Data search
Results for MligTC455_40191
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
Cumulative graph for MligTC455_40191
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.949 | 4.313 | 0.26252 | 0.91188 | |
| RegionR2 | 1.038 | 4.313 | 0.01479 | 0.12827 | |
| RegionR3 | 0.473 | 4.313 | 0.12956 | 0.61861 | |
| RegionR4 | -0.255 | 4.313 | 0.52021 | 0.84517 | |
| RegionR5 | -0.892 | 4.313 | 0.00366 | 0.02746 | |
| RegionR6 | 0.17 | 4.313 | 0.60733 | 1.00000 | |
| RegionR7 | 0.046 | 4.313 | 0.91078 | 1.00000 | |
| RegionR8 | 0.37 | 4.313 | 0.44721 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.531 | 4.313 | 0.25153 | 0.96682 | |
| RegenerationR2 | -0.757 | 4.313 | 0.05032 | 0.37041 | |
| RegenerationR3 | -0.327 | 4.313 | 0.43268 | 0.82267 | |
| RegenerationR4 | -0.683 | 4.313 | 0.11111 | 0.51143 | |
| RegenerationR5 | 0.201 | 4.313 | 0.60478 | 0.91199 | |
| RegenerationR6 | -0.262 | 4.313 | 0.55415 | 0.84170 | |
| RegenerationBL | -0.8 | 4.313 | 0.20846 | 0.55091 | |
| RegenerationTP | -0.756 | 4.313 | 0.20019 | 0.64080 |
Genes with expression patterns similar to MligTC455_40191
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 2. | MligTC455_40192 | 680 | 14.17 | Mlig455_070340 | Neo: - Age: - Region-enriched R2: 1.382/0.03531 |
CPSF4L | 4.783 | 0.905 | 0.974 | 0.959 | 0.986 | 0.959 | - | Mlig455_070340 {REF} {Length: 5319} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=29.9]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.1, Expect=3e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_28003} {RNA1310_12659.1} {RNA815_306} |
| 3. | MligTC455_25875 | 371 | 7.72 | Mlig455_002814 | Neo: - Age: - |
PPP6R3 | 1.836 | - | - | - | - | 0.879 | 0.957 | Mlig455_002814 {REF} {Length: 4821} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=150.3]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [RH, Score=328, Expect=7e-98]} {Mouse: ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [RH, Score=327, Expect=1e-97]} {Dmel: FBgn0035688, CG10289, [RH, Score=206, Expect=1e-54]} {Celegans: WBGene00008166, saps-1, SAPS (Phosphatase associated) domain protein, [RH, Score=74.7, Expect=2e-13]} {Smed: dd_Smed_v6_2215_0_1, dd_Smed_v6_2215_0_1, [RH, Score=123, Expect=2e-28]} {RNA1509_42579, RNA1509_6659} {RNA1310_4346.1, RNA1509_42579, RNA1509_6659} {RNA1509_42579, RNA1509_6659, RNA815_12593} |
| 4. | MligTC455_44233 | 289 | 6.02 | Mlig455_051463 | Neo: - Age: - |
ENDOU | 1.769 | - | - | - | - | 0.805 | 0.964 | Mlig455_051463 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Endoribonuclease XendoU [PF09412.12, score=257.0]} {Human: ENSG00000111405, ENDOU, endonuclease, poly(U) specific, [RH, Score=145, Expect=1e-40]} {Mouse: ENSMUSG00000022468, Endou, endonuclease, polyU-specific, [RH, Score=148, Expect=3e-41]} {Dmel: FBgn0038381, EndoU, Endoribonuclease U-specific, [RH, Score=112, Expect=1e-28]} {Celegans: WBGene00010488, endu-1, Poly(U)-specific endoribonuclease homolog, [RH, Score=120, Expect=4e-32]} {Smed: dd_Smed_v6_9580_0_1, dd_Smed_v6_9580_0_1, [RH, Score=219, Expect=4e-70]} {RNA1509_46201, RNA1509_51120} {RNA1310_16027, RNA1509_46201, RNA1509_51120} {RNA1509_46201, RNA1509_51120, RNA815_6308.1} |
| 5. | MligTC455_19137 | 807 | 16.82 | Mlig455_067132 | Neo: Irradiation Age: - |
