TomoSeq data search

Data search

Results for MligTC455_39852

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39852

874

18.22

Mlig455_033537

Neo: -

Age: -

METTL3

Mlig455_033537 {REF} {Length: 3271} {TRANSSPLICED} {Pfam: MT-A70 [PF05063.16, score=188.3]} {Human: ENSG00000165819, METTL3, methyltransferase like 3, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000022160, Mettl3, methyltransferase like 3, [RH, Score=506, Expect=4e-174]} {Dmel: FBgn0039139, Ime4, Inducer of meiosis 4, [RH, Score=486, Expect=1e-165]} {Smed: dd_Smed_v6_6450_0_2, dd_Smed_v6_6450_0_2, [RH, Score=526, Expect=0.0]} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1310_7297, RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966, RNA815_4864}

Cumulative graph for MligTC455_39852

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.987	4.492	0.29271	0.94460
RegionR2	0.252	4.492	0.55958	0.92204
RegionR3	-0.058	4.492	0.87302	1.00000
RegionR4	0.24	4.492	0.55105	0.87148
RegionR5	0.685	4.492	0.02905	0.12662
RegionR6	0.422	4.492	0.22912	0.81243
RegionR7	-0.237	4.492	0.59405	1.00000
RegionR8	-0.316	4.492	0.54435	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.96	4.492	0.08657	0.79012
RegenerationR2	-0.11	4.492	0.77020	0.98049
RegenerationR3	-0.014	4.492	0.97266	1.00000
RegenerationR4	-0.118	4.492	0.77957	0.98018
RegenerationR5	-0.528	4.492	0.16184	0.58593
RegenerationR6	-0.266	4.492	0.51896	0.81988
RegenerationBL	-0.267	4.492	0.58600	0.93673
RegenerationTP	0.116	4.492	0.82247	1.00000

Genes with expression patterns similar to MligTC455_39852

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39852	874	18.22	Mlig455_033537	Neo: - Age: -	METTL3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033537 {REF} {Length: 3271} {TRANSSPLICED} {Pfam: MT-A70 [PF05063.16, score=188.3]} {Human: ENSG00000165819, METTL3, methyltransferase like 3, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000022160, Mettl3, methyltransferase like 3, [RH, Score=506, Expect=4e-174]} {Dmel: FBgn0039139, Ime4, Inducer of meiosis 4, [RH, Score=486, Expect=1e-165]} {Smed: dd_Smed_v6_6450_0_2, dd_Smed_v6_6450_0_2, [RH, Score=526, Expect=0.0]} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1310_7297, RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966, RNA815_4864}
2.	MligTC455_38540	303	6.32	Mlig455_060217	Neo: - Age: - Region-enriched R5: 2.468/0.00715		2.451	-	-	0.958	-	0.729	0.764	Mlig455_060217 {REF} {Length: 1501} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=53.7]} {RNA1509_22974} {RNA1310_35264} {RNA815_10669}
3.	MligTC455_35785	318	6.63	Mlig455_034477	Neo: - Age: -	MLXIP	0.978	-	-	-	-	0.978	-	Mlig455_034477 {REF} {Length: 3124} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.1]} {Human: ENSG00000281178, MLXIP, MLX interacting protein, [Score=135, Expect=4e-32]; ENSG00000175727, MLXIP, MLX interacting protein, [Score=135, Expect=4e-32]; ENSG00000009950, MLXIPL, MLX interacting protein like, [Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000038342, Mlxip, MLX interacting protein, [Score=132, Expect=2e-31]; ENSMUSG00000005373, Mlxipl, MLX interacting protein-like, [Score=127, Expect=4e-30]} {Dmel: FBgn0032940, Mondo, [Score=142, Expect=3e-34]} {Celegans: WBGene00003378, mml-1, Protein WBSCR14 homolog, [Score=108, Expect=4e-24]} {Smed: dd_Smed_v6_9226_0_1, dd_Smed_v6_9226_0_1, [Score=132, Expect=1e-31]} {RNA1509_19256} {RNA1310_13653} {RNA815_5563}
4.	MligTC455_34023	416	8.66	Mlig455_047921	Neo: - Age: -	TMEM259	0.975	-	-	-	-	-	0.975	Mlig455_047921 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Tumour-associated protein [PF09746.11, score=416.6]; Anti-sigma-K factor rskA [PF10099.11, score=27.9]} {Human: ENSG00000182087, TMEM259, transmembrane protein 259, [RH, Score=363, Expect=7e-118]} {Mouse: ENSMUSG00000013858, Tmem259, transmembrane protein 259, [RH, Score=358, Expect=1e-116]} {Dmel: FBgn0034071, CG8405, [RH, Score=365, Expect=3e-115]} {Celegans: WBGene00021985, Y59C2A.2, [RH, Score=232, Expect=2e-68]} {Smed: dd_Smed_v6_6306_0_1, dd_Smed_v6_6306_0_1, [RH, Score=464, Expect=2e-154]} {RNA1509_33729, RNA1509_57346} {RNA1310_8329.1, RNA1509_57346} {RNA1509_57346, RNA815_985}
5.	MligTC455_20761	639	13.32	Mlig455_008407	Neo: - Age: Up-Down-Down Region-enriched R5: 1.193/0.02263		0.954	-	-	0.954	-	-	-	Mlig455_008407 {REF} {Length: 4281} {Pfam: Bivalent Mical/EHBP Rab binding domain [PF12130.10, score=34.4]} {Mouse: ENSMUSG00000051586, Mical3, microtubule associated monooxygenase, calponin and LIM domain containing 3, [Score=54.7, Expect=3e-07]} {RNA1509_14652} {RNA1310_20788.1} {RNA815_4495}
6.	MligTC455_27660	736	15.33	Mlig455_064735	Neo: - Age: -	COQ3	0.951	-	-	0.951	-	-	-	Mlig455_064735 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1, RNA1509_44835} {RNA1509_44835, RNA815_12330}

Berezikov Lab - 2020-2021 © ERIBA