Data search
Results for MligTC455_39848
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39848 | 56 | 1.17 | Mlig455_054043 | Neo: - Age: Up-Up-Down Regeneration-upregulated R2: 5.237 Regeneration-enriched R2: 5.237 |
Mlig455_054043 {REF} {Length: 1977} {RNA1509_56874} {RNA1310_21214, RNA1509_56874} {RNA1509_56874, RNA815_34869} |
Cumulative graph for MligTC455_39848
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 3.543 | 1.333 | 0.10232 | 0.67360 | |
| RegionR2 | -1.977 | 1.333 | 0.99956 | 1.00000 | |
| RegionR3 | 1.306 | 1.333 | 0.17394 | 0.70055 | |
| RegionR4 | 0.014 | 1.333 | 0.53279 | 0.85632 | |
| RegionR5 | 0.848 | 1.333 | 0.25958 | 0.58002 | |
| RegionR6 | 0.805 | 1.333 | 0.34890 | 0.93420 | |
| RegionR7 | -2.286 | 1.333 | 0.99966 | 1.00000 | |
| RegionR8 | -2.253 | 1.333 | 0.99954 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.263 | 1.333 | 0.36254 | 1.00000 | |
| RegenerationR2 | 5.237 | 1.333 | 0.00004 | 0.00711 | Specific for R2: 5.237 |
| RegenerationR3 | 1.809 | 1.333 | 0.11576 | 0.53072 | |
| RegenerationR4 | 1.454 | 1.333 | 0.21410 | 0.66039 | |
| RegenerationR5 | 0.559 | 1.333 | 0.59121 | 0.90612 | |
| RegenerationR6 | 1.67 | 1.333 | 0.18637 | 0.52273 | |
| RegenerationBL | 4.234 | 1.333 | 0.01959 | 0.15105 | |
| RegenerationTP | 4.418 | 1.333 | 0.08292 | 0.45649 |
Genes with expression patterns similar to MligTC455_39848
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39848 | 56 | 1.17 | Mlig455_054043 | Neo: - Age: Up-Up-Down Regeneration-upregulated R2: 5.237 Regeneration-enriched R2: 5.237 |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_054043 {REF} {Length: 1977} {RNA1509_56874} {RNA1310_21214, RNA1509_56874} {RNA1509_56874, RNA815_34869} | |
| 2. | MligTC455_49308 | 26 | 0.55 | Mlig455_055283 | Neo: - Age: - |
ZAN | 1.839 | - | - | - | 0.878 | - | 0.961 | Mlig455_055283 {REF} {Length: 2486} {Pfam: Glycine rich protein [PF12810.9, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=65.1, Expect=4e-10]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=61.6, Expect=3e-09]} {Dmel: FBgn0053196, dpy, dumpy, [Score=51.6, Expect=3e-06]} {RNA1310_18897} {RNA815_40026} |
| 3. | MligTC455_12336 | 20 | 0.41 | Mlig455_021296 | Neo: - Age: - |
1.75 | - | - | - | - | 0.756 | 0.994 | Mlig455_021296 {REF} {Length: 479} {NoTransDecoderORF} | |
| 4. | MligTC455_26939 | 72 | 1.49 | Mlig455_033291 | Neo: - Age: - |
0.979 | - | - | - | - | - | 0.979 | Mlig455_033291 {REF} {Length: 6212} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.0]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=4e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1} | |
| 5. | MligTC455_57726 | 39 | 0.82 | Mlig455_030142 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_030142 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_117714} | |
| 6. | MligTC455_19450 | 194 | 4.05 | Mlig455_065775, Mlig455_065798 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_065775 {REF} {Length: 1864} {Pfam: Innexin [PF00876.20, score=26.9]} {RNA1509_47060} {RNA1310_19756.1} {RNA815_16217} Mlig455_065798 {REF} {Length: 1809} {Pfam: Innexin [PF00876.20, score=26.9]} {RNA1509_47060} {RNA1310_19756.1} {RNA815_16217} |
|
| 7. | MligTC455_42911 | 64 | 1.33 | Mlig455_006347, Mlig455_061245 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_006347 {REF} {Length: 1191} {RNA1310_18511} {RNA815_34926} Mlig455_061245 {REF} {Length: 1944} {RNA1310_18511} {RNA815_34926} |
|
| 8. | MligTC455_43394 | 37 | 0.78 | Mlig455_036609 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_036609 {REF} {Length: 213} {NoTransDecoderORF} {RNA1310_36062} {RNA815_46858} | |
| 9. | MligTC455_32142 | 40 | 0.84 | Mlig455_006350 | Neo: - |
