Data search
Results for MligTC455_40192
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40192 | 680 | 14.17 | Mlig455_070340 | Neo: - Age: - Region-enriched R2: 1.382/0.03531 |
CPSF4L | Mlig455_070340 {REF} {Length: 5319} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=29.9]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.1, Expect=3e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_28003} {RNA1310_12659.1} {RNA815_306} |
Cumulative graph for MligTC455_40192
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.394 | 4.233 | 0.02233 | 0.40623 | |
| RegionR2 | 1.382 | 4.233 | 0.00203 | 0.03531 | |
| RegionR3 | 0.755 | 4.233 | 0.02416 | 0.26520 | |
| RegionR4 | -0.197 | 4.233 | 0.63931 | 0.94525 | |
| RegionR5 | -0.579 | 4.233 | 0.08596 | 0.27509 | |
| RegionR6 | 0.471 | 4.233 | 0.18376 | 0.74835 | |
| RegionR7 | -0.007 | 4.233 | 0.98810 | 1.00000 | |
| RegionR8 | 0.569 | 4.233 | 0.26601 | 0.88978 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.106 | 4.233 | 0.47876 | 1.00000 | |
| RegenerationR2 | -0.614 | 4.233 | 0.11352 | 0.52534 | |
| RegenerationR3 | -0.191 | 4.233 | 0.65352 | 0.93044 | |
| RegenerationR4 | -0.536 | 4.233 | 0.22262 | 0.67097 | |
| RegenerationR5 | 0.196 | 4.233 | 0.61552 | 0.91670 | |
| RegenerationR6 | -0.382 | 4.233 | 0.39948 | 0.73683 | |
| RegenerationBL | -0.656 | 4.233 | 0.30925 | 0.67463 | |
| RegenerationTP | -0.478 | 4.233 | 0.42748 | 0.85065 |
Genes with expression patterns similar to MligTC455_40192
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40192 | 680 | 14.17 | Mlig455_070340 | Neo: - Age: - Region-enriched R2: 1.382/0.03531 |
CPSF4L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070340 {REF} {Length: 5319} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=29.9]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.1, Expect=3e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_28003} {RNA1310_12659.1} {RNA815_306} |
| 2. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 4.783 | 0.905 | 0.974 | 0.959 | 0.986 | 0.959 | - | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 3. | MligTC455_39075 | 1642 | 34.2 | Mlig455_042619, Mlig455_042654 | Neo: - Age: Up-Down-Down Region-enriched R4: 2.221/0.00002 |
KIF2A | 2.489 | - | - | - | 0.705 | 0.821 | 0.963 | Mlig455_042619 {REF} {Length: 5005} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=306.0]; Microtubule binding [PF16796.7, score=49.7]} {Human: ENSG00000068796, KIF2A, kinesin family member 2A, [RH, Score=712, Expect=0.0]} {Mouse: ENSMUSG00000021693, Kif2a, kinesin family member 2A, [RH, Score=657, Expect=0.0]} {Dmel: FBgn0030268, Klp10A, Kinesin-like protein at 10A, [RH, Score=581, Expect=0.0]} {Celegans: WBGene00002219, klp-7, Kinesin-like protein, [RH, Score=488, Expect=5e-162]} {Smed: dd_Smed_v6_3087_0_1, dd_Smed_v6_3087_0_1, [RH, Score=806, Expect=0.0]} {RNA1509_20918} {RNA1310_7277} {RNA815_5104} Mlig455_042654 {REF} {Length: 5415} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=305.2]; Microtubule binding [PF16796.7, score=49.8]} {Human: ENSG00000068796, KIF2A, kinesin family member 2A, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000021693, Kif2a, kinesin family member 2A, [RH, Score=689, Expect=0.0]} {Dmel: FBgn0030268, Klp10A, Kinesin-like protein at 10A, [RH, Score=580, Expect=0.0]} {Celegans: WBGene00002219, klp-7, Kinesin-like protein, [RH, Score=527, Expect=4e-178]} {Smed: dd_Smed_v6_3087_0_1, dd_Smed_v6_3087_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_14705, RNA1509_20918, RNA1509_24352, RNA1509_26579, RNA1509_52010} {RNA1310_7277, RNA1509_14705, RNA1509_20918, RNA1509_24352, RNA1509_26579, RNA1509_52010} {RNA1509_14705, RNA1509_20918, RNA1509_24352, RNA1509_26579, RNA1509_52010, RNA815_5104} |
