TomoSeq data search

Data search

Results for MligTC455_40280

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40280

66

1.38

Mlig455_043098

Neo: Int S/G2/M

Age: Up-Down-Up

Mlig455_043098 {REF} {Length: 2243} {Pfam: Delta serrate ligand [PF01414.21, score=31.5]} {RNA1509_39924} {RNA1310_12761.1} {RNA815_3894.1}

Cumulative graph for MligTC455_40280

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.835	1.49	1.00000	1.00000
RegionR2	0.904	1.49	0.48574	0.86879
RegionR3	0.779	1.49	0.49642	0.99267
RegionR4	0.854	1.49	0.46741	0.79556
RegionR5	1.253	1.49	0.28039	0.60883
RegionR6	1.396	1.49	0.26753	0.85598
RegionR7	-3.179	1.49	0.99961	1.00000
RegionR8	0.829	1.49	0.64261	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.936	1.49	0.99995	1.00000
RegenerationR2	0.051	1.49	0.95783	1.00000
RegenerationR3	0.317	1.49	0.78478	0.97727
RegenerationR4	0.391	1.49	0.70083	0.95403
RegenerationR5	0.057	1.49	0.95398	1.00000
RegenerationR6	0.028	1.49	0.99234	1.00000
RegenerationBL	1.065	1.49	0.47386	0.84008
RegenerationTP	3.049	1.49	0.12278	0.53155

Genes with expression patterns similar to MligTC455_40280

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40280	66	1.38	Mlig455_043098	Neo: Int S/G2/M Age: Up-Down-Up		3	-	-	1.000	-	1.000	1.000	Mlig455_043098 {REF} {Length: 2243} {Pfam: Delta serrate ligand [PF01414.21, score=31.5]} {RNA1509_39924} {RNA1310_12761.1} {RNA815_3894.1}
2.	MligTC455_40281	70	1.46	Mlig455_043108	Neo: - Age: -		2.803	-	-	0.955	-	0.891	0.957	Mlig455_043108 {REF} {Length: 1772} {Pfam: TMEM154 protein family [PF15102.8, score=23.3]} {RNA1509_39924} {RNA1310_12761.1} {RNA815_3894.1}
3.	MligTC455_03964	84	1.76	Mlig455_010902	Neo: - Age: - Region-enriched R4: 6.854/0.00058 Region-enriched R5: 4.371/0.00149		0.972	-	-	0.972	-	-	-	Mlig455_010902 {REF} {Length: 463} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=25.0]} {Smed: dd_Smed_v6_3953_0_1, dd_Smed_v6_3953_0_1, [Score=46.2, Expect=3e-08]} {RNA1509_21207} {RNA1310_23274} {RNA815_28192}
4.	MligTC455_24825	105	2.19	Mlig455_011292	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_011292 {REF} {Length: 3653} {RNA1509_43125} {RNA1310_9297, RNA1509_43125} {RNA1509_43125, RNA815_39862}
5.	MligTC455_42890	236	4.91	Mlig455_022504	Neo: - Age: logFC(26M/2M)=-0.269 Region-enriched R4: 2.592/0.03886	NOTCH1	0.951	-	-	-	-	0.951	-	Mlig455_022504 {REF} {Length: 3820} {Pfam: Calcium-binding EGF domain [PF07645.17, score=77.2]; EGF-like domain [PF00008.29, score=65.8]; Delta serrate ligand [PF01414.21, score=41.8]; Human growth factor-like EGF [PF12661.9, score=38.5]; EGF-like domain [PF07974.15, score=26.9]; EGF domain [PF12947.9, score=23.0]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=130, Expect=5e-31]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=129, Expect=6e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=127, Expect=3e-30]; ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=126, Expect=1e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=3e-29]} {Dmel: FBgn0004647, N, Notch, [Score=134, Expect=3e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=7e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}

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