TomoSeq data search

Data search

Results for MligTC455_40309

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40309	45	0.94	Mlig455_068351	Neo: - Age: -		Mlig455_068351 {REF} {Length: 387} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21339} {RNA815_12138.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40309

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.401	1.352	1.00000	1.00000
RegionR2	0.862	1.352	0.59509	0.94697
RegionR3	-0.175	1.352	0.88331	1.00000
RegionR4	1.621	1.352	0.42454	0.75227
RegionR5	-1.526	1.352	0.98421	1.00000
RegionR6	1.111	1.352	0.57906	1.00000
RegionR7	-3.305	1.352	1.00000	1.00000
RegionR8	1.812	1.352	0.39322	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.322	1.352	0.99988	1.00000
RegenerationR2	3.137	1.352	0.01183	0.17720
RegenerationR3	2.524	1.352	0.09210	0.48918
RegenerationR4	-0.072	1.352	0.95149	1.00000
RegenerationR5	3.028	1.352	0.02725	0.28012
RegenerationR6	-2.568	1.352	0.23518	0.58293
RegenerationBL	2.694	1.352	0.16951	0.49383
RegenerationTP	2.15	1.352	0.32255	0.76702

Genes with expression patterns similar to MligTC455_40309

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40309	45	0.94	Mlig455_068351	Neo: - Age: -		4	1.000	1.000	-	-	1.000	1.000	Mlig455_068351 {REF} {Length: 387} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21339} {RNA815_12138.1}
2.	MligTC455_15508	10	0.21	Mlig455_032619, Mlig455_042911	Neo: - Age: -		1.737	-	-	-	-	0.954	0.783	Mlig455_032619 {REF} {Length: 725} {NoTransDecoderORF} {RNA1310_103707} Mlig455_042911 {REF} {Length: 643} {NoTransDecoderORF} {RNA1310_107023}
3.	MligTC455_50162	73	1.53	Mlig455_042074	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.488	TLR2	0.97	-	-	-	-	0.970	-	Mlig455_042074 {REF} {Length: 2789} {Pfam: Leucine rich repeat [PF13855.8, score=68.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=27.4]} {Human: ENSG00000137462, TLR2, toll like receptor 2, [Score=52.0, Expect=5e-07]} {Dmel: FBgn0028888, CG4168, [Score=48.5, Expect=9e-06]} {RNA1310_9861.1} {RNA815_5552}
4.	MligTC455_11789	8	0.17	Mlig455_038453	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_038453 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_18406} {RNA1310_72809}
5.	MligTC455_16940	139	2.9	Mlig455_040450	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_040450 {REF} {Length: 923} {Pfam: Methyltransferase domain [PF13383.8, score=26.8]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=142, Expect=2e-42]} {RNA1509_5940} {RNA1310_10053.1} {RNA815_19723}
6.	MligTC455_37533	89	1.86	Mlig455_026964, Mlig455_027050	Neo: - Age: Down-Down-Up		0.967	-	-	-	-	-	0.967	Mlig455_026964 {REF} {Length: 848} {NoTransDecoderORF} {RNA1310_9295} {RNA815_34424} Mlig455_027050 {REF} {Length: 2426} {Pfam: Major Facilitator Superfamily [PF07690.18, score=56.6]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=160, Expect=2e-43]} {RNA1310_9295} {RNA815_41444}
7.	MligTC455_18897	296	6.16	Mlig455_013372	Neo: - Age: - Region-enriched R2: 3.633/0.00016	RGS20	0.959	-	-	-	-	0.959	-	Mlig455_013372 {REF} {Length: 1310} {TRANSSPLICED} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=122.1]} {Human: ENSG00000147509, RGS20, regulator of G protein signaling 20, [RH, Score=201, Expect=2e-65]; ENSG00000091844, RGS17, regulator of G protein signaling 17, [RH, Score=196, Expect=5e-64]; ENSG00000171700, RGS19, regulator of G protein signaling 19, [RH, Score=194, Expect=3e-63]} {Mouse: