1]; Homeodomain-like domain [PF13565.8, score=23.5]; Transposase [PF01710.18, score=22.0]; Transposase [PF01527.22, score=20.1]; Homeodomain-like domain [PF13384.8, score=18.6]; Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=18.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=47.4, Expect=4e-06]} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1}

Mlig455_016710 {REF} {Length: 3859} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.7]; Helix-turn-helix domain [PF13518.8, score=28.1]; DDE superfamily endonuclease [PF13358.8, score=27.7]; Homeodomain-like domain [PF13565.8, score=21.8]; Transposase [PF01710.18, score=20.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_16239_0_3, dd_Smed_v6_16239_0_3, [Score=55.1, Expect=2e-08]} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1}

Mlig455_020437 {REF} {Length: 743} {Pfam: DDE superfamily endonuclease [PF13358.8, score=23.5]} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1}

Mlig455_057295 {REF} {Length: 539} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.7]; Helix-turn-helix domain [PF13518.8, score=28.1]; DDE superfamily endonuclease [PF13358.8, score=27.7]; Homeodomain-like domain [PF13565.8, score=21.8]; Transposase [PF01710.18, score=20.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_16239_0_3, dd_Smed_v6_16239_0_3, [Score=55.1, Expect=2e-08]} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1}

Mlig455_057296 {REF} {Length: 506} {Pfam: Helix-turn-helix domain [PF13518.8, score=31.0]; DDE superfamily endonuclease [PF13358.8, score=30.3]; Winged helix-turn helix [PF13551.8, score=22.7]; Homeodomain-like domain [PF13565.8, score=22.2]; Transposase [PF01710.18, score=21.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=57.8, Expect=5e-10]} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1}
7. MligTC455_39263 254 5.29 Mlig455_047907, Mlig455_047995

Neo: -

Age: Up-Down-Down

 NALCN 0.957 - - - - - 0.957

Mlig455_047907 {REF} {Length: 7344} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=414.2]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [RH, Score=1566, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [RH, Score=1570, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [RH, Score=1579, Expect=0.0]} {Celegans: WBGene00003558, nca-2, Four domain-type voltage-gated ion channel alpha-1 subunit; Novel Channel type/putative Nematode CAlcium channel, [RH, Score=1343, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [RH, Score=1756, Expect=0.0]} {RNA1509_7723} {RNA1310_7866.2, RNA1509_7723} {RNA1509_7723, RNA815_2697}

Mlig455_047995 {REF} {Length: 7874} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=413.4]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [RH, Score=1565, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [RH, Score=1568, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [RH, Score=1580, Expect=0.0]} {Celegans: WBGene00003558, nca-2, Four domain-type voltage-gated ion channel alpha-1 subunit; Novel Channel type/putative Nematode CAlcium channel, [RH, Score=1345, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [RH, Score=1756, Expect=0.0]} {RNA1509_38963, RNA1509_44333, RNA1509_7723} {RNA1310_7866.2, RNA1509_38963, RNA1509_44333} {RNA1509_38963, RNA1509_44333, RNA815_2697}
8. MligTC455_48802 5843 121.73 Mlig455_032960, Mlig455_041857

Neo: -

Age: -

 TIA1 0.95 - - - - 0.950 -

Mlig455_032960 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.4]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=1e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=9e-63]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=201, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919} {RNA1310_13972.1} {RNA815_6386.1}

Mlig455_041857 {REF} {Length: 1684} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.3]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=2e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=1e-62]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=202, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1310_13972.1, RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558, RNA815_6386.1}

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