Data search
Results for MligTC455_40324
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40324 | 1334 | 27.79 | Mlig455_011153, Mlig455_050865 | Neo: - Age: Down-Down-Up |
Mlig455_011153 {REF} {Length: 1364} {RNA1509_34943} {RNA1310_14839} {RNA815_5587.1} Mlig455_050865 {REF} {Length: 2515} {RNA1509_34943} {RNA1310_14839, RNA1509_34943} {RNA1509_34943, RNA815_5587.1} |
Cumulative graph for MligTC455_40324
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.039 | 5.078 | 0.09852 | 0.66387 | |
| RegionR2 | -0.211 | 5.078 | 0.66061 | 0.99262 | |
| RegionR3 | 0.033 | 5.078 | 0.92861 | 1.00000 | |
| RegionR4 | 0.666 | 5.078 | 0.15438 | 0.40728 | |
| RegionR5 | 0.143 | 5.078 | 0.70103 | 1.00000 | |
| RegionR6 | 0.431 | 5.078 | 0.25930 | 0.84716 | |
| RegionR7 | 0.639 | 5.078 | 0.13879 | 0.69813 | |
| RegionR8 | 0.337 | 5.078 | 0.50606 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.264 | 5.078 | 0.90157 | 1.00000 | |
| RegenerationR2 | 0.368 | 5.078 | 0.35372 | 0.78420 | |
| RegenerationR3 | 0.23 | 5.078 | 0.59634 | 0.90648 | |
| RegenerationR4 | 0.067 | 5.078 | 0.88361 | 1.00000 | |
| RegenerationR5 | -0.365 | 5.078 | 0.38374 | 0.78854 | |
| RegenerationR6 | -0.216 | 5.078 | 0.61080 | 0.87473 | |
| RegenerationBL | -0.452 | 5.078 | 0.30930 | 0.67467 | |
| RegenerationTP | -0.278 | 5.078 | 0.55360 | 0.93559 |
Genes with expression patterns similar to MligTC455_40324
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40324 | 1334 | 27.79 | Mlig455_011153, Mlig455_050865 | Neo: - Age: Down-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011153 {REF} {Length: 1364} {RNA1509_34943} {RNA1310_14839} {RNA815_5587.1} Mlig455_050865 {REF} {Length: 2515} {RNA1509_34943} {RNA1310_14839, RNA1509_34943} {RNA1509_34943, RNA815_5587.1} |
|
| 2. | MligTC455_33802 | 659 | 13.73 | Mlig455_033383 | Neo: - Age: logFC(26M/2M)=-0.359 |
1.842 | - | - | - | 0.964 | - | 0.878 | Mlig455_033383 {REF} {Length: 3524} {RNA1509_14410, RNA1509_56133} {RNA1310_8398, RNA1509_56133} {RNA1509_56133, RNA815_14639} | |
| 3. | MligTC455_44430 | 443 | 9.23 | Mlig455_038205 | Neo: - Age: - Region-enriched R4: 1.488/0.02620 |
DNAJC27 | 1.698 | - | - | - | 0.953 | - | 0.745 | Mlig455_038205 {REF} {Length: 1380} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=137.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.1]; ADP-ribosylation factor family [PF00025.23, score=53.3]; DnaJ domain [PF00226.33, score=47.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.5]; 50S ribosome-binding GTPase [PF01926.25, score=20.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.1]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [RH, Score=325, Expect=3e-112]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [RH, Score=328, Expect=2e-113]} {Dmel: FBgn0005586, Rab3, [Score=107, Expect=7e-28]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [Score=111, Expect=2e-29]} {Smed: dd_Smed_v6_11963_0_1, dd_Smed_v6_11963_0_1, [RH, Score=337, Expect=3e-117]} {RNA1509_21104} {RNA1310_24516} {RNA815_10551} |
| 4. | MligTC455_20265 | 883 | 18.39 | Mlig455_004042 | Neo: - Age: Down-Down-Up |
ANK3 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_004042 {REF} {Length: 4511} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=118.6]; Ankyrin repeat [PF00023.32, score=98.3]; Ankyrin repeats (many copies) [PF13637.8, score=89.2]; Ankyrin repeats (many copies) [PF13857.8, score=84.4]; Ankyrin repeat [PF13606.8, score=73.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=127, Expect=8e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=126, Expect=2e-28]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=124, Expect=5e-28]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=121, Expect=3e-27]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=121, Expect=2e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=119, Expect=7e-27]} {RNA1509_9109} {RNA1310_24854.1} {RNA815_11486} |
