Data search
Results for MligTC455_40010
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40010 | 229 | 4.77 | Mlig455_068323 | Neo: - |
C12orf56 | Mlig455_068323 {REF} {Length: 3192} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=58.3]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.6, Expect=1e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=7e-06]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} |
Cumulative graph for MligTC455_40010
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.364 | 2.704 | 0.82398 | 1.00000 | |
| RegionR2 | 1.607 | 2.704 | 0.01776 | 0.14224 | |
| RegionR3 | 0.61 | 2.704 | 0.25228 | 0.79652 | |
| RegionR4 | -0.885 | 2.704 | 0.17461 | 0.44049 | |
| RegionR5 | -1.01 | 2.704 | 0.07319 | 0.24575 | |
| RegionR6 | 1.06 | 2.704 | 0.04901 | 0.41441 | |
| RegionR7 | 0.531 | 2.704 | 0.46034 | 1.00000 | |
| RegionR8 | -1.55 | 2.704 | 0.21194 | 0.81608 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.974 | 2.704 | 0.36967 | 1.00000 | |
| RegenerationR2 | 0.005 | 2.704 | 0.98683 | 1.00000 | |
| RegenerationR3 | 0.285 | 2.704 | 0.61425 | 0.91453 | |
| RegenerationR4 | 0.56 | 2.704 | 0.37732 | 0.79947 | |
| RegenerationR5 | 0.572 | 2.704 | 0.33078 | 0.75217 | |
| RegenerationR6 | -0.802 | 2.704 | 0.19264 | 0.53157 | |
| RegenerationBL | 0.401 | 2.704 | 0.64826 | 0.98545 | |
| RegenerationTP | -1.391 | 2.704 | 0.32125 | 0.76591 |
Genes with expression patterns similar to MligTC455_40010
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40010 | 229 | 4.77 | Mlig455_068323 | Neo: - |
C12orf56 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068323 {REF} {Length: 3192} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=58.3]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.6, Expect=1e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=7e-06]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} |
| 2. | MligTC455_40009 | 465 | 9.69 | Mlig455_007292, Mlig455_007306 | Neo: - Age: - Region-enriched R2: 1.847/0.04615 |
C12orf56 | 5.907 | 0.998 | 1.000 | 0.998 | 0.979 | 0.932 | 1.000 | Mlig455_007292 {REF} {Length: 3480} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.8]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=48.9, Expect=1e-05]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} Mlig455_007306 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.6]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=8e-06]} {RNA1509_56187, RNA1509_59782} {RNA1310_13327.1, RNA1509_56187, RNA1509_59782} {RNA1509_56187, RNA1509_59782, RNA815_13535} |
| 3. | MligTC455_30924 | 210 | 4.37 | Mlig455_026696 | Neo: Irradiation Age: Up-Down-Down |
PACS2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_026696 {REF} {Length: 5099} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=216.4]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [RH, Score=149, Expect=4e-36]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=144, Expect=1e-34]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=133, Expect=3e-31]} {Celegans: WBGene00044077, tag-232, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [RH, Score=141, Expect=3e-34]} {RNA1509_39289} {RNA1310_4400.1} {RNA815_4629.1} |
| 4. | MligTC455_23597 | 83 | 1.72 | Mlig455_024853 | Neo: - Age: - |
FAT4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_024853 {REF} {Length: 3518} {Pfam: Cadherin domain [PF00028.19, score=116.6]; Cadherin-like [PF16184.7, score=29.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=127, Expect=4e-29]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=124, Expect=5e-28]; ENSG00000120327, PCDHB14, protocadherin beta 14, [Score=122, Expect=5e-28]; ENSG00000120322, PCDHB8, protocadherin beta 8, [Score=121, Expect=2e-27]} {Mouse: ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=137, Expect=2e-32]} {Dmel: FBgn0038439, Cad89D, Cadherin 89D, [Score=164, Expect=7e-41]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=122, Expect=5e-28]} {Smed: dd_Smed_v6_14317_0_1, dd_Smed_v6_14317_0_1, [Score=117, Expect=1e-26]} {RNA1509_18837} {RNA1310_7055.1} {RNA815_6037} |
| 5. | MligTC455_20352 | 95 | 1.97 | Mlig455_015350, Mlig455_024908 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_015350 {REF} {Length: 3540} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1} Mlig455_024908 {REF} {Length: 559} {NoTransDecoderORF} {RNA1509_36887} {RNA1310_33640.1} {RNA815_52930} |
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