TomoSeq data search

Data search

Results for MligTC455_40122

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40122	232	4.84	Mlig455_004376	Neo: - Age: -		Mlig455_004376 {REF} {Length: 8635} {RNA1509_13095, RNA1509_14997} {RNA1310_3762, RNA1509_13095, RNA1509_14997} {RNA1509_13095, RNA1509_14997, RNA815_8206}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40122

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.166	2.752	0.36781	1.00000
RegionR2	0.863	2.752	0.24572	0.62263
RegionR3	-1.271	2.752	0.02446	0.26702
RegionR4	-0.879	2.752	0.24497	0.54333
RegionR5	-0.076	2.752	0.84447	1.00000
RegionR6	-0.306	2.752	0.56790	1.00000
RegionR7	-0.82	2.752	0.36853	1.00000
RegionR8	1.324	2.752	0.09377	0.57782

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.894	2.752	0.23608	0.96566
RegenerationR2	-1.654	2.752	0.02239	0.24610
RegenerationR3	0.588	2.752	0.44156	0.82774
RegenerationR4	-2.322	2.752	0.00403	0.08709
RegenerationR5	-1.048	2.752	0.11138	0.50366
RegenerationR6	0.594	2.752	0.38953	0.72962
RegenerationBL	-0.75	2.752	0.50742	0.87089
RegenerationTP	-0.701	2.752	0.49139	0.89638

Genes with expression patterns similar to MligTC455_40122

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40122	232	4.84	Mlig455_004376	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004376 {REF} {Length: 8635} {RNA1509_13095, RNA1509_14997} {RNA1310_3762, RNA1509_13095, RNA1509_14997} {RNA1509_13095, RNA1509_14997, RNA815_8206}
2.	MligTC455_19768	85	1.77	Mlig455_024294	Neo: - Age: Up-Down-Down		0.969	-	-	-	-	-	0.969	Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603}
3.	MligTC455_15446	84	1.76	Mlig455_049757	Neo: Irradiation Age: logFC(26M/2M)=0.275 Region-enriched R5: 3.436/0.00161	ESRRG	0.957	-	-	0.957	-	-	-	Mlig455_049757 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=80.9]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=85.1, Expect=4e-19]; ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [Score=83.2, Expect=2e-18]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=82.8, Expect=3e-18]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=82.8, Expect=2e-18]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=82.4, Expect=2e-18]; ENSG00000185551, NR2F2, nuclear receptor subfamily 2 group F member 2, [Score=82.0, Expect=4e-18]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=85.1, Expect=3e-19]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=83.2, Expect=1e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=82.4, Expect=2e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=82.0, Expect=4e-18]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=81.6, Expect=5e-18]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=81.6, Expect=6e-18]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=84.3, Expect=4e-19]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=77.4, Expect=1e-17]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=88.6, Expect=2e-21]} {RNA1509_22231, RNA1509_56454} {RNA1310_7459.2, RNA1509_56454} {RNA1509_56454, RNA815_5691.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40122

232

4.84

Mlig455_004376

Neo: -

Age: -

1.000

Mlig455_004376 {REF} {Length: 8635} {RNA1509_13095, RNA1509_14997} {RNA1310_3762, RNA1509_13095, RNA1509_14997} {RNA1509_13095, RNA1509_14997, RNA815_8206}

MligTC455_19768

1.77

Mlig455_024294

Neo: -

Age: Up-Down-Down

0.969

Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603}

MligTC455_15446

1.76

Mlig455_049757

Neo: Irradiation

Age: logFC(26M/2M)=0.275

Region-enriched R5: 3.436/0.00161

ESRRG

0.957

Mlig455_049757 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=80.9]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=85.1, Expect=4e-19]; ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [Score=83.2, Expect=2e-18]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=82.8, Expect=3e-18]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=82.8, Expect=2e-18]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=82.4, Expect=2e-18]; ENSG00000185551, NR2F2, nuclear receptor subfamily 2 group F member 2, [Score=82.0, Expect=4e-18]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=85.1, Expect=3e-19]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=83.2, Expect=1e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=82.4, Expect=2e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=82.0, Expect=4e-18]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=81.6, Expect=5e-18]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=81.6, Expect=6e-18]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=84.3, Expect=4e-19]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=77.4, Expect=1e-17]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=88.6, Expect=2e-21]} {RNA1509_22231, RNA1509_56454} {RNA1310_7459.2, RNA1509_56454} {RNA1509_56454, RNA815_5691.1}