Data search
Results for MligTC455_40314
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40314 | 1082 | 22.54 | Mlig455_059480 | Neo: - Age: logFC(26M/2M)=-0.210 |
Mlig455_059480 {REF} {Length: 2590} {Smed: dd_Smed_v6_11992_0_1, dd_Smed_v6_11992_0_1, [RH, Score=122, Expect=8e-31]} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1310_17535, RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257, RNA815_6614} |
Cumulative graph for MligTC455_40314
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.273 | 4.636 | 0.74449 | 1.00000 | |
| RegionR2 | 0.291 | 4.636 | 0.48420 | 0.86772 | |
| RegionR3 | 0.127 | 4.636 | 0.71732 | 1.00000 | |
| RegionR4 | 0.181 | 4.636 | 0.66362 | 0.96233 | |
| RegionR5 | -0.562 | 4.636 | 0.11430 | 0.33446 | |
| RegionR6 | -0.018 | 4.636 | 0.95992 | 1.00000 | |
| RegionR7 | -0.101 | 4.636 | 0.81501 | 1.00000 | |
| RegionR8 | 0.355 | 4.636 | 0.46185 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.164 | 4.636 | 0.88114 | 1.00000 | |
| RegenerationR2 | -0.172 | 4.636 | 0.66362 | 0.94299 | |
| RegenerationR3 | -0.396 | 4.636 | 0.35321 | 0.77268 | |
| RegenerationR4 | -0.518 | 4.636 | 0.23843 | 0.68735 | |
| RegenerationR5 | 0.195 | 4.636 | 0.64677 | 0.93080 | |
| RegenerationR6 | -0.903 | 4.636 | 0.04962 | 0.27880 | |
| RegenerationBL | -0.219 | 4.636 | 0.63319 | 0.97358 | |
| RegenerationTP | 0.062 | 4.636 | 0.89789 | 1.00000 |
Genes with expression patterns similar to MligTC455_40314
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40314 | 1082 | 22.54 | Mlig455_059480 | Neo: - Age: logFC(26M/2M)=-0.210 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059480 {REF} {Length: 2590} {Smed: dd_Smed_v6_11992_0_1, dd_Smed_v6_11992_0_1, [RH, Score=122, Expect=8e-31]} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1310_17535, RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257, RNA815_6614} | |
| 2. | MligTC455_42032 | 2450 | 51.05 | Mlig455_000957 | Neo: - Age: - Region-enriched R4: 1.015/0.01038 |
CETN1 | 2.438 | 0.736 | - | - | 0.748 | - | 0.954 | Mlig455_000957 {REF} {Length: 941} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=104.7]; EF-hand domain pair [PF13499.8, score=98.2]; EF-hand domain [PF13405.8, score=82.0]; EF-hand domain pair [PF13833.8, score=71.1]; EF-hand domain [PF14658.8, score=61.8]; EF hand [PF13202.8, score=36.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.1]; EF-hand domain [PF17959.3, score=20.6]} {Human: ENSG00000177143, CETN1, centrin 1, [RH, Score=266, Expect=3e-92]; ENSG00000147400, CETN2, centrin 2, [RH, Score=259, Expect=2e-89]} {Mouse: ENSMUSG00000031347, Cetn2, centrin 2, [RH, Score=261, Expect=2e-90]; ENSMUSG00000050996, Cetn1, centrin 1, [RH, Score=257, Expect=1e-88]} {Dmel: FBgn0040010, CG17493, [RH, Score=238, Expect=3e-81]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=6e-46]} {Smed: dd_Smed_v6_3644_0_1, dd_Smed_v6_3644_0_1, [RH, Score=261, Expect=1e-90]} {RNA1509_20415, RNA1509_32004} {RNA1310_37828, RNA1509_32004} {RNA1509_32004, RNA815_17729} |
| 3. | MligTC455_52467 | 1114 | 23.21 | Mlig455_064177 | Neo: - Age: logFC(26M/2M)=-0.451 Region-enriched R4: 1.522/0.02787 |
C11orf1 | 1.76 | - | - | - | 0.954 | - | 0.806 | Mlig455_064177 {REF} {Length: 1481} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=56.1]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=53.5, Expect=1e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=54.3, Expect=1e-09]} {RNA1509_38176} {RNA1310_51777, RNA1509_38176} {RNA1509_38176, RNA815_26980.1} |
| 4. | MligTC455_45949 | 4322 | 90.03 | Mlig455_003487 | Neo: - Age: logFC(26M/2M)=-0.316 |
