TomoSeq data search

Data search

Results for MligTC455_40176

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40176

48

1.01

Mlig455_062901

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.455/0.04678

DMRT2

Mlig455_062901 {REF} {Length: 1531} {Pfam: DM DNA binding domain [PF00751.20, score=75.0]} {Human: ENSG00000173253, DMRT2, doublesex and mab-3 related transcription factor 2, [RH, Score=122, Expect=4e-31]} {Mouse: ENSMUSG00000048138, Dmrt2, doublesex and mab-3 related transcription factor 2, [RH, Score=123, Expect=2e-31]} {Dmel: FBgn0030477, dmrt11E, doublesex-Mab related 11E, [RH, Score=120, Expect=1e-31]} {Celegans: WBGene00017326, dmd-5, DM (Doublesex/MAB-3) Domain family, [Score=100, Expect=7e-25]} {Smed: dd_Smed_v6_13283_0_1, dd_Smed_v6_13283_0_1, [RH, Score=115, Expect=1e-30]} {RNA1509_30715} {RNA1310_35922} {RNA815_9171.1}

Cumulative graph for MligTC455_40176

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.636	1.462	1.00000	1.00000
RegionR2	3.409	1.462	0.06650	0.31305
RegionR3	4.455	1.462	0.00186	0.04678
RegionR4	0.781	1.462	0.44167	0.77027
RegionR5	1.9	1.462	0.19638	0.48406
RegionR6	3.849	1.462	0.01136	0.18188
RegionR7	-2.149	1.462	1.00000	1.00000
RegionR8	-4.609	1.462	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.334	1.462	0.99994	1.00000
RegenerationR2	-0.483	1.462	0.60065	0.91575
RegenerationR3	-0.047	1.462	0.99836	1.00000
RegenerationR4	0.801	1.462	0.37345	0.79633
RegenerationR5	1.792	1.462	0.03716	0.31944
RegenerationR6	1.256	1.462	0.12027	0.42667
RegenerationBL	2.49	1.462	0.23742	0.59084
RegenerationTP	0.896	1.462	0.99992	1.00000

