Data search
Results for MligTC455_03964
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_03964 | 84 | 1.76 | Mlig455_010902 | Neo: - Age: - Region-enriched R4: 6.854/0.00058 |
Mlig455_010902 {REF} {Length: 463} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=25.0]} {Smed: dd_Smed_v6_3953_0_1, dd_Smed_v6_3953_0_1, [Score=46.2, Expect=3e-08]} {RNA1509_21207} {RNA1310_23274} {RNA815_28192} |
Cumulative graph for MligTC455_03964
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.304 | 1.796 | 0.99962 | 1.00000 | |
| RegionR2 | -1.595 | 1.796 | 0.91993 | 1.00000 | |
| RegionR3 | 0.871 | 1.796 | 0.42843 | 0.94917 | |
| RegionR4 | 6.854 | 1.796 | 0.00003 | 0.00058 | |
| RegionR5 | 4.371 | 1.796 | 0.00009 | 0.00149 | |
| RegionR6 | 2.722 | 1.796 | 0.03030 | 0.32179 | |
| RegionR7 | -4.35 | 1.796 | 1.00000 | 1.00000 | |
| RegionR8 | -4.569 | 1.796 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.25 | 1.796 | 0.99991 | 1.00000 | |
| RegenerationR2 | 0.745 | 1.796 | 0.48369 | 0.86457 | |
| RegenerationR3 | -0.841 | 1.796 | 0.42003 | 0.81507 | |
| RegenerationR4 | -1.143 | 1.796 | 0.25994 | 0.70810 | |
| RegenerationR5 | -1.636 | 1.796 | 0.06386 | 0.39947 | |
| RegenerationR6 | -1.129 | 1.796 | 0.26128 | 0.61122 | |
| RegenerationBL | 2.442 | 1.796 | 0.23885 | 0.59262 | |
| RegenerationTP | 3.287 | 1.796 | 0.21491 | 0.65760 |
Genes with expression patterns similar to MligTC455_03964
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_03964 | 84 | 1.76 | Mlig455_010902 | Neo: - Age: - Region-enriched R4: 6.854/0.00058 |
4 | 1.000 | - | 1.000 | 1.000 | - | 1.000 | Mlig455_010902 {REF} {Length: 463} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=25.0]} {Smed: dd_Smed_v6_3953_0_1, dd_Smed_v6_3953_0_1, [Score=46.2, Expect=3e-08]} {RNA1509_21207} {RNA1310_23274} {RNA815_28192} | |
| 2. | MligTC455_40280 | 66 | 1.38 | Mlig455_043098 | Neo: Int S/G2/M Age: Up-Down-Up |
0.972 | - | - | 0.972 | - | - | - | Mlig455_043098 {REF} {Length: 2243} {Pfam: Delta serrate ligand [PF01414.21, score=31.5]} {RNA1509_39924} {RNA1310_12761.1} {RNA815_3894.1} | |
| 3. | MligTC455_33189 | 347 | 7.24 | Mlig455_041066, Mlig455_064709 | Neo: - Age: - |
LRRC7 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_041066 {REF} {Length: 3640} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=117.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=92.1]; PDZ domain [PF00595.26, score=34.0]; PDZ domain [PF17820.3, score=28.3]; PDZ domain [PF13180.8, score=27.0]} {Human: ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=286, Expect=9e-80]; ENSG00000112851, ERBIN, erbb2 interacting protein, [Score=272, Expect=2e-75]} {Mouse: ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=286, Expect=3e-80]} {Dmel: FBgn0263289, scrib, scribbled, [Score=280, Expect=5e-78]} {Celegans: WBGene00002632, let-413, [Score=238, Expect=6e-67]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=265, Expect=2e-74]} {RNA1509_49092} {RNA1310_13850.1} {RNA815_4016} Mlig455_064709 {REF} {Length: 3782} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=119.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=92.2]; PDZ domain [PF00595.26, score=34.3]; PDZ domain [PF17820.3, score=28.2]; PDZ domain [PF13180.8, score=26.8]} {Human: ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=280, Expect=6e-78]; ENSG00000112851, ERBIN, erbb2 interacting protein, [Score=273, Expect=1e-75]} {Mouse: ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=281, Expect=3e-78]; ENSMUSG00000021709, Erbin, Erbb2 interacting protein, [Score=268, Expect=5e-74]} {Dmel: FBgn0263289, scrib, scribbled, [Score=276, Expect=1e-76]} {Celegans: WBGene00002632, let-413, [Score=236, Expect=2e-66]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=261, Expect=4e-73]} {RNA1509_49092} {RNA1310_13850.1, RNA1509_49092} {RNA1509_49092, RNA815_4016} |