ENSMUSG00000002459, Rgs20, regulator of G-protein signaling 20, [RH, Score=199, Expect=5e-65]; ENSMUSG00000019775, Rgs17, regulator of G-protein signaling 17, [RH, Score=198, Expect=8e-65]} {Dmel: FBgn0028743, Dhit, Double hit, [RH, Score=213, Expect=7e-70]} {Celegans: WBGene00004345, rgs-2, Regulator of G-protein signaling rgs-2, [RH, Score=173, Expect=9e-56]} {Smed: dd_Smed_v6_8877_0_1, dd_Smed_v6_8877_0_1, [RH, Score=187, Expect=4e-58]} {RNA1509_49447} {RNA1310_26662, RNA1509_49447} {RNA1509_49447, RNA815_5788}
8.	MligTC455_23190	7	0.15	Mlig455_034779	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_034779 {REF} {Length: 1925} {NoTransDecoderORF} {RNA1310_129518}
9.	MligTC455_37535	34	0.72	Mlig455_026965, Mlig455_030734	Neo: - Age: logFC(26M/2M)=1.360		0.958	-	-	-	-	-	0.958	Mlig455_026965 {REF} {Length: 1600} {Pfam: Major Facilitator Superfamily [PF07690.18, score=56.3]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=154, Expect=3e-41]} {RNA1310_9295} {RNA815_41444} Mlig455_030734 {REF} {Length: 2425} {Pfam: Major Facilitator Superfamily [PF07690.18, score=57.9]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=158, Expect=2e-42]} {RNA1310_9295} {RNA815_41444}
10.	MligTC455_54743	21	0.44	Mlig455_013519	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_013519 {REF} {Length: 76} {NoTransDecoderORF} {RNA1509_18670} {RNA1310_7739.1} {RNA815_2588}
11.	MligTC455_19457	67	1.4	Mlig455_007620	Neo: - Age: -	ATP6AP2	0.955	-	-	-	-	-	0.955	Mlig455_007620 {REF} {Length: 1869} {Pfam: Renin receptor-like protein [PF07850.16, score=80.5]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=72.8, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.9, Expect=1e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=66.6, Expect=2e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=56.2, Expect=6e-09]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.0, Expect=2e-18]} {RNA1509_44098} {RNA1310_8954} {RNA815_3484.1}
12.	MligTC455_07885	11	0.23	Mlig455_019901	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_019901 {REF} {Length: 265} {TRANSSPLICED} {NoTransDecoderORF}
13.	MligTC455_18607	203	4.23	Mlig455_012344, Mlig455_012722	Neo: - Age: - Region-enriched R2: 3.338/0.02204	ANKRD63	0.954	-	-	-	-	0.954	-	Mlig455_012344 {REF} {Length: 1989} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.3]; Ankyrin repeats (many copies) [PF13637.8, score=67.3]; Ankyrin repeat [PF00023.32, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [RH, Score=129, Expect=1e-33]} {Mouse: ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [RH, Score=129, Expect=1e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=55.5, Expect=5e-08]} {Celegans: WBGene00006882, vab-19, VAB-19, [Score=52.0, Expect=5e-07]} {Smed: dd_Smed_v6_11187_0_1, dd_Smed_v6_11187_0_1, [Score=59.3, Expect=2e-09]} {RNA1310_37830} {RNA815_38436} Mlig455_012722 {REF} {Length: 2256} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.2]; Ankyrin repeats (many copies) [PF13637.8, score=67.3]; Ankyrin repeat [PF00023.32, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [RH, Score=129, Expect=1e-33]} {Mouse: ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [RH, Score=129, Expect=1e-33]} {Dmel: FBgn0031473, CG3104, [Score=54.7, Expect=5e-08]} {Celegans: WBGene00006882, vab-19, VAB-19, [Score=52.0, Expect=5e-07]} {Smed: dd_Smed_v6_11187_0_2, dd_Smed_v6_11187_0_2, [Score=59.7, Expect=1e-09]} {RNA1310_37830} {RNA815_38436}