Genes with expression patterns similar to MligTC455_40176

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40176	48	1.01	Mlig455_062901	Neo: - Age: Down-Up-Down Region-enriched R3: 4.455/0.04678	DMRT2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062901 {REF} {Length: 1531} {Pfam: DM DNA binding domain [PF00751.20, score=75.0]} {Human: ENSG00000173253, DMRT2, doublesex and mab-3 related transcription factor 2, [RH, Score=122, Expect=4e-31]} {Mouse: ENSMUSG00000048138, Dmrt2, doublesex and mab-3 related transcription factor 2, [RH, Score=123, Expect=2e-31]} {Dmel: FBgn0030477, dmrt11E, doublesex-Mab related 11E, [RH, Score=120, Expect=1e-31]} {Celegans: WBGene00017326, dmd-5, DM (Doublesex/MAB-3) Domain family, [Score=100, Expect=7e-25]} {Smed: dd_Smed_v6_13283_0_1, dd_Smed_v6_13283_0_1, [RH, Score=115, Expect=1e-30]} {RNA1509_30715} {RNA1310_35922} {RNA815_9171.1}
2.	MligTC455_39842	82	1.71	Mlig455_061146	Neo: - Age: - Regeneration-enriched R6: 11.621 Regeneration-enriched R5: 10.486 Regeneration-enriched BL: 9.926 Regeneration-enriched R4: 9.263 Regeneration-enriched R3: 8.435	WNT2B	0.965	-	-	-	-	-	0.965	Mlig455_061146 {REF} {Length: 1636} {Pfam: wnt family [PF00110.21, score=133.7]} {Human: ENSG00000134245, WNT2B, Wnt family member 2B, [Score=81.6, Expect=3e-16]; ENSG00000188064, WNT7B, Wnt family member 7B, [Score=80.1, Expect=6e-16]; ENSG00000002745, WNT16, Wnt family member 16, [Score=80.1, Expect=7e-16]; ENSG00000276799, WNT9B, Wnt family member 9B, [Score=79.0, Expect=2e-15]; ENSG00000158955, WNT9B, Wnt family member 9B, [Score=79.0, Expect=2e-15]; ENSG00000162552, WNT4, Wnt family member 4, [Score=77.8, Expect=4e-15]} {Mouse: ENSMUSG00000027840, Wnt2b, wingless-type MMTV integration site family, member 2B, [Score=80.1, Expect=6e-16]; ENSMUSG00000022382, Wnt7b, wingless-type MMTV integration site family, member 7B, [Score=78.6, Expect=1e-15]; ENSMUSG00000021994, Wnt5a, wingless-type MMTV integration site family, member 5A, [Score=77.8, Expect=3e-15]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=77.4, Expect=4e-15]; ENSMUSG00000030093, Wnt7a, wingless-type MMTV integration site family, member 7A, [Score=76.6, Expect=6e-15]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=82.0, Expect=2e-16]} {Celegans: WBGene00000857, cwn-1, [Score=72.8, Expect=8e-14]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [Score=117, Expect=6e-29]}
3.	MligTC455_19557	692	14.42	Mlig455_021724	Neo: - Age: -	MYLK	0.961	-	-	-	-	0.961	-	Mlig455_021724 {REF} {Length: 3239} {Pfam: Protein kinase domain [PF00069.27, score=236.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.5]} {Human: ENSG00000065534, MYLK, myosin light chain kinase, [Score=355, Expect=1e-107]} {Mouse: ENSMUSG00000022836, Mylk, myosin, light polypeptide kinase, [Score=354, Expect=3e-107]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [RH, Score=330, Expect=6e-99]} {Celegans: WBGene00013869, mlck-1, Myosin Light Chain Kinase related, [RH, Score=289, Expect=6e-86]} {Smed: dd_Smed_v6_7046_0_1, dd_Smed_v6_7046_0_1, [RH, Score=414, Expect=2e-142]} {RNA1509_7333} {RNA1310_4794, RNA1509_7333} {RNA1509_7333, RNA815_7188}
4.	MligTC455_29544	1846	38.47	Mlig455_025882	Neo: - Age: logFC(26M/2M)=0.204 Region-enriched R4: 1.015/0.00393	TM9SF3	0.959	-	-	-	-	0.959	-	Mlig455_025882 {REF} {Length: 4860} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=508.0]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [RH, Score=827, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [RH, Score=826, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [RH, Score=793, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [RH, Score=785, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1310_11216, RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1509_15942, RNA1509_31690, RNA1509_3514, RNA815_1966}
5.	MligTC455_45423	318	6.62	Mlig455_027542	Neo: - Age: -	EMC1	0.955	-	-	-	-	0.955	-	Mlig455_027542 {REF} {Length: 5749} {Pfam: ER membrane protein complex subunit 1, C-terminal [PF07774.15, score=223.6]; PQQ-like domain [PF13360.8, score=52.2]; PQQ enzyme repeat [PF01011.23, score=22.3]} {Human: ENSG00000127463, EMC1, ER membrane protein complex subunit 1, [RH, Score=417, Expect=2e-129]} {Mouse: ENSMUSG00000078517, Emc1, ER membrane protein complex subunit 1, [RH, Score=409, Expect=9e-127]} {Dmel: FBgn0037530, EMC1, ER Membrane protein Complex 1, [RH, Score=368, Expect=3e-112]} {Celegans: WBGene00019209, emc-1, EMC Endoplasmic Membrane protein Complex (Yeast EMC) homolog, [RH, Score=340, Expect=1e-101]} {Smed: dd_Smed_v6_6541_0_2, dd_Smed_v6_6541_0_2, [RH, Score=479, Expect=1e-152]} {RNA1509_40971, RNA1509_8164} {RNA1310_2556.1, RNA1509_40971} {RNA1509_40971, RNA815_1064.1}
6.	MligTC455_09184	172	3.59	Mlig455_049490	Neo: - Age: Up-Down-Up Region-enriched R6: 2.250/0.01050 Region-enriched R5: 2.216/0.00016	FZD10	0.95	-	-	-	-	-	0.950	Mlig455_049490 {REF} {Length: 3141} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=284.4]; Fz domain [PF01392.24, score=71.1]} {Human: ENSG00000111432, FZD10, frizzled class receptor 10, [Score=304, Expect=2e-94]; ENSG00000163251, FZD5, frizzled class receptor 5, [Score=294, Expect=1e-90]; ENSG00000188763, FZD9, frizzled class receptor 9, [Score=290, Expect=3e-89]} {Mouse: ENSMUSG00000049551, Fzd9, frizzled class receptor 9, [Score=308, Expect=3e-96]; ENSMUSG00000081683, Fzd10, frizzled class receptor 10, [Score=301, Expect=2e-93]; ENSMUSG00000045005, Fzd5, frizzled class receptor 5, [Score=295, Expect=3e-91]} {Dmel: FBgn0001085, fz, frizzled, [Score=231, Expect=1e-67]} {Celegans: WBGene00000478, cfz-2, Frizzled-2, [Score=238, Expect=5e-70]} {Smed: dd_Smed_v6_11650_0_1, dd_Smed_v6_11650_0_1, [Score=294, Expect=2e-90]} {RNA1509_26552} {RNA1310_10390, RNA1509_26552} {RNA1509_26552, RNA815_21631}

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