TomoSeq data search

Data search

Results for MligTC455_40193

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40193	147	3.06	Mlig455_004531	Neo: Int S/G2/M Age: -		Mlig455_004531 {REF} {Length: 1735} {TRANSSPLICED} {Pfam: Apc13p protein [PF05839.13, score=20.4]} {RNA1509_15961} {RNA1310_42883} {RNA815_15235}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40193

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.634	2.42	0.08303	0.62846
RegionR2	2.648	2.42	0.08531	0.35889
RegionR3	0.489	2.42	0.67912	1.00000
RegionR4	-0.342	2.42	0.94164	1.00000
RegionR5	1.524	2.42	0.17426	0.44620
RegionR6	1.12	2.42	0.38575	0.96288
RegionR7	0.958	2.42	0.49534	1.00000
RegionR8	1.238	2.42	0.43923	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.518	2.42	1.00000	1.00000
RegenerationR2	0.804	2.42	0.46396	0.85481
RegenerationR3	1.845	2.42	0.14888	0.57773
RegenerationR4	0.934	2.42	0.43280	0.83218
RegenerationR5	0.232	2.42	0.81406	0.99273
RegenerationR6	1.599	2.42	0.17972	0.51437
RegenerationBL	1.868	2.42	0.16186	0.48245
RegenerationTP	0.3	2.42	0.86349	1.00000

