TomoSeq data search

Data search

Results for MligTC455_16940

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16940

139

2.90

Mlig455_040450

Neo: -

Age: -

Mlig455_040450 {REF} {Length: 923} {Pfam: Methyltransferase domain [PF13383.8, score=26.8]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=142, Expect=2e-42]} {RNA1509_5940} {RNA1310_10053.1} {RNA815_19723}

Cumulative graph for MligTC455_16940

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.536	2.423	0.13355	0.73373
RegionR2	3.223	2.423	0.01076	0.10556
RegionR3	1.584	2.423	0.06764	0.45936
RegionR4	-3.161	2.423	0.02331	0.11358
RegionR5	1.101	2.423	0.24719	0.56145
RegionR6	1.191	2.423	0.22423	0.80559
RegionR7	-0.39	2.423	0.89210	1.00000
RegionR8	-0.012	2.423	0.92529	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.37	2.423	0.95641	1.00000
RegenerationR2	-0.158	2.423	0.90336	1.00000
RegenerationR3	1.957	2.423	0.07311	0.45202
RegenerationR4	2.73	2.423	0.03388	0.29714
RegenerationR5	0.924	2.423	0.25876	0.69036
RegenerationR6	0.557	2.423	0.62236	0.88209
RegenerationBL	2.782	2.423	0.11074	0.39265
RegenerationTP	2.881	2.423	0.10519	0.50213

Genes with expression patterns similar to MligTC455_16940

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16940	139	2.9	Mlig455_040450	Neo: - Age: -		4	1.000	1.000	-	-	1.000	1.000	Mlig455_040450 {REF} {Length: 923} {Pfam: Methyltransferase domain [PF13383.8, score=26.8]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=142, Expect=2e-42]} {RNA1509_5940} {RNA1310_10053.1} {RNA815_19723}
2.	MligTC455_16939	121	2.51	Mlig455_029567	Neo: Irradiation Age: -		3.533	0.964	0.839	-	-	0.849	0.881	Mlig455_029567 {REF} {Length: 3273} {Pfam: Methyltransferase domain [PF13383.8, score=84.0]; Methyltransferase FkbM domain [PF05050.14, score=40.6]} {Celegans: WBGene00017873, F28A10.5, [Score=52.8, Expect=3e-07]} {Smed: dd_Smed_v6_3107_0_1, dd_Smed_v6_3107_0_1, [Score=185, Expect=2e-53]} {RNA1509_5940} {RNA1310_10053.1, RNA1509_5940} {RNA1509_5940, RNA815_19723}
3.	MligTC455_40309	45	0.94	Mlig455_068351	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_068351 {REF} {Length: 387} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21339} {RNA815_12138.1}
4.	MligTC455_52538	135	2.82	Mlig455_047397	Neo: - Age: -	KCNIP3	0.967	-	-	-	-	-	0.967	Mlig455_047397 {REF} {Length: 1022} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572} {RNA815_13854}
5.	MligTC455_19457	67	1.4	Mlig455_007620	Neo: - Age: -	ATP6AP2	0.965	-	-	-	-	-	0.965	Mlig455_007620 {REF} {Length: 1869} {Pfam: Renin receptor-like protein [PF07850.16, score=80.5]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=72.8, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.9, Expect=1e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=66.6, Expect=2e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=56.2, Expect=6e-09]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.0, Expect=2e-18]} {RNA1509_44098} {RNA1310_8954} {RNA815_3484.1}
6.	MligTC455_39404	172	3.59	Mlig455_039240, Mlig455_053901	Neo: - Age: Down-Up-Down	ASIC1	0.962	-	-	-	-	-	0.962	Mlig455_039240 {REF} {Length: 2885} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134} {RNA815_5943} Mlig455_053901 {REF} {Length: 3001} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134, RNA1509_33503} {RNA1509_33503, RNA815_5943}
7.	MligTC455_13444	381	7.94	Mlig455_068853	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.519		0.958	-	-	-	-	-	0.958	Mlig455_068853 {REF} {Length: 1499} {RNA1509_59159} {RNA1310_70014.1} {RNA815_29540}
8.	MligTC455_40602	960	20	Mlig455_055745	Neo: - Age: - Region-specific R5: 2.285 Region-enriched R5: 1.650/0.00000	DPYD	0.958	0.958	-	-	-	-	-	Mlig455_055745 {REF} {Length: 3128} {Pfam: 4Fe-4S dicluster domain [PF14697.8, score=79.6]; Dihydroorotate dehydrogenase [PF01180.23, score=68.1]; 4Fe-4S dicluster domain [PF12838.9, score=27.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=26.5]; 4Fe-4S dicluster domain [PF13237.8, score=26.2]; 4Fe-4S binding domain [PF00037.29, score=25.2]; 4Fe-4S binding domain [PF12837.9, score=23.3]; 4Fe-4S dicluster domain [PF13534.8, score=19.1]} {Human: ENSG00000188641, DPYD, dihydropyrimidine dehydrogenase, [Score=723, Expect=0.0]} {Mouse: ENSMUSG00000033308, Dpyd, dihydropyrimidine dehydrogenase, [Score=743, Expect=0.0]} {Dmel: FBgn0086450, su(r), suppressor of rudimentary, [Score=682, Expect=0.0]} {Celegans: WBGene00016103, dpyd-1, Dihydropyrimidine dehydrogenase [NADP(+)], [Score=673, Expect=0.0]} {Smed: dd_Smed_v6_2037_0_1, dd_Smed_v6_2037_0_1, [Score=646, Expect=0.0]} {RNA1509_4130} {RNA1310_19136.2} {RNA815_903.1}

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