Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_48802 | 5843 | 121.73 | Mlig455_032960, Mlig455_041857 | Neo: - Age: - |
TIA1 | Mlig455_032960 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.4]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=1e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=9e-63]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=201, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919} {RNA1310_13972.1} {RNA815_6386.1} Mlig455_041857 {REF} {Length: 1684} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.3]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=2e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=1e-62]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=202, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1310_13972.1, RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558, RNA815_6386.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.244 | 6.957 | 0.58011 | 1.00000 | |
RegionR2 | -0.045 | 6.957 | 0.86140 | 1.00000 | |
RegionR3 | -0.47 | 6.957 | 0.03572 | 0.32826 | |
RegionR4 | 0.373 | 6.957 | 0.13866 | 0.37965 | |
RegionR5 | 0.041 | 6.957 | 0.84417 | 1.00000 | |
RegionR6 | -0.032 | 6.957 | 0.88558 | 1.00000 | |
RegionR7 | 0.532 | 6.957 | 0.02176 | 0.27455 | |
RegionR8 | -0.155 | 6.957 | 0.60613 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.151 | 6.957 | 0.79544 | 1.00000 | |
RegenerationR2 | 0.121 | 6.957 | 0.63861 | 0.93077 | |
RegenerationR3 | 0.398 | 6.957 | 0.15052 | 0.57964 | |
RegenerationR4 | 0.007 | 6.957 | 0.97949 | 1.00000 | |
RegenerationR5 | 0.247 | 6.957 | 0.34727 | 0.76197 | |
RegenerationR6 | 0.531 | 6.957 | 0.04884 | 0.27626 | |
RegenerationBL | 0.245 | 6.957 | 0.33873 | 0.70527 | |
RegenerationTP | -0.111 | 6.957 | 0.69594 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_48802 | 5843 | 121.73 | Mlig455_032960, Mlig455_041857 | Neo: - Age: - |
TIA1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032960 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.4]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=1e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=9e-63]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=201, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919} {RNA1310_13972.1} {RNA815_6386.1} Mlig455_041857 {REF} {Length: 1684} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=157.9]; RNA recognition motif [PF16367.7, score=37.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=26.6]; Occluded RNA-recognition motif [PF16842.7, score=20.7]; RNA binding motif [PF08777.13, score=19.3]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=210, Expect=2e-63]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=202, Expect=1e-60]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=207, Expect=1e-62]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=202, Expect=2e-60]} {Dmel: FBgn0005649, Rox8, [RH, Score=214, Expect=2e-64]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=194, Expect=1e-57]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [RH, Score=212, Expect=5e-65]} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1310_13972.1, RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558} {RNA1509_19919, RNA1509_26972, RNA1509_3206, RNA1509_40558, RNA815_6386.1} |
2. | MligTC455_50529 | 987 | 20.57 | Mlig455_017364 | Neo: - Age: Up-Up-Down |
1.788 | - | - | - | - | 0.963 | 0.825 | Mlig455_017364 {REF} {Length: 724} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885} | |
3. | MligTC455_41150 | 741 | 15.45 | Mlig455_036762 | Neo: - Age: - Region-enriched R4: 1.167/0.03671 |
ANK1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_036762 {REF} {Length: 3940} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=62.1]; Ankyrin repeats (3 copies) [PF12796.9, score=57.9]; Ankyrin repeat [PF13606.8, score=49.8]; Ankyrin repeats (many copies) [PF13857.8, score=47.6]; Ankyrin repeat [PF00023.32, score=45.4]; Glycosyl hydrolase family 20, domain 2 [PF02838.17, score=26.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=62.8, Expect=3e-09]; ENSG00000145362, ANK2, ankyrin 2, [Score=60.5, Expect=1e-08]; ENSG00000177981, ASB8, ankyrin repeat and SOCS box containing 8, [Score=59.7, Expect=6e-09]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=60.8, Expect=7e-09]; ENSMUSG00000048175, Asb8, ankyrin repeat and SOCS box-containing 8, [Score=59.7, Expect=4e-09]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=59.7, Expect=2e-08]; ENSMUSG00000027157, 4930430A15Rik, RIKEN cDNA 4930430A15 gene, [Score=59.3, Expect=1e-08]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=53.9, Expect=8e-07]} {Celegans: WBGene00011802, T16G1.9, [RH, Score=95.5, Expect=7e-20]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=59.3, Expect=1e-08]} {RNA1509_11008} {RNA1310_6501.1, RNA1509_11008} {RNA1509_11008, RNA815_2040} |
4. | MligTC455_39676 | 240 | 5 | Mlig455_026216 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_026216 {REF} {Length: 3752} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555, RNA1509_14473} {RNA1509_14473, RNA815_3996.1} |