| 5. | MligTC455_26421 | 116 | 2.41 | Mlig455_006485 | Neo: - |
RAPGEF2 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_006485 {REF} {Length: 8114} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=127.5]; PDZ domain [PF17820.3, score=38.4]; PDZ domain [PF00595.26, score=31.6]; RasGEF N-terminal motif [PF00618.22, score=30.3]; Cyclic nucleotide-binding domain [PF00027.31, score=25.8]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=24.1]; PDZ domain [PF13180.8, score=23.1]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [RH, Score=476, Expect=2e-144]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [RH, Score=478, Expect=4e-145]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [RH, Score=262, Expect=6e-71]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [RH, Score=222, Expect=1e-58]} {Smed: dd_Smed_v6_4950_0_3, dd_Smed_v6_4950_0_3, [RH, Score=434, Expect=2e-129]} {RNA1509_7322} {RNA1310_804.3} {RNA815_1044} |
| 6. | MligTC455_29572 | 245 | 5.1 | Mlig455_050386 | Neo: - Age: Down-Down-Up |
TRAF3 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_050386 {REF} {Length: 3641} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=39.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=18.8]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=305, Expect=2e-96]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=304, Expect=5e-96]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=295, Expect=1e-92]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=295, Expect=1e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=102, Expect=7e-23]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [RH, Score=181, Expect=1e-50]} {RNA1509_2193, RNA1509_51178} {RNA1310_5587.1, RNA1509_2193, RNA1509_51178} {RNA1509_2193, RNA1509_51178, RNA815_4083.2} |
| 7. | MligTC455_16384 | 177 | 3.68 | Mlig455_053786 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_053786 {REF} {Length: 1773} {RNA1509_22149} {RNA1310_32048} {RNA815_12368} | |
| 8. | MligTC455_40581 | 643 | 13.4 | Mlig455_048424, Mlig455_048567 | Neo: Irradiation Age: logFC(26M/2M)=0.697 |
POGZ | 0.953 | - | - | 0.953 | - | - | - | Mlig455_048424 {REF} {Length: 2507} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.6]; C2H2-type zinc finger [PF13894.8, score=22.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.0]} {Human: ENSG00000143442, POGZ, pogo transposable element derived with ZNF domain, [RH, Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000038902, Pogz, pogo transposable element with ZNF domain, [RH, Score=131, Expect=3e-31]} {Smed: dd_Smed_v6_2118_0_1, dd_Smed_v6_2118_0_1, [Score=212, Expect=5e-59]} {RNA1509_5429} {RNA1310_8161} {RNA815_4388} Mlig455_048567 {REF} {Length: 2583} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.3]; C2H2-type zinc finger [PF13894.8, score=22.1]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.2]} {Human: ENSG00000143442, POGZ, pogo transposable element derived with ZNF domain, [RH, Score=129, Expect=3e-30]} {Mouse: ENSMUSG00000038902, Pogz, pogo transposable element with ZNF domain, [RH, Score=131, Expect=3e-31]} {Smed: dd_Smed_v6_2118_0_1, dd_Smed_v6_2118_0_1, [RH, Score=223, Expect=7e-63]} {RNA1509_5429} {RNA1310_8161} {RNA815_4388} |
| 9. | MligTC455_49565 | 210 | 4.37 | Mlig455_000357 | Neo: - Age: Down-Up-Up |
0.95 | - | - | - | 0.950 | - | - | Mlig455_000357 {REF} {Length: 1051} {RNA1509_22287} {RNA1310_42170} {RNA815_20808} | |
| 10. | MligTC455_51954 | 1404 | 29.25 | Mlig455_038586 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_038586 {REF} {Length: 2052} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.1]} {RNA1509_11900, RNA1509_20653} {RNA1310_15381, RNA1509_11900, RNA1509_20653} {RNA1509_11900, RNA1509_20653, RNA815_5778} |
Berezikov Lab - 2020-2021 © ERIBA