TomoSeq data search

Data search

Results for MligTC455_40372

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40372	125	2.60	Mlig455_070379	Neo: - Age: - Region-enriched R2: 4.177/0.01060	FCF1	Mlig455_070379 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=112.4]; PIN like domain [PF18477.3, score=29.5]} {Human: ENSG00000119616, FCF