Data search
Results for MligTC455_40307
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40307 | 446 | 9.28 | Mlig455_018587 | Neo: - Age: - |
PPHLN1 | Mlig455_018587 {REF} {Length: 3799} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=35.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=72.8, Expect=1e-13]} {Mouse: ENSMUSG00000079737, 3110001I22Rik, RIKEN cDNA 3110001I22 gene, [RH, Score=72.8, Expect=5e-14]} {Celegans: WBGene00013307, Y57G11C.9, [RH, Score=71.2, Expect=2e-13]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [RH, Score=100, Expect=4e-23]} {RNA1509_18724, RNA1509_42934, RNA1509_53063} {RNA1310_19874, RNA1509_18724, RNA1509_42934, RNA1509_53063} {RNA1509_18724, RNA1509_42934, RNA1509_53063, RNA815_22742} |
Cumulative graph for MligTC455_40307
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.224 | 3.605 | 0.34562 | 0.98936 | |
| RegionR2 | -0.406 | 3.605 | 0.46582 | 0.85190 | |
| RegionR3 | -0.238 | 3.605 | 0.57078 | 1.00000 | |
| RegionR4 | 0.341 | 3.605 | 0.53432 | 0.85748 | |
| RegionR5 | 0.541 | 3.605 | 0.13667 | 0.37865 | |
| RegionR6 | -0.396 | 3.605 | 0.37040 | 0.95095 | |
| RegionR7 | 0.139 | 3.605 | 0.80853 | 1.00000 | |
| RegionR8 | -1.206 | 3.605 | 0.14790 | 0.70044 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.253 | 3.605 | 0.87415 | 1.00000 | |
| RegenerationR2 | 0.448 | 3.605 | 0.29189 | 0.73481 | |
| RegenerationR3 | 0.354 | 3.605 | 0.47060 | 0.84443 | |
| RegenerationR4 | -0.267 | 3.605 | 0.60420 | 0.91502 | |
| RegenerationR5 | 0.166 | 3.605 | 0.69262 | 0.94885 | |
| RegenerationR6 | 0.787 | 3.605 | 0.11605 | 0.41933 | |
| RegenerationBL | 1.006 | 3.605 | 0.11096 | 0.39295 | |
| RegenerationTP | -0.226 | 3.605 | 0.76685 | 1.00000 |
Genes with expression patterns similar to MligTC455_40307
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40307 | 446 | 9.28 | Mlig455_018587 | Neo: - Age: - |
PPHLN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018587 {REF} {Length: 3799} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=35.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=72.8, Expect=1e-13]} {Mouse: ENSMUSG00000079737, 3110001I22Rik, RIKEN cDNA 3110001I22 gene, [RH, Score=72.8, Expect=5e-14]} {Celegans: WBGene00013307, Y57G11C.9, [RH, Score=71.2, Expect=2e-13]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [RH, Score=100, Expect=4e-23]} {RNA1509_18724, RNA1509_42934, RNA1509_53063} {RNA1310_19874, RNA1509_18724, RNA1509_42934, RNA1509_53063} {RNA1509_18724, RNA1509_42934, RNA1509_53063, RNA815_22742} |
| 2. | MligTC455_38084 | 643 | 13.39 | Mlig455_044428, Mlig455_044462 | Neo: - Age: - |
ZNF347, ZNF850 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_044428 {REF} {Length: 5133} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.4]; C2H2-type zinc finger [PF13894.8, score=28.2]; Zinc-finger of C2H2 type [PF12874.9, score=19.4]} {Human: ENSG00000267041, ZNF850, zinc finger protein 850, [Score=54.7, Expect=6e-07]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1} Mlig455_044462 {REF} {Length: 6499} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=88.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.0]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=19.0]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=80.5, Expect=1e-14]; ENSG00000281709, ZNF197, zinc finger protein 197, [Score=78.2, Expect=9e-14]; ENSG00000186448, ZNF197, zinc finger protein 197, [Score=78.2, Expect=9e-14]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=72.0, Expect=3e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=9e-12]} {Dmel: FBgn0261679, CG42726, [Score=57.0, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=52.0, Expect=3e-06]} {RNA1509_47351} {RNA1310_1145} {RNA815_319.1} |
| 3. | MligTC455_18848 | 172 | 3.59 | Mlig455_019290 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 4.472 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_019290 {REF} {Length: 1440} {TRANSSPLICED} {Pfam: SUZ domain [PF12752.9, score=43.1]} {RNA1509_29907, RNA1509_41034} {RNA1310_22799, RNA1509_29907, RNA1509_41034} {RNA1509_29907, RNA1509_41034, RNA815_9711.1} | |
| 4. | MligTC455_15840 | 1863 | 38.82 | Mlig455_040113, Mlig455_067337 | Neo: - Age: logFC(26M/2M)=-0.443 |
RBM38 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_040113 {REF} {Length: 2002} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.7]; RNA recognition motif [PF16367.7, score=21.1]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=157, Expect=1e-46]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=153, Expect=4e-45]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=70.1, Expect=3e-13]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=164, Expect=2e-49]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=182, Expect=3e-56]} {RNA1509_22957, RNA1509_34069} {RNA1310_17663.1, RNA1509_34069} {RNA1509_34069, RNA815_27930} Mlig455_067337 {REF} {Length: 3523} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.9]; RNA recognition motif [PF16367.7, score=20.7]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=155, Expect=7e-45]; ENSG00000112183, RBM24, RNA binding motif protein 24, [RH, Score=149, Expect=2e-42]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=151, Expect=2e-43]; ENSMUSG00000038132, Rbm24, RNA binding motif protein 24, [RH, Score=150, Expect=3e-43]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=162, Expect=6e-48]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=179, Expect=6e-54]} {RNA1509_22957} {RNA1310_17663.1} {RNA815_27930} |