Genes with expression patterns similar to MligTC455_40193

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40193	147	3.06	Mlig455_004531	Neo: Int S/G2/M Age: -		5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_004531 {REF} {Length: 1735} {TRANSSPLICED} {Pfam: Apc13p protein [PF05839.13, score=20.4]} {RNA1509_15961} {RNA1310_42883} {RNA815_15235}
2.	MligTC455_26755	93	1.93	Mlig455_022157	Neo: - Age: Down-Down-Up	NELFB	0.981	-	-	-	-	-	0.981	Mlig455_022157 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Cofactor of BRCA1 (COBRA1) [PF06209.15, score=174.9]} {Human: ENSG00000188986, NELFB, negative elongation factor complex member B, [RH, Score=204, Expect=1e-56]} {Mouse: ENSMUSG00000013465, Nelfb, negative elongation factor complex member B, [RH, Score=209, Expect=4e-58]} {Dmel: FBgn0027553, NELF-B, [RH, Score=199, Expect=4e-55]} {Smed: dd_Smed_v6_9755_0_1, dd_Smed_v6_9755_0_1, [RH, Score=87.0, Expect=1e-17]} {RNA1509_30045} {RNA1310_13572, RNA1509_30045} {RNA1509_30045, RNA815_13418}
3.	MligTC455_51263	260	5.42	Mlig455_054142	Neo: - Age: Down-Up-Down	STRAP	0.967	-	-	-	-	-	0.967	Mlig455_054142 {REF} {Length: 1865} {Pfam: WD domain, G-beta repeat [PF00400.34, score=75.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.5]} {Human: ENSG00000023734, STRAP, serine/threonine kinase receptor associated protein, [Score=253, Expect=7e-82]} {Mouse: ENSMUSG00000030224, Strap, serine/threonine kinase receptor associated protein, [Score=253, Expect=4e-82]} {Dmel: FBgn0034876, wmd, wing morphogenesis defect, [Score=292, Expect=4e-98]} {Celegans: WBGene00001232, eif-3.I, Eukaryotic translation initiation factor 3 subunit I, [Score=74.3, Expect=7e-15]} {Smed: dd_Smed_v6_4502_0_1, dd_Smed_v6_4502_0_1, [Score=249, Expect=3e-81]} {RNA1509_35607} {RNA1310_16941.1} {RNA815_9660.1}
4.	MligTC455_53185	11	0.22	Mlig455_034069	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_034069 {REF} {Length: 1725} {RNA1310_48228} {RNA815_37322}
5.	MligTC455_31653	50	1.05	Mlig455_052346, Mlig455_061669, Mlig455_061670	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.143 Region-enriched R5: 3.058/0.00662		0.962	-	-	0.962	-	-	-	Mlig455_052346 {REF} {Length: 351} {NoTransDecoderORF} {RNA1509_55441} {RNA1310_61184} {RNA815_34518} Mlig455_061669 {REF} {Length: 4454} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=57.3]} {RNA1509_55441} {RNA1310_41707} {RNA815_34518} Mlig455_061670 {REF} {Length: 1800} {Pfam: SAP domain [PF02037.29, score=41.8]; SAP domain-containing new25 [PF18953.2, score=18.4]} {RNA1509_11319} {RNA1310_7370.1} {RNA815_6444}
6.	MligTC455_25629	246	5.13	Mlig455_038787, Mlig455_038796	Neo: - Age: -	MTOR	0.96	-	-	-	-	-	0.960	Mlig455_038787 {REF} {Length: 9062} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.1]; Domain of unknown function (DUF3385) [PF11865.10, score=133.7]; FKBP12-rapamycin binding domain [PF08771.13, score=116.2]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=38.0]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=26.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1802, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1804, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1622, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=831, Expect=0.0]} {RNA1509_2274, RNA1509_44760} {RNA1310_158.1, RNA1509_2274, RNA1509_44760} {RNA1509_2274, RNA1509_44760, RNA815_132} Mlig455_038796 {REF} {Length: 8981} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.0]; Domain of unknown function (DUF3385) [PF11865.10, score=133.0]; FKBP12-rapamycin binding domain [PF08771.13, score=116.4]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=37.6]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=25.5]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1805, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1806, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1619, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_2274, RNA1509_38439} {RNA1310_158.1, RNA1509_38439} {RNA1509_38439, RNA815_132}
7.	MligTC455_46466	37	0.76	Mlig455_009031	Neo: - Age: -	SLCO1A2	0.957	-	-	-	-	0.957	-	Mlig455_009031 {REF} {Length: 3247} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=343.2]; Major Facilitator Superfamily [PF07690.18, score=56.5]; Kazal-type serine protease inhibitor domain [PF07648.17, score=22.9]} {Human: ENSG00000084453, SLCO1A2, solute carrier organic anion transporter family member 1A2, [Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000079262, Slco1a6, solute carrier organic anion transporter family, member 1a6, [Score=195, Expect=1e-52]; ENSMUSG00000041698, Slco1a1, solute carrier organic anion transporter family, member 1a1, [Score=192, Expect=1e-51]; ENSMUSG00000038963, Slco4a1, solute carrier organic anion transporter family, member 4a1, [Score=187, Expect=7e-50]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=197, Expect=5e-53]} {Celegans: WBGene00013499, Y70G10A.3, Solute carrier organic anion transporter family member, [Score=153, Expect=1e-38]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [Score=217, Expect=4e-61]} {RNA1310_19417.2} {RNA815_13034.1}
