Data search
Results for MligTC455_27660
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27660 | 736 | 15.33 | Mlig455_064735 | Neo: - Age: - |
COQ3 | Mlig455_064735 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1, RNA1509_44835} {RNA1509_44835, RNA815_12330} |
Cumulative graph for MligTC455_27660
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.102 | 4.218 | 0.23279 | 0.87520 | |
| RegionR2 | 0.921 | 4.218 | 0.02631 | 0.18225 | |
| RegionR3 | 0.221 | 4.218 | 0.49375 | 0.99072 | |
| RegionR4 | -0.845 | 4.218 | 0.02931 | 0.13367 | |
| RegionR5 | 0.07 | 4.218 | 0.80998 | 1.00000 | |
| RegionR6 | 0.189 | 4.218 | 0.57301 | 1.00000 | |
| RegionR7 | 1.001 | 4.218 | 0.01233 | 0.19536 | |
| RegionR8 | -0.455 | 4.218 | 0.47806 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.008 | 4.218 | 0.09779 | 0.81473 | |
| RegenerationR2 | -0.241 | 4.218 | 0.48790 | 0.86686 | |
| RegenerationR3 | -0.203 | 4.218 | 0.60444 | 0.90970 | |
| RegenerationR4 | 0.422 | 4.218 | 0.27087 | 0.71684 | |
| RegenerationR5 | -0.119 | 4.218 | 0.73289 | 0.96501 | |
| RegenerationR6 | 0.8 | 4.218 | 0.03534 | 0.23551 | |
| RegenerationBL | 0.869 | 4.218 | 0.05302 | 0.26603 | |
| RegenerationTP | 0.136 | 4.218 | 0.80105 | 1.00000 |
Genes with expression patterns similar to MligTC455_27660
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27660 | 736 | 15.33 | Mlig455_064735 | Neo: - Age: - |
COQ3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064735 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1, RNA1509_44835} {RNA1509_44835, RNA815_12330} |
| 2. | MligTC455_26226 | 1224 | 25.49 | Mlig455_012413 | Neo: Int S/G2/M Age: - |
MYDGF | 1.761 | - | - | - | 0.769 | 0.992 | - | Mlig455_012413 {REF} {Length: 1598} {Pfam: UPF0556 domain [PF10572.11, score=137.9]} {Human: ENSG00000074842, MYDGF, myeloid derived growth factor, [RH, Score=79.3, Expect=1e-18]} {Mouse: ENSMUSG00000019579, Mydgf, myeloid derived growth factor, [RH, Score=84.0, Expect=1e-20]} {Smed: dd_Smed_v6_5539_0_1, dd_Smed_v6_5539_0_1, [RH, Score=137, Expect=5e-42]} {RNA1509_38000, RNA1509_42028, RNA1509_47721, RNA1509_48001} {RNA1310_23501.1, RNA1509_38000, RNA1509_42028, RNA1509_47721, RNA1509_48001} {RNA1509_38000, RNA1509_42028, RNA1509_47721, RNA1509_48001, RNA815_8862.1} |
| 3. | MligTC455_26264 | 329 | 6.86 | Mlig455_062063 | Neo: - Age: Down-Down-Down Region-enriched R5: 1.702/0.03238 |
NR1I3 | 1.689 | - | - | 0.951 | 0.738 | - | - | Mlig455_062063 {REF} {Length: 4111} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_9731.1} {RNA815_11206} |
| 4. | MligTC455_47757 | 11197 | 233.28 | Mlig455_053974 | Neo: - Age: - Regeneration-downregulated R6: -2.258 Regeneration-depleted R6: -2.258 |
0.968 | - | - | - | - | 0.968 | - | Mlig455_053974 {REF} {Length: 519} {RNA1509_19736, RNA1509_22876} {RNA1310_75882, RNA1509_22876} {RNA1509_22876, RNA815_24456} | |
| 5. | MligTC455_30078 | 422 | 8.8 | Mlig455_035919 | Neo: - Age: - |
SEMA3E | 0.967 | - | - | 0.967 | - | - | - | Mlig455_035919 {REF} {Length: 4961} {TRANSSPLICED} {Pfam: Sema domain [PF01403.21, score=72.0]} {Human: ENSG00000170381, SEMA3E, semaphorin 3E, [Score=77.4, Expect=5e-14]; ENSG00000187764, SEMA4D, semaphorin 4D, [Score=75.1, Expect=3e-13]} {Mouse: ENSMUSG00000063531, Sema3e, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E, [Score=75.9, Expect=1e-13]} {Celegans: WBGene00004890, smp-2, SeMaPhorin related, [Score=52.8, Expect=9e-07]} {Smed: dd_Smed_v6_12018_0_1, dd_Smed_v6_12018_0_1, [RH, Score=52.4, Expect=8e-07]} {RNA1310_11198} {RNA815_5413} |
| 6. | MligTC455_25471 | 545 | 11.35 | Mlig455_021774 | Neo: - Age: Up-Down-Down |
0.964 | - | - | 0.964 | - | - | - | Mlig455_021774 {REF} {Length: 4546} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=18.1]} {RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1310_4091.1, RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1509_21568, RNA1509_33358, RNA1509_36305, RNA815_163.1} | |
