TomoSeq data search

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Results for MligTC455_05203

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05203

626

13.05

Mlig455_063689

Neo: -

Age: -

Region-enriched R5: 1.244/0.00217

PPP5C

Mlig455_063689 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=122.4]; PPP5 TPR repeat region [PF08321.14, score=99.6]; Tetratricopeptide repeat [PF00515.30, score=40.7]; Tetratricopeptide repeat [PF07719.19, score=40.7]; Tetratricopeptide repeat [PF13428.8, score=31.9]; Tetratricopeptide repeat [PF13174.8, score=26.7]; TPR repeat [PF13414.8, score=26.4]; Tetratricopeptide repeat [PF13181.8, score=25.2]; Tetratricopeptide repeat [PF13371.8, score=19.8]; Tetratricopeptide repeat [PF13424.8, score=19.8]} {Human: ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0005777, PpD3, Protein phosphatase D3, [RH, Score=624, Expect=0.0]} {Celegans: WBGene00012665, pph-5, Serine/threonine-protein phosphatase 5, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [RH, Score=456, Expect=7e-159]} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1310_18809, RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274, RNA815_5683}

Cumulative graph for MligTC455_05203

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.245	3.927	0.81650	1.00000
RegionR2	0.562	3.927	0.25457	0.63468
RegionR3	-0.025	3.927	0.95270	1.00000
RegionR4	0.257	3.927	0.54617	0.86778
RegionR5	1.244	3.927	0.00014	0.00217
RegionR6	0.013	3.927	0.97373	1.00000
RegionR7	-0.624	3.927	0.29448	0.92941
RegionR8	-1.182	3.927	0.13581	0.67439

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.044	3.927	0.41641	1.00000
RegenerationR2	0.31	3.927	0.43949	0.83992
RegenerationR3	0.95	3.927	0.03484	0.33104
RegenerationR4	-0.033	3.927	0.94077	1.00000
RegenerationR5	-0.277	3.927	0.46949	0.84153
RegenerationR6	0.912	3.927	0.04673	0.27009
RegenerationBL	1.068	3.927	0.07633	0.32259
RegenerationTP	1.478	3.927	0.02343	0.25921