8.	MligTC455_52792	229	4.77	Mlig455_038012	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_038012 {REF} {Length: 3785} {TRANSSPLICED} {Pfam: Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=24.9]} {RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1310_23418.2, RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1509_42202, RNA1509_55892, RNA1509_59923, RNA815_10560}
9.	MligTC455_09870	8	0.17	Mlig455_053392	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_053392 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_87210}
10.	MligTC455_15895	226	4.71	Mlig455_064442	Neo: - Age: Down-Up-Up	RABGGTB	0.954	-	-	-	-	-	0.954	Mlig455_064442 {REF} {Length: 1470} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=184.4]; Squalene-hopene cyclase N-terminal domain [PF13249.8, score=19.3]} {Human: ENSG00000137955, RABGGTB, Rab geranylgeranyltransferase subunit beta, [RH, Score=384, Expect=2e-133]} {Mouse: ENSMUSG00000038975, Rabggtb, Rab geranylgeranyl transferase, b subunit, [RH, Score=374, Expect=9e-130]} {Dmel: FBgn0028970, betaggt-II, beta subunit of type II geranylgeranyl transferase, [RH, Score=362, Expect=5e-125]} {Celegans: WBGene00015099, ggtb-1, Probable geranylgeranyl transferase type-2 subunit beta, [RH, Score=364, Expect=7e-126]} {Smed: dd_Smed_v6_3769_0_1, dd_Smed_v6_3769_0_1, [RH, Score=343, Expect=1e-117]} {RNA1509_27970} {RNA1310_22063, RNA1509_27970} {RNA1509_27970, RNA815_29569}
11.	MligTC455_11899	25	0.52	Mlig455_049912	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_049912 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1509_59327} {RNA1310_138888} {RNA815_6259}
12.	MligTC455_15502	256	5.33	Mlig455_070463	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_070463 {REF} {Length: 3819} {TRANSSPLICED} {RNA1509_37982, RNA1509_41271} {RNA1310_6219, RNA1509_41271} {RNA1509_41271, RNA815_21865}
13.	MligTC455_18834	33	0.68	Mlig455_000603	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_000603 {REF} {Length: 1888} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.2]} {RNA1310_27913} {RNA815_25050}
14.	MligTC455_22054	7	0.14	Mlig455_019642	Neo: - Age: -	IGFN1	0.952	-	-	-	-	0.952	-	Mlig455_019642 {REF} {Length: 1018} {Human: ENSG00000163395, IGFN1, immunoglobulin-like and fibronectin type III domain containing 1, [Score=50.1, Expect=1e-07]} {RNA1509_39632} {RNA1310_35459.1} {RNA815_40343}
15.	MligTC455_00203	3	0.06	Mlig455_051710	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_051710 {REF} {Length: 302} {NoTransDecoderORF}
16.	MligTC455_11764	3	0.05	Mlig455_038701	Neo: - Age: -	ASIC5	0.951	-	-	-	-	0.951	-	Mlig455_038701 {REF} {Length: 2030} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=188.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=64.3, Expect=3e-10]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=64.7, Expect=2e-10]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=63.2, Expect=6e-10]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=105, Expect=8e-24]} {RNA1310_63403} {RNA815_41862}
17.	MligTC455_13276	3	0.06	Mlig455_023464	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_023464 {REF} {Length: 339} {NoTransDecoderORF} {RNA1310_137491}
18.	MligTC455_57301	6	0.13	Mlig455_045739	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_045739 {REF} {Length: 397} {NoTransDecoderORF} {RNA1310_134600}
19.	MligTC455_03139	8	0.16	Mlig455_039544	Neo: - Age: -	PRR9	0.95	-	-	-	-	0.950	-	Mlig455_039544 {REF} {Length: 646} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.5, Expect=2e-07]}
20.	MligTC455_08714	6	0.12	Mlig455_012167	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_012167 {REF} {Length: 312} {NoTransDecoderORF} {RNA1509_29268} {RNA1310_107364} {RNA815_51387}
21.	MligTC455_46184	112	2.33	Mlig455_015504	Neo: - Age: logFC(26M/2M)=0.252 Region-enriched R3: 2.970/0.01671		0.95	-	-	0.950	-	-	-	Mlig455_015504 {REF} {Length: 4433} {Pfam: Retinol binding protein receptor [PF14752.8, score=277.3]} {Mouse: ENSMUSG00000028327, Stra6l, STRA6-like, [Score=86.3, Expect=5e-17]} {Smed: dd_Smed_v6_10051_0_1, dd_Smed_v6_10051_0_1, [RH, Score=125, Expect=1e-29]} {RNA1509_20697, RNA1509_32253} {RNA1310_3008.1, RNA1509_20697, RNA1509_32253} {RNA1509_20697, RNA1509_32253, RNA815_2696.1}
22.	MligTC455_53947	284	5.92	Mlig455_053882	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.667/0.02972 Regeneration-upregulated BL: 4.618 Regeneration-enriched BL: 4.618	CHAF1B	0.95	-	-	-	-	-	0.950	Mlig455_053882 {REF} {Length: 5719} {Pfam: WD domain, G-beta repeat [PF00400.34, score=70.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=28.7]} {Human: ENSG00000159259, CHAF1B, chromatin assembly factor 1 subunit B, [RH, Score=340, Expect=2e-109]} {Mouse: ENSMUSG00000022945, Chaf1b, chromatin assembly factor 1, subunit B (p60), [RH, Score=337, Expect=2e-108]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [RH, Score=271, Expect=1e-81]} {Celegans: WBGene00022141, chaf-2, CHromatin Assembly Factor, [RH, Score=144, Expect=2e-37]} {Smed: dd_Smed_v6_5543_0_1, dd_Smed_v6_5543_0_1, [RH, Score=313, Expect=2e-100]} {RNA1509_15575, RNA1509_25473} {RNA1310_9688, RNA1509_15575, RNA1509_25473} {RNA1509_15575, RNA1509_25473, RNA815_11424}