| 5. | MligTC455_46282 | 1935 | 40.32 | Mlig455_010437 | Neo: - Age: - |
NIPSNAP2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_010437 {REF} {Length: 2903} {Pfam: NIPSNAP [PF07978.15, score=131.0]} {Human: ENSG00000146729, NIPSNAP2, nipsnap homolog 2, [RH, Score=210, Expect=9e-67]; ENSG00000184117, NIPSNAP1, nipsnap homolog 1, [RH, Score=202, Expect=9e-64]} {Mouse: ENSMUSG00000029432, Nipsnap2, nipsnap homolog 2, [RH, Score=206, Expect=2e-65]; ENSMUSG00000034285, Nipsnap1, nipsnap homolog 1, [RH, Score=201, Expect=1e-63]} {Dmel: FBgn0030724, Nipsnap, [RH, Score=212, Expect=3e-68]} {Smed: dd_Smed_v6_2078_0_1, dd_Smed_v6_2078_0_1, [RH, Score=244, Expect=7e-81]} {RNA1509_43562} {RNA1310_34826} {RNA815_4580.1} |
| 6. | MligTC455_21066 | 306 | 6.38 | Mlig455_036488 | Neo: - Age: logFC(26M/2M)=-0.511 Region-enriched R2: 1.835/0.04804 |
RABEPK | 0.953 | - | - | 0.953 | - | - | - | Mlig455_036488 {REF} {Length: 3248} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=103.2]; Galactose oxidase, central domain [PF13415.8, score=88.3]; Kelch motif [PF13854.8, score=80.8]; Kelch motif [PF13964.8, score=78.9]; Kelch motif [PF01344.27, score=56.4]; Kelch motif [PF07646.17, score=53.5]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [RH, Score=202, Expect=8e-61]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [RH, Score=195, Expect=3e-58]} {Dmel: FBgn0040344, CG3711, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6387_0_1, dd_Smed_v6_6387_0_1, [Score=56.6, Expect=1e-08]} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1310_16584, RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075, RNA815_18867} |
| 7. | MligTC455_36802 | 2078 | 43.3 | Mlig455_010812 | Neo: - |
FAT1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_010812 {REF} {Length: 8313} {Pfam: Cadherin domain [PF00028.19, score=230.6]; Laminin G domain [PF02210.26, score=95.2]; Cadherin cytoplasmic region [PF01049.19, score=78.0]; Laminin G domain [PF00054.25, score=62.2]; Cadherin-like [PF16184.7, score=29.4]; Bacterial cadherin-like domain [PF17803.3, score=20.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=200, Expect=2e-50]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=182, Expect=5e-45]; ENSMUSG00000016028, Celsr1, cadherin, EGF LAG seven-pass G-type receptor 1, [Score=180, Expect=1e-44]; ENSMUSG00000068740, Celsr2, cadherin, EGF LAG seven-pass G-type receptor 2, [Score=176, Expect=3e-43]} {Dmel: FBgn0015609, CadN, Cadherin-N, [Score=203, Expect=9e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=159, Expect=1e-38]} {Smed: dd_Smed_v6_14778_0_1, dd_Smed_v6_14778_0_1, [Score=109, Expect=1e-23]} {RNA1509_321} {RNA1310_106.1} {RNA815_46.1} |
| 8. | MligTC455_21067 | 312 | 6.49 | Mlig455_037544 | Neo: - Age: Down-Up-Up Region-enriched R2: 1.855/0.04028 |
RABEPK | 0.952 | - | - | 0.952 | - | - | - | Mlig455_037544 {REF} {Length: 2564} {Pfam: Kelch motif [PF13854.8, score=66.3]; Galactose oxidase, central domain [PF13415.8, score=60.7]; Kelch motif [PF13964.8, score=60.5]; Galactose oxidase, central domain [PF13418.8, score=56.2]; Kelch motif [PF01344.27, score=49.0]; Kelch motif [PF07646.17, score=30.5]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [Score=108, Expect=6e-27]} {Dmel: FBgn0040344, CG3711, [Score=58.5, Expect=3e-09]} {RNA1509_13410, RNA1509_24421} {RNA1310_16584, RNA1509_24421} {RNA1509_24421, RNA815_18867} |
| 9. | MligTC455_22837 | 484 | 10.08 | Mlig455_005509, Mlig455_006648, Mlig455_006694, Mlig455_010631, Mlig455_023501, Mlig455_030951, Mlig455_032677 | Neo: - Age: Up-Down-Up |
0.952 | - | - | - | 0.952 | - | - | Mlig455_005509 {REF} {Length: 1003} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} Mlig455_006648 {REF} {Length: 2757} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} Mlig455_006694 {REF} {Length: 1368} {RNA1310_105426} {RNA815_46313} Mlig455_010631 {REF} {Length: 1245} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} Mlig455_023501 {REF} {Length: 1139} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} Mlig455_030951 {REF} {Length: 1003} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} Mlig455_032677 {REF} {Length: 1003} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593} |
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