MNS1 | 1.719 | 0.763 | - | - | - | - | 0.956 | Mlig455_003487 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=239.7]} {Human: ENSG00000138587, MNS1, meiosis specific nuclear structural 1, [RH, Score=312, Expect=9e-101]} {Mouse: ENSMUSG00000032221, Mns1, meiosis-specific nuclear structural protein 1, [RH, Score=338, Expect=5e-111]} {Smed: dd_Smed_v6_4463_0_1, dd_Smed_v6_4463_0_1, [RH, Score=380, Expect=2e-127]} {RNA1509_17543, RNA1509_30026, RNA1509_43231, RNA1509_5133, RNA1509_8697} {RNA1310_11484, RNA1509_17543, RNA1509_30026, RNA1509_43231, RNA1509_5133, RNA1509_8697} {RNA1509_17543, RNA1509_30026, RNA1509_43231, RNA1509_5133, RNA1509_8697, RNA815_4005} |
| 5. | MligTC455_40431 | 1617 | 33.69 | Mlig455_001071, Mlig455_005584 | Neo: Irradiation Age: logFC(26M/2M)=0.290 Region-enriched R5: 1.292/0.00002 |
HDDC3 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_001071 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=65.4]; HD domain [PF01966.24, score=21.8]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=220, Expect=4e-73]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=221, Expect=9e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=187, Expect=2e-60]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=182, Expect=8e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=1e-66]} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1310_24812, RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471, RNA815_10702.1} Mlig455_005584 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=64.9]; HD domain [PF01966.24, score=21.6]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=222, Expect=5e-74]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=223, Expect=2e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=183, Expect=2e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=8e-67]} {RNA1509_19707} {RNA1310_45800} {RNA815_14376} |
| 6. | MligTC455_39124 | 660 | 13.75 | Mlig455_054446 | Neo: - |
MAP3K19 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_054446 {REF} {Length: 5015} {Pfam: Protein kinase domain [PF00069.27, score=191.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.5]; Ankyrin repeats (3 copies) [PF12796.9, score=65.5]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeat [PF00023.32, score=52.4]; Ankyrin repeat [PF13606.8, score=49.3]; Phosphotransferase enzyme family [PF01636.25, score=31.3]; Fungal protein kinase [PF17667.3, score=28.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=253, Expect=2e-68]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=146, Expect=7e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=158, Expect=2e-41]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=226, Expect=3e-61]} {RNA1509_40012, RNA1509_8258} {RNA1310_1436.1, RNA1509_40012} {RNA1509_40012, RNA815_1740} |
| 7. | MligTC455_05203 | 626 | 13.05 | Mlig455_063689 | Neo: - Age: - Region-enriched R5: 1.244/0.00217 |
PPP5C | 0.958 | - | - | - | - | 0.958 | - | Mlig455_063689 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=122.4]; PPP5 TPR repeat region [PF08321.14, score=99.6]; Tetratricopeptide repeat [PF00515.30, score=40.7]; Tetratricopeptide repeat [PF07719.19, score=40.7]; Tetratricopeptide repeat [PF13428.8, score=31.9]; Tetratricopeptide repeat [PF13174.8, score=26.7]; TPR repeat [PF13414.8, score=26.4]; Tetratricopeptide repeat [PF13181.8, score=25.2]; Tetratricopeptide repeat [PF13371.8, score=19.8]; Tetratricopeptide repeat [PF13424.8, score=19.8]} {Human: ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0005777, PpD3, Protein phosphatase D3, [RH, Score=624, Expect=0.0]} {Celegans: WBGene00012665, pph-5, Serine/threonine-protein phosphatase 5, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [RH, Score=456, Expect=7e-159]} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1310_18809, RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274, RNA815_5683} |
Berezikov Lab - 2020-2021 © ERIBA