| 7. | MligTC455_31990 | 61 | 1.28 | Mlig455_070961 | Neo: - Age: Down-Up-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_070961 {REF} {Length: 873} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110} | |
| 8. | MligTC455_33768 | 422 | 8.79 | Mlig455_016905 | Neo: - Age: - |
ZNF235 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_016905 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=168.7]; Zinc finger, C2H2 type [PF00096.28, score=112.8]; C2H2-type zinc finger [PF13894.8, score=95.0]; C2H2-type zinc finger [PF13912.8, score=55.9]; Zinc-finger of C2H2 type [PF12874.9, score=55.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=42.9]; Family of unknown function (DUF5810) [PF19126.2, score=27.0]; KIAA1045 RING finger [PF16744.7, score=26.1]; AN1-like Zinc finger [PF01428.18, score=25.7]; BolA-like protein [PF01722.20, score=24.6]; Zinc-finger domain [PF10276.11, score=23.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.9]; Zinc ribbon domain [PF09723.12, score=20.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.7]} {Human: ENSG00000159917, ZNF235, zinc finger protein 235, [Score=227, Expect=4e-68]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=223, Expect=4e-65]; ENSG00000185869, ZNF829, zinc finger protein 829, [Score=223, Expect=4e-69]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=223, Expect=7e-69]; ENSG00000198315, ZKSCAN8, zinc finger with KRAB and SCAN domains 8, [Score=220, Expect=9e-67]; ENSG00000197360, ZNF98, zinc finger protein 98, [Score=220, Expect=9e-67]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=220, Expect=2e-66]; ENSG00000196267, ZNF836, zinc finger protein 836, [Score=219, Expect=5e-64]; ENSG00000198464, ZNF480, zinc finger protein 480, [Score=219, Expect=5e-67]; ENSG00000283201, AC092329.3, novel protein, [Score=218, Expect=1e-66]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=218, Expect=1e-63]; ENSG00000213793, ZNF888, zinc finger protein 888, [Score=218, Expect=7e-65]; ENSG00000213967, ZNF726, zinc finger protein 726, [Score=218, Expect=2e-65]; ENSG00000197372, ZNF675, zinc finger protein 675, [Score=217, Expect=1e-65]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=217, Expect=1e-64]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=217, Expect=3e-68]; ENSG00000167637, ZNF283, zinc finger protein 283, [Score=217, Expect=8e-65]; ENSG00000213799, ZNF845, zinc finger protein 845, [Score=216, Expect=4e-63]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=216, Expect=3e-63]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=216, Expect=1e-64]; ENSG00000170949, ZNF160, zinc finger protein 160, [Score=216, Expect=1e-63]; ENSG00000197016, ZNF470, zinc finger protein 470, [Score=216, Expect=4e-64]; ENSG00000196172, ZNF681, zinc finger protein 681, [Score=216, Expect=1e-64]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=216, Expect=5e-65]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=216, Expect=4e-64]} {Mouse: ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=222, Expect=9e-67]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=222, Expect=1e-67]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=221, Expect=2e-66]; ENSMUSG00000055150, Zfp78, zinc finger protein 78, [Score=221, Expect=3e-68]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=220, Expect=1e-67]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=219, Expect=8e-67]; ENSMUSG00000063894, Zkscan8, zinc finger with KRAB and SCAN domains 8, [Score=216, Expect=4e-65]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=216, Expect=2e-65]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=214, Expect=2e-64]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=213, Expect=1e-63]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=213, Expect=2e-62]; ENSMUSG00000067942, Zfp160, zinc