KDM4C | 0.974 | - | - | - | - | - | 0.974 | Mlig455_067132 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=145.4]; PHD-zinc-finger like domain [PF13832.8, score=57.1]; jmjN domain [PF02375.19, score=52.4]; PHD-finger [PF13831.8, score=36.5]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=34.5]; PHD-finger [PF00628.31, score=29.8]; PHD-like zinc-binding domain [PF13771.8, score=26.1]; Domain of unknown function (DUF4537) [PF15057.8, score=22.1]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=18.9]} {Human: ENSG00000107077, KDM4C, lysine demethylase 4C, [RH, Score=479, Expect=5e-151]; ENSG00000066135, KDM4A, lysine demethylase 4A, [RH, Score=475, Expect=7e-147]; ENSG00000127663, KDM4B, lysine demethylase 4B, [RH, Score=462, Expect=4e-141]} {Mouse: ENSMUSG00000033326, Kdm4a, lysine (K)-specific demethylase 4A, [RH, Score=476, Expect=4e-147]; ENSMUSG00000028397, Kdm4c, lysine (K)-specific demethylase 4C, [RH, Score=473, Expect=4e-146]; ENSMUSG00000024201, Kdm4b, lysine (K)-specific demethylase 4B, [RH, Score=467, Expect=3e-144]} {Dmel: FBgn0053182, Kdm4B, Lysine (K)-specific demethylase 4B, [RH, Score=474, Expect=6e-151]} {Celegans: WBGene00012982, jmjd-2, Lysine-specific demethylase 4, [RH, Score=328, Expect=3e-95]} {Smed: dd_Smed_v6_10398_0_1, dd_Smed_v6_10398_0_1, [RH, Score=523, Expect=5e-167]} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1310_1204, RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721, RNA815_6410} |
| 6. | MligTC455_34167 | 599 | 12.49 | Mlig455_056273 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.787/0.00113 |
VAV2 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_056273 {REF} {Length: 4422} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=115.8]; SH2 domain [PF00017.26, score=61.7]; Calponin homology (CH) domain [PF00307.33, score=39.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.2]; Variant SH3 domain [PF07653.19, score=28.8]; CAMSAP CH domain [PF11971.10, score=24.8]; Variant SH3 domain [PF14604.8, score=21.9]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [RH, Score=332, Expect=2e-99]; ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [RH, Score=321, Expect=2e-95]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [RH, Score=325, Expect=4e-97]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [RH, Score=314, Expect=6e-93]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [RH, Score=214, Expect=6e-58]} {Celegans: WBGene00006887, vav-1, [Score=206, Expect=1e-54]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [RH, Score=297, Expect=7e-88]} {RNA1509_6656} {RNA1310_4823.2, RNA1509_6656} {RNA1509_6656, RNA815_4374} |
| 7. | MligTC455_47617 | 520 | 10.84 | Mlig455_027290 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_027290 {REF} {Length: 468} {NoTransDecoderORF} {RNA1509_26835} {RNA1310_8654.1, RNA1509_26835} {RNA1509_26835, RNA815_52274} | |
| 8. | MligTC455_26928 | 570 | 11.87 | Mlig455_032950 | Neo: - Age: logFC(26M/2M)=-0.353 |
DNAAF2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1} |
| 9. | MligTC455_25594 | 546 | 11.38 | Mlig455_010729 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_010729 {REF} {Length: 6514} {TRANSSPLICED} {RNA1509_4078} {RNA1310_3072, RNA1509_4078} {RNA1509_4078, RNA815_5186} | |
| 10. | MligTC455_38275 | 825 | 17.19 | Mlig455_047221 | Neo: - Age: - Region-enriched R5: 1.041/0.00680 |
USP32 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_047221 {REF} {Length: 6367} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=289.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=59.5]; DUSP domain [PF06337.14, score=57.9]; EF-hand domain pair [PF13499.8, score=32.2]; EF hand [PF00036.34, score=29.8]; EF-hand domain [PF13405.8, score=27.3]} {Human: ENSG00000170832, USP32, ubiquitin specific peptidase 32, [RH, Score=645, Expect=0.0]} {Mouse: ENSMUSG00000000804, Usp32, ubiquitin specific peptidase 32, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [RH, Score=664, Expect=0.0]} {Celegans: WBGene00000874, cyk-3, CYtoKinesis defect; Ubiquitin c-terminal hydrolase, [RH, Score=268, Expect=2e-73]} {Smed: dd_Smed_v6_6841_0_2, dd_Smed_v6_6841_0_2, [RH, Score=564, Expect=1e-175]} {RNA1509_20216, RNA1509_2380, RNA1509_45065, RNA1509_51584} {RNA1310_1614, RNA1509_20216, RNA1509_45065, RNA1509_51584} {RNA1509_20216, RNA1509_45065, RNA1509_51584, RNA815_143.1} |