TRPM7 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_006350 {REF} {Length: 5802} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=55.9]; Ankyrin repeats (3 copies) [PF12796.9, score=45.8]; Ankyrin repeat [PF13606.8, score=32.5]; Ankyrin repeats (many copies) [PF13857.8, score=28.5]; Ankyrin repeat [PF00023.32, score=25.7]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=104, Expect=1e-21]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=102, Expect=6e-21]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=4e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=3e-20]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=104, Expect=7e-22]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=103, Expect=1e-21]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=103, Expect=1e-21]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=92.4, Expect=2e-18]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=77.8, Expect=5e-14]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=1e-27]} {RNA1509_29775} {RNA1310_1317} {RNA815_8567} |
| 10. | MligTC455_42910 | 32 | 0.67 | Mlig455_006397 | Neo: - Age: logFC(26M/2M)=-0.359 |
ANK1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_006397 {REF} {Length: 4067} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=209.4]; Ankyrin repeats (many copies) [PF13637.8, score=160.1]; Ankyrin repeat [PF13606.8, score=136.2]; Ankyrin repeats (many copies) [PF13857.8, score=125.6]; Ankyrin repeat [PF00023.32, score=124.1]; Mab-21 protein [PF03281.16, score=28.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=186, Expect=7e-47]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=179, Expect=1e-44]} {Dmel: FBgn0039590, CG10011, [Score=174, Expect=3e-43]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=153, Expect=3e-37]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=168, Expect=6e-42]} {RNA1509_38396} {RNA1310_3944.1} {RNA815_1969} |
| 11. | MligTC455_48792 | 145 | 3.02 | Mlig455_049885 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_049885 {REF} {Length: 1335} {RNA1509_59166} {RNA1310_26794.2} {RNA815_13204} | |
| 12. | MligTC455_13512 | 156 | 3.24 | Mlig455_020307 | Neo: - Age: - |
CNGA3 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_020307 {REF} {Length: 3017} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=63.0]; Ion transport protein [PF00520.33, score=56.3]} {Human: ENSG00000144191, CNGA3, cyclic nucleotide gated channel alpha 3, [Score=430, Expect=3e-138]; ENSG00000183862, CNGA2, cyclic nucleotide gated channel alpha 2, [Score=412, Expect=6e-132]; ENSG00000198515, CNGA1, cyclic nucleotide gated channel alpha 1, [Score=412, Expect=2e-131]} {Mouse: ENSMUSG00000026114, Cnga3, cyclic nucleotide gated channel alpha 3, [Score=414, Expect=6e-133]; ENSMUSG00000067220, Cnga1, cyclic nucleotide gated channel alpha 1, [Score=410, Expect=6e-131]; ENSMUSG00000005864, Cnga2, cyclic nucleotide gated channel alpha 2, [Score=402, Expect=3e-128]} {Dmel: FBgn0259145, CG42260, [RH, Score=652, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=352, Expect=7e-109]} {Smed: dd_Smed_v6_22398_0_1, dd_Smed_v6_22398_0_1, [Score=404, Expect=1e-129]} {RNA1509_58266} {RNA1310_19338} {RNA815_12776} |
| 13. | MligTC455_50422 | 125 | 2.6 | Mlig455_014719 | Neo: - Age: - Region-enriched R2: 3.621/0.01085 |
GALNT1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_014719 {REF} {Length: 2844} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=108.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=19.9]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=328, Expect=8e-108]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=320, Expect=1e-102]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=328, Expect=7e-106]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=320, Expect=9e-103]} {Dmel: FBgn0050463, CG30463, [Score=349, Expect=3e-113]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=359, Expect=2e-117]} {Smed: dd_Smed_v6_4615_0_1, dd_Smed_v6_4615_0_1, [Score=379, Expect=3e-125]} {RNA1509_29632} {RNA1310_10752} {RNA815_14192.1} |
| 14. | MligTC455_34488 | 72 | 1.5 | Mlig455_051688 | Neo: - Age: - |
DAG1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_051688 {REF} {Length: 4571} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=47.3]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=31.6]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=61.2, Expect=1e-08]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=82.8, Expect=8e-16]} {RNA1509_57075} {RNA1310_1596.1, RNA1509_57075} {RNA1509_57075, RNA815_7113} |
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