| 4. | MligTC455_32872 | 223 | 4.64 | Mlig455_028341 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_028341 {REF} {Length: 2114} {Pfam: Carboxysome shell peptide mid-region [PF12288.10, score=20.7]} {RNA1509_29488} {RNA1310_45860.1} {RNA815_25627} | |
| 5. | MligTC455_46678 | 1233 | 25.69 | Mlig455_001207 | Neo: - Age: - Region-enriched R5: 1.213/0.00052 |
C3orf58 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_001207 {REF} {Length: 1738} {TRANSSPLICED} {Pfam: Protein-kinase domain of FAM69 [PF12260.10, score=100.0]} {Human: ENSG00000181744, C3orf58, chromosome 3 open reading frame 58, [RH, Score=165, Expect=6e-46]} {Mouse: ENSMUSG00000045414, 1190002N15Rik, RIKEN cDNA 1190002N15 gene, [RH, Score=162, Expect=6e-45]} {Smed: dd_Smed_v6_8114_0_1, dd_Smed_v6_8114_0_1, [RH, Score=163, Expect=2e-45]} {RNA1509_12580} {RNA1310_17698.1, RNA1509_12580} {RNA1509_12580, RNA815_6835.1} |
| 6. | MligTC455_03414 | 118 | 2.45 | Mlig455_034504 | Neo: - Age: Up-Down-Up Region-enriched R4: 3.045/0.01847 |
SLC23A1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_034504 {REF} {Length: 4795} {Pfam: Permease family [PF00860.22, score=246.7]} {Human: ENSG00000170482, SLC23A1, solute carrier family 23 member 1, [Score=322, Expect=6e-102]; ENSG00000089057, SLC23A2, solute carrier family 23 member 2, [Score=316, Expect=8e-99]} {Mouse: ENSMUSG00000029847, Slc23a4, solute carrier family 23 member 4, [Score=359, Expect=7e-116]} {Dmel: FBgn0037807, CG6293, [Score=296, Expect=2e-92]} {Celegans: WBGene00011595, T07G12.4, [RH, Score=250, Expect=2e-75]} {Smed: dd_Smed_v6_9401_0_1, dd_Smed_v6_9401_0_1, [Score=291, Expect=1e-90]} {RNA1509_26803} {RNA1310_9945.1} {RNA815_13096} |
| 7. | MligTC455_20844 | 1141 | 23.76 | Mlig455_005025 | Neo: - Age: Down-Up-Down |
TRABD | 0.95 | - | - | - | - | - | 0.950 | Mlig455_005025 {REF} {Length: 2840} {TRANSSPLICED} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=80.1]} {Human: ENSG00000170638, TRABD, TraB domain containing, [RH, Score=191, Expect=4e-57]} {Mouse: ENSMUSG00000015363, Trabd, TraB domain containing, [RH, Score=189, Expect=2e-56]} {Dmel: FBgn0283438, CG46280, [RH, Score=186, Expect=5e-54]} {Celegans: WBGene00018161, F38A5.2, [RH, Score=189, Expect=6e-56]} {Smed: dd_Smed_v6_6212_0_1, dd_Smed_v6_6212_0_1, [RH, Score=228, Expect=2e-72]} {RNA1509_9476} {RNA1310_12154} {RNA815_11173} |
| 8. | MligTC455_50241 | 681 | 14.2 | Mlig455_026783, Mlig455_051797 | Neo: - Age: - |
DCTN1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_026783 {REF} {Length: 5230} {TRANSSPLICED} {Pfam: Dynein associated protein [PF12455.10, score=170.4]; CAP-Gly domain [PF01302.27, score=89.6]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [RH, Score=644, Expect=0.0]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001108, DCTN1-p150, Dynactin 1, p150 subunit, [RH, Score=502, Expect=2e-155]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [RH, Score=288, Expect=1e-79]} {Smed: dd_Smed_v6_4065_0_1, dd_Smed_v6_4065_0_1, [RH, Score=487, Expect=5e-151]} {RNA1509_3552} {RNA1310_1904, RNA1509_3552} {RNA1509_3552, RNA815_2756} Mlig455_051797 {REF} {Length: 5181} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=24.3} {Pfam: Dynein associated protein [PF12455.10, score=170.7]; CAP-Gly domain [PF01302.27, score=89.6]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0001108, DCTN1-p150, Dynactin 1, p150 subunit, [RH, Score=503, Expect=1e-155]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [RH, Score=285, Expect=2e-78]} {Smed: dd_Smed_v6_4065_0_1, dd_Smed_v6_4065_0_1, [RH, Score=484, Expect=8e-150]} {RNA1509_3552} {RNA1310_1904} {RNA815_2756} |
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