| 4. | MligTC455_15840 | 1863 | 38.82 | Mlig455_040113, Mlig455_067337 | Neo: - Age: logFC(26M/2M)=-0.443 |
RBM38 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_040113 {REF} {Length: 2002} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.7]; RNA recognition motif [PF16367.7, score=21.1]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=157, Expect=1e-46]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=153, Expect=4e-45]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=70.1, Expect=3e-13]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=164, Expect=2e-49]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=182, Expect=3e-56]} {RNA1509_22957, RNA1509_34069} {RNA1310_17663.1, RNA1509_34069} {RNA1509_34069, RNA815_27930} Mlig455_067337 {REF} {Length: 3523} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.9]; RNA recognition motif [PF16367.7, score=20.7]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=155, Expect=7e-45]; ENSG00000112183, RBM24, RNA binding motif protein 24, [RH, Score=149, Expect=2e-42]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=151, Expect=2e-43]; ENSMUSG00000038132, Rbm24, RNA binding motif protein 24, [RH, Score=150, Expect=3e-43]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=162, Expect=6e-48]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=179, Expect=6e-54]} {RNA1509_22957} {RNA1310_17663.1} {RNA815_27930} |
| 5. | MligTC455_46730 | 96 | 1.99 | Mlig455_024629 | Neo: Int S/G2/M Age: - |
0.957 | - | - | 0.957 | - | - | - | Mlig455_024629 {REF} {Length: 1676} {TRANSSPLICED} {RNA1509_48335} {RNA1310_57225} {RNA815_34102} | |
| 6. | MligTC455_35609 | 55 | 1.14 | Mlig455_066387 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_066387 {REF} {Length: 4074} {TRANSSPLICED} {Pfam: RING-type zinc-finger [PF13445.8, score=31.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.4]; Ring finger domain [PF13639.8, score=24.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.6]; zinc-RING finger domain [PF14634.8, score=21.8]; Prokaryotic RING finger family 4 [PF14447.8, score=21.0]} {RNA1509_23091} {RNA1310_4343} {RNA815_2957.1} | |
| 7. | MligTC455_41379 | 237 | 4.93 | Mlig455_010916 | Neo: - Age: logFC(26M/2M)=-0.362 Region-enriched R2: 2.033/0.03884 |
LRRC63 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_010916 {REF} {Length: 3357} {Pfam: Leucine rich repeat [PF13855.8, score=63.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.4]; Leucine Rich repeat [PF13516.8, score=23.2]; Leucine Rich Repeat [PF00560.35, score=22.9]} {Human: ENSG00000173988, LRRC63, leucine rich repeat containing 63, [RH, Score=197, Expect=6e-54]} {Mouse: ENSMUSG00000021997, Lrrc63, leucine rich repeat containing 63, [RH, Score=173, Expect=2e-45]} {Dmel: FBgn0038504, Sur-8, [Score=65.1, Expect=1e-10]} {Celegans: WBGene00002632, let-413, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_14985_0_1, dd_Smed_v6_14985_0_1, [Score=117, Expect=6e-28]} {RNA1509_13259} {RNA1310_13580} {RNA815_3945.1} |
| 8. | MligTC455_47157 | 288 | 6 | Mlig455_002803 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_002803 {REF} {Length: 431} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4874} {RNA1310_82389} {RNA815_42310} |