Genes with expression patterns similar to MligTC455_05203

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_05203	626	13.05	Mlig455_063689	Neo: - Age: - Region-enriched R5: 1.244/0.00217	PPP5C	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_063689 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=122.4]; PPP5 TPR repeat region [PF08321.14, score=99.6]; Tetratricopeptide repeat [PF00515.30, score=40.7]; Tetratricopeptide repeat [PF07719.19, score=40.7]; Tetratricopeptide repeat [PF13428.8, score=31.9]; Tetratricopeptide repeat [PF13174.8, score=26.7]; TPR repeat [PF13414.8, score=26.4]; Tetratricopeptide repeat [PF13181.8, score=25.2]; Tetratricopeptide repeat [PF13371.8, score=19.8]; Tetratricopeptide repeat [PF13424.8, score=19.8]} {Human: ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0005777, PpD3, Protein phosphatase D3, [RH, Score=624, Expect=0.0]} {Celegans: WBGene00012665, pph-5, Serine/threonine-protein phosphatase 5, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [RH, Score=456, Expect=7e-159]} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1310_18809, RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274, RNA815_5683}
2.	MligTC455_52938	601	12.53	Mlig455_042119	Neo: Int S/G2/M Age: logFC(26M/2M)=0.182	PDCD11	1.788	-	0.838	-	0.950	-	-	Mlig455_042119 {REF} {Length: 7233} {TRANSSPLICED} {Pfam: S1 RNA binding domain [PF00575.25, score=46.8]; Tetratricopeptide repeat [PF14559.8, score=29.0]; Tetratricopeptide repeat [PF13432.8, score=20.4]} {Human: ENSG00000148843, PDCD11, programmed cell death 11, [RH, Score=221, Expect=3e-57]} {Mouse: ENSMUSG00000025047, Pdcd11, programmed cell death 11, [RH, Score=203, Expect=8e-52]} {RNA1509_2784} {RNA1310_719, RNA1509_2784} {RNA1509_2784, RNA815_229}
3.	MligTC455_41438	835	17.39	Mlig455_058954	Neo: Int S/G2/M Age: Down-Up-Up	WDR46	1.758	-	-	0.965	0.793	-	-	Mlig455_058954 {REF} {Length: 3385} {TRANSSPLICED} {Pfam: BING4CT (NUC141) domain [PF08149.13, score=81.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.5]} {Human: ENSG00000204221, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000226916, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000236222, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000227057, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000206284, WDR46, WD repeat domain 46, [RH, Score=248, Expect=2e-74]} {Mouse: ENSMUSG00000024312, Wdr46, WD repeat domain 46, [RH, Score=252, Expect=7e-76]} {Dmel: FBgn0030000, CG2260, [RH, Score=257, Expect=3e-78]} {Celegans: WBGene00009211, wdr-46, WD Repeat protein, [RH, Score=250, Expect=5e-76]} {Smed: dd_Smed_v6_10180_0_1, dd_Smed_v6_10180_0_1, [RH, Score=240, Expect=1e-72]} {RNA1509_5871} {RNA1310_17370, RNA1509_5871} {RNA1509_5871, RNA815_4556}
4.	MligTC455_30761	3551	73.99	Mlig455_039585, Mlig455_069818	Neo: - Age: Up-Up-Down		0.969	-	-	-	-	0.969	-	Mlig455_039585 {REF} {Length: 5014} {Pfam: Ammonium Transporter Family [PF00909.23, score=121.3]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=160, Expect=3e-47]} {Celegans: WBGene00000135, amt-3, Putative ammonium transporter 3, [Score=136, Expect=4e-38]} {RNA1509_11254, RNA1509_1200} {RNA1310_29002, RNA1509_11254} {RNA1509_11254, RNA815_7853.1} Mlig455_069818 {REF} {Length: 1115} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
5.	MligTC455_30760	5612	116.91	Mlig455_006073, Mlig455_011942, Mlig455_052693	Neo: - Age: logFC(26M/2M)=1.042		0.965	-	-	-	-	0.965	-	Mlig455_006073 {REF} {Length: 1112} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_011942 {REF} {Length: 1109} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200, RNA1509_21131} {RNA1310_29002, RNA1509_21131} {RNA1509_21131, RNA815_7853.1} Mlig455_052693 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1}
6.	MligTC455_45404	78	1.63	Mlig455_001379	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.729	SLC6A5	0.965	-	-	-	-	0.965	-	Mlig455_001379 {REF} {Length: 6574} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=793.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=421, Expect=3e-128]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=422, Expect=7e-129]} {Dmel: FBgn0034911, CG5549, [Score=395, Expect=1e-115]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=342, Expect=2e-102]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=389, Expect=1e-119]} {RNA1509_14194} {RNA1310_1653.1} {RNA815_6812}
7.	MligTC455_30759	3803	79.23	Mlig455_007018, Mlig455_019153	Neo: - Age: Up-Down-Up, logFC(26M/2M)=5.943		0.964	-	-	-	-	0.964	-	Mlig455_007018 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1} Mlig455_019153 {REF} {Length: 1071} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
8.	MligTC455_30758	1926	40.12	Mlig455_000739	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_000739 {REF} {Length: 672} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_14771.2}
9.	MligTC455_30762	5596	116.58	Mlig455_058999, Mlig455_068841, Mlig455_070941	Neo: - Age: logFC(26M/2M)=0.399		0.962	-	-	-	-	0.962	-	Mlig455_058999 {REF} {Length: 1070} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_068841 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_070941 {REF} {Length: 1067} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
10.	MligTC455_40314	1082	22.54	Mlig455_059480	Neo: - Age: logFC(26M/2M)=-0.210		0.958	-	-	-	-	0.958	-	Mlig455_059480 {REF} {Length: 2590} {Smed: dd_Smed_v6_11992_0_1, dd_Smed_v6_11992_0_1, [RH, Score=122, Expect=8e-31]} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1310_17535, RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257} {RNA1509_15375, RNA1509_35065, RNA1509_35118, RNA1509_54774, RNA1509_5613, RNA1509_56257, RNA815_6614}
11.	MligTC455_39541	375	7.82	Mlig455_067440	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 1.945/0.01758		0.952	-	-	-	0.952	-	-	Mlig455_067440 {REF} {Length: 2613} {TRANSSPLICED} {Pfam: Hemerythrin HHE cation binding domain [PF01814.25, score=53.1]} {RNA1509_49247, RNA1509_55490} {RNA1310_39776, RNA1509_49247, RNA1509_55490} {RNA1509_49247, RNA1509_55490, RNA815_19015}
12.	MligTC455_39212	26	0.55	Mlig455_032317	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_032317 {REF} {Length: 883} {RNA1509_17207} {RNA1310_664.1} {RNA815_31923}
13.	MligTC455_37629	75	1.56	Mlig455_051157	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_051157 {REF} {Length: 1499} {Pfam: Integrase core domain [PF00665.28, score=31.3]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=55.8, Expect=8e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
14.	MligTC455_41602	701	14.6	Mlig455_000984	Neo: Int S/G2/M Age: - Region-enriched R5: 1.342/0.02989		0.95	-	-	0.950	-	-	-	Mlig455_000984 {REF} {Length: 2204} {TRANSSPLICED} {Pfam: DCC1-like thiol-disulfide oxidoreductase [PF04134.14, score=75.2]} {RNA1509_10364} {RNA1310_36209} {RNA815_17788.1}

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