| 11. | MligTC455_45268 | 1496 | 31.16 | Mlig455_016251 | Neo: - Age: - |
PDK3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_016251 {REF} {Length: 3291} {TRANSSPLICED} {Pfam: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase [PF10436.11, score=159.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=18.6]} {Human: ENSG00000067992, PDK3, pyruvate dehydrogenase kinase 3, [RH, Score=363, Expect=3e-123]; ENSG00000005882, PDK2, pyruvate dehydrogenase kinase 2, [RH, Score=358, Expect=5e-121]; ENSG00000004799, PDK4, pyruvate dehydrogenase kinase 4, [RH, Score=356, Expect=5e-120]; ENSG00000152256, PDK1, pyruvate dehydrogenase kinase 1, [RH, Score=345, Expect=1e-115]} {Mouse: ENSMUSG00000035232, Pdk3, pyruvate dehydrogenase kinase, isoenzyme 3, [RH, Score=364, Expect=2e-123]; ENSMUSG00000038967, Pdk2, pyruvate dehydrogenase kinase, isoenzyme 2, [RH, Score=355, Expect=8e-120]; ENSMUSG00000019577, Pdk4, pyruvate dehydrogenase kinase, isoenzyme 4, [RH, Score=352, Expect=1e-118]; ENSMUSG00000006494, Pdk1, pyruvate dehydrogenase kinase, isoenzyme 1, [RH, Score=350, Expect=9e-118]} {Dmel: FBgn0017558, Pdk, Pyruvate dehydrogenase kinase, [RH, Score=403, Expect=9e-139]} {Celegans: WBGene00022719, pdhk-2, Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, [RH, Score=357, Expect=4e-121]} {Smed: dd_Smed_v6_8596_0_1, dd_Smed_v6_8596_0_1, [RH, Score=387, Expect=3e-133]} {RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1310_20044, RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1509_11479, RNA1509_44060, RNA1509_51757, RNA815_9273} |
| 12. | MligTC455_36854 | 480 | 10.01 | Mlig455_043380, Mlig455_066320 | Neo: - Age: - |
CCDC191 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_043380 {REF} {Length: 4131} {TRANSSPLICED} {Human: ENSG00000163617, CCDC191, coiled-coil domain containing 191, [Score=115, Expect=2e-25]} {Mouse: ENSMUSG00000022701, Ccdc191, coiled-coil domain containing 191, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0031496, CG17258, [RH, Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_8967_0_2, dd_Smed_v6_8967_0_2, [Score=132, Expect=2e-31]} {RNA1509_39248} {RNA1310_1501.1} {RNA815_1513} Mlig455_066320 {REF} {Length: 4152} {TRANSSPLICED} {Human: ENSG00000163617, CCDC191, coiled-coil domain containing 191, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000022701, Ccdc191, coiled-coil domain containing 191, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0031496, CG17258, [RH, Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_8967_0_2, dd_Smed_v6_8967_0_2, [Score=138, Expect=3e-33]} {RNA1509_39248} {RNA1310_1501.1, RNA1509_39248} {RNA1509_39248, RNA815_1513} |
| 13. | MligTC455_43024 | 907 | 18.9 | Mlig455_043735, Mlig455_043739, Mlig455_043829, Mlig455_047419 | Neo: - Age: logFC(26M/2M)=0.232 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_043735 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043739 {REF} {Length: 2554} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043829 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} Mlig455_047419 {REF} {Length: 2292} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} |
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