finger protein 160, [Score=213, Expect=9e-64]; ENSMUSG00000078768, Zfp566, zinc finger protein 566, [Score=212, Expect=1e-65]; ENSMUSG00000052675, Zfp112, zinc finger protein 112, [Score=212, Expect=4e-62]; ENSMUSG00000078869, Gm14409, predicted gene 14409, [Score=211, Expect=7e-66]; ENSMUSG00000062743, Zfp677, zinc finger protein 677, [Score=211, Expect=5e-63]} {Dmel: FBgn0032979, Clamp, Chromatin-linked adaptor for MSL proteins, [Score=173, Expect=2e-49]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=150, Expect=4e-44]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=155, Expect=1e-44]} {RNA1509_12248, RNA1509_58031} {RNA1310_9881.1, RNA1509_58031} {RNA1509_58031, RNA815_18450.1} |
| 9. | MligTC455_49615 | 1273 | 26.51 | Mlig455_029719, Mlig455_034865 | Neo: - Age: logFC(26M/2M)=0.276 Regeneration-upregulated BL: 3.129 Regeneration-enriched BL: 3.129 |
SHOC2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_029719 {REF} {Length: 3635} {Pfam: Leucine rich repeat [PF13855.8, score=213.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=106.0]; Leucine Rich Repeat [PF00560.35, score=35.5]; Leucine-rich repeat [PF14580.8, score=32.1]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=22.9]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=380, Expect=6e-124]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=379, Expect=2e-123]} {Dmel: FBgn0038504, Sur-8, [Score=403, Expect=3e-132]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=359, Expect=3e-116]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=351, Expect=5e-113]} {RNA1509_12617, RNA1509_35671} {RNA1310_9871.1, RNA1509_12617, RNA1509_35671} {RNA1509_12617, RNA1509_35671, RNA815_10195} Mlig455_034865 {REF} {Length: 3049} {Pfam: Leucine rich repeat [PF13855.8, score=181.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=93.1]; Leucine-rich repeat [PF14580.8, score=36.5]; Leucine Rich Repeat [PF00560.35, score=32.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=25.7]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=270, Expect=4e-85]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=270, Expect=3e-85]} {Dmel: FBgn0038504, Sur-8, [Score=286, Expect=7e-91]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=249, Expect=1e-77]} {Smed: dd_Smed_v6_6416_0_1, dd_Smed_v6_6416_0_1, [Score=260, Expect=1e-81]} {RNA1509_12617} {RNA1310_9871.2} {RNA815_10195} |
| 10. | MligTC455_08171 | 40 | 0.83 | Mlig455_026527, Mlig455_032833 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_026527 {REF} {Length: 198} {NoTransDecoderORF} {RNA1310_39508} Mlig455_032833 {REF} {Length: 268} {NoTransDecoderORF} {RNA1310_39508} |
|
| 11. | MligTC455_24450 | 277 | 5.77 | Mlig455_034611 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_034611 {REF} {Length: 1827} {RNA1509_35741} {RNA1310_52741, RNA1509_35741} {RNA1509_35741, RNA815_31821} | |
| 12. | MligTC455_39852 | 874 | 18.22 | Mlig455_033537 | Neo: - Age: - |
METTL3 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_033537 {REF} {Length: 3271} {TRANSSPLICED} {Pfam: MT-A70 [PF05063.16, score=188.3]} {Human: ENSG00000165819, METTL3, methyltransferase like 3, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000022160, Mettl3, methyltransferase like 3, [RH, Score=506, Expect=4e-174]} {Dmel: FBgn0039139, Ime4, Inducer of meiosis 4, [RH, Score=486, Expect=1e-165]} {Smed: dd_Smed_v6_6450_0_2, dd_Smed_v6_6450_0_2, [RH, Score=526, Expect=0.0]} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1310_7297, RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966} {RNA1509_30668, RNA1509_49253, RNA1509_52441, RNA1509_7966, RNA815_4864} |
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