Data search
Results for MligTC455_19768
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19768 | 85 | 1.77 | Mlig455_024294 | Neo: - Age: Up-Down-Down |
Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603} |
Cumulative graph for MligTC455_19768
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.497 | 1.747 | 0.99957 | 1.00000 | |
| RegionR2 | 3.343 | 1.747 | 0.00885 | 0.09359 | |
| RegionR3 | 1.567 | 1.747 | 0.17702 | 0.70575 | |
| RegionR4 | -1.043 | 1.747 | 0.93459 | 1.00000 | |
| RegionR5 | 0.685 | 1.747 | 0.50945 | 0.87233 | |
| RegionR6 | 2.13 | 1.747 | 0.05670 | 0.44656 | |
| RegionR7 | 2.444 | 1.747 | 0.07062 | 0.51095 | |
| RegionR8 | -3.63 | 1.747 | 0.99993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.429 | 1.747 | 0.99981 | 1.00000 | |
| RegenerationR2 | -1.057 | 1.747 | 0.23858 | 0.68653 | |
| RegenerationR3 | 0.897 | 1.747 | 0.33198 | 0.75762 | |
| RegenerationR4 | 2.263 | 1.747 | 0.01975 | 0.22097 | |
| RegenerationR5 | 1.136 | 1.747 | 0.16887 | 0.59607 | |
| RegenerationR6 | 1.676 | 1.747 | 0.04620 | 0.26815 | |
| RegenerationBL | 2.607 | 1.747 | 0.10030 | 0.37238 | |
| RegenerationTP | 3.38 | 1.747 | 0.08123 | 0.45283 |
Genes with expression patterns similar to MligTC455_19768
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19768 | 85 | 1.77 | Mlig455_024294 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603} | |
| 2. | MligTC455_14219 | 18 | 0.38 | Mlig455_011705 | Neo: - Age: - |
1.681 | - | - | 0.954 | - | 0.727 | - | Mlig455_011705 {REF} {Length: 389} {NoTransDecoderORF} {RNA1310_66272} {RNA815_52356} | |
| 3. | MligTC455_46744 | 268 | 5.58 | Mlig455_018072 | Neo: - |
1 | - | - | 1.000 | - | - | - | Mlig455_018072 {REF} {Length: 1515} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=19.2]} {RNA1509_52366} {RNA1310_36796} {RNA815_38428} | |
| 4. | MligTC455_16176 | 76 | 1.58 | Mlig455_048486 | Neo: Int S/G2/M Age: - |
GCM1 | 0.998 | - | - | 0.998 | - | - | - | Mlig455_048486 {REF} {Length: 2372} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=197, Expect=3e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=230, Expect=2e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872} |
| 5. | MligTC455_50509 | 38 | 0.79 | Mlig455_024809 | Neo: - Age: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_024809 {REF} {Length: 2779} {RNA1310_44589} {RNA815_56600} | |
| 6. | MligTC455_07174 | 94 | 1.96 | Mlig455_007312 | Neo: - Age: Up-Down-Down |
0.971 | - | - | 0.971 | - | - | - | Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807} | |
| 7. | MligTC455_19250 | 57 | 1.18 | Mlig455_050978 | Neo: - Age: - |
RAC1 | 0.97 | - | - | 0.970 | - | - | - | Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838} |
| 8. | MligTC455_40122 | 232 | 4.84 | Mlig455_004376 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_004376 {REF} {Length: 8635} {RNA1509_13095, RNA1509_14997} {RNA1310_3762, RNA1509_13095, RNA1509_14997} {RNA1509_13095, RNA1509_14997, RNA815_8206} | |
| 9. | MligTC455_25169 | 62 | 1.29 | Mlig455_017959 | Neo: Irradiation Age: - |
SPECC1L | 0.967 | - | - | 0.967 | - | - | - | Mlig455_017959 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=68.3]; CAMSAP CH domain [PF11971.10, score=22.3]} {Human: ENSG00000100014, SPECC1L, sperm antigen with calponin homology and coiled-coil domains 1 like, [RH, Score=264, Expect=5e-73]} {Mouse: ENSMUSG00000033444, Specc1l, sperm antigen with calponin homology and coiled-coil domains 1-like, [RH, Score=261, Expect=3e-72]} {Dmel: FBgn0025633, CG13366, [RH, Score=187, Expect=3e-48]} {Celegans: WBGene00020530, T15B12.1, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_7845_0_1, dd_Smed_v6_7845_0_1, [Score=159, Expect=7e-40]} {RNA1509_39130, RNA1509_7795} {RNA1310_10182.1, RNA1509_39130, RNA1509_7795} {RNA1509_39130, RNA1509_7795, RNA815_11375} |
| 10. | MligTC455_34460 | 1343 | 27.99 | Mlig455_008843, Mlig455_008945 | Neo: - Age: - Region-enriched R7: 4.606/0.00000 |