14.	MligTC455_41003	184	3.83	Mlig455_022941	Neo: - Age: -	PNPLA2	0.954	-	-	-	-	-	0.954	Mlig455_022941 {REF} {Length: 4818} {TRANSSPLICED} {Pfam: Patatin-like phospholipase [PF01734.24, score=37.5]} {Human: ENSG00000177666, PNPLA2, patatin like phospholipase domain containing 2, [RH, Score=206, Expect=7e-59]} {Mouse: ENSMUSG00000025509, Pnpla2, patatin-like phospholipase domain containing 2, [RH, Score=204, Expect=2e-58]} {Dmel: FBgn0036449, bmm, brummer, [RH, Score=248, Expect=5e-74]} {Celegans: WBGene00015484, atgl-1, Patanin-like phospholipase domain-containing protein, [RH, Score=188, Expect=5e-51]} {Smed: dd_Smed_v6_9544_0_1, dd_Smed_v6_9544_0_1, [RH, Score=220, Expect=5e-64]} {RNA1509_31645} {RNA1310_13835} {RNA815_4510}
15.	MligTC455_32875	11	0.23	Mlig455_070722	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_070722 {REF} {Length: 3015} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_96653} {RNA815_34751}
16.	MligTC455_17784	11	0.23	Mlig455_001273	Neo: - Age: - Region-enriched R4: 2.910/0.04306	GABBR1	0.952	-	-	-	-	0.952	-	Mlig455_001273 {REF} {Length: 1909} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=119.7]; Receptor family ligand binding region [PF01094.30, score=29.4]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=166, Expect=1e-43]; ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=165, Expect=5e-43]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=175, Expect=1e-46]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=159, Expect=2e-41]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=97.1, Expect=2e-22]} {RNA1509_32781} {RNA1310_75354} {RNA815_28313}
17.	MligTC455_37701	47	0.98	Mlig455_029831	Neo: - Age: - Region-enriched R2: 8.298/0.02665		0.951	-	-	-	-	0.951	-	Mlig455_029831 {REF} {Length: 724} {RNA1310_73844}
18.	MligTC455_51653	188	3.92	Mlig455_026873, Mlig455_030823, Mlig455_047794	Neo: - Age: Down-Up-Down	DNASE1L1	0.951	-	-	-	-	0.951	-	Mlig455_026873 {REF} {Length: 2133} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=36.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=5e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=4e-51]} {RNA1310_32296.1} {RNA815_27566} Mlig455_030823 {REF} {Length: 2074} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=37.1]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=2e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=1e-51]} {RNA1310_32296.2} {RNA815_27566} Mlig455_047794 {REF} {Length: 1791} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=35.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=3e-51]} {RNA1310_32296.2} {RNA815_27566}
19.	MligTC455_10023	48	0.99	Mlig455_051817	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_051817 {REF} {Length: 3330} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=46.4]} {RNA1310_7348} {RNA815_14995}
20.	MligTC455_43382	30	0.63	Mlig455_035066	Neo: - Age: Up-Up-Down	KIAA0513	0.95	-	-	-	-	0.950	-	Mlig455_035066 {REF} {Length: 5084} {Pfam: Myotubularin protein [PF12335.10, score=30.0]} {Human: ENSG00000135709, KIAA0513, KIAA0513, [RH, Score=107, Expect=7e-25]} {Mouse: ENSMUSG00000031824, 6430548M08Rik, RIKEN cDNA 6430548M08 gene, [RH, Score=107, Expect=5e-25]} {Dmel: FBgn0031858, CG17378, [RH, Score=108, Expect=8e-24]} {Smed: dd_Smed_v6_3628_0_1, dd_Smed_v6_3628_0_1, [RH, Score=123, Expect=2e-30]} {RNA1509_34970} {RNA1310_2885} {RNA815_12050}