CELF3, CELF6 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_008843 {REF} {Length: 4989} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=180.7]; RNA recognition motif [PF16367.7, score=26.7]} {Human: ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=419, Expect=2e-142]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=433, Expect=5e-148]} {Dmel: FBgn0262475, bru2, bruno 2, [Score=350, Expect=2e-112]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=270, Expect=8e-85]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [Score=442, Expect=5e-151]} {RNA1509_31520, RNA1509_34271} {RNA1310_10251.1, RNA1509_31520, RNA1509_34271} {RNA1509_31520, RNA1509_34271, RNA815_6403.2} Mlig455_008945 {REF} {Length: 2838} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.6]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=311, Expect=5e-101]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=309, Expect=4e-100]; ENSG00000273025, AC009690.3, novel transcript, [Score=306, Expect=8e-99]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=306, Expect=8e-99]} {Mouse: ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=315, Expect=5e-102]; ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=310, Expect=1e-101]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=308, Expect=1e-99]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=305, Expect=1e-99]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=172, Expect=1e-48]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=358, Expect=6e-120]} {RNA1509_34271} {RNA1310_10251.1} {RNA815_6403.2} |
| 11. | MligTC455_38959 | 4417 | 92.01 | Mlig455_020233 | Neo: - Age: - Region-enriched R7: 2.256/0.00000 Regeneration-downregulated BL: -3.320 Regeneration-depleted BL: -3.320 |
C16orf89 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_020233 {REF} {Length: 1707} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=221.1]} {Human: ENSG00000153446, C16orf89, chromosome 16 open reading frame 89, [RH, Score=142, Expect=1e-38]} {Mouse: ENSMUSG00000051669, AU021092, expressed sequence AU021092, [RH, Score=134, Expect=8e-36]} {Dmel: FBgn0034069, CG8401, [RH, Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_21285_0_1, dd_Smed_v6_21285_0_1, [RH, Score=207, Expect=4e-64]} {RNA1509_6304, RNA1509_9939} {RNA1310_26434.1, RNA1509_6304, RNA1509_9939} {RNA1509_6304, RNA1509_9939, RNA815_24266} |
| 12. | MligTC455_36667 | 84 | 1.75 | Mlig455_016177 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.440 Region-enriched R2: 4.490/0.00556 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_016177 {REF} {Length: 3035} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=47.6]; Immunoglobulin domain [PF13927.8, score=47.0]; Immunoglobulin domain [PF00047.27, score=32.1]; Immunoglobulin domain [PF13895.8, score=27.4]; Natural killer cell receptor 2B4 [PF11465.10, score=26.4]; Immunoglobulin V-set domain [PF07686.19, score=23.5]} {Dmel: FBgn0259245, DIP-beta, Dpr-interacting protein beta, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00006985, zig-8, Zwei Ig domain protein zig-8, [RH, Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=72.0, Expect=6e-14]} {RNA1509_49618} {RNA1310_15195} {RNA815_58259} | |
| 13. | MligTC455_52522 | 60 | 1.24 | Mlig455_021733 | Neo: - Age: - |
RAC1 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_021733 {REF} {Length: 1405} {Pfam: Ras family [PF00071.24, score=161.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=73.7]; ADP-ribosylation factor family [PF00025.23, score=24.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=217, Expect=5e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=3e-70]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=208, Expect=2e-68]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=217, Expect=4e-72]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=2e-70]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=209, Expect=3e-69]} {Dmel: FBgn0010333, Rac1, [Score=212, Expect=2e-70]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=209, Expect=2e-69]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=207, Expect=7e-69]} {RNA1509_54289} {RNA1310_38039, RNA1509_54289} {RNA1509_54289, RNA815_55313} |
| 14. | MligTC455_40259 | 1948 | 40.59 | Mlig455_057998 | Neo: - Age: - Region-enriched R7: 4.948/0.00000 Regeneration-depleted R6: -7.572 |
AVP | 0.959 | - | - | 0.959 | - | - | - | Mlig455_057998 {REF} {Length: 1201} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=58.4]} {Human: ENSG00000101200, AVP, arginine vasopressin, [RH, Score=57.8, Expect=5e-10]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [RH, Score=62.8, Expect=5e-12]} {RNA1509_15970} {RNA1310_46866} {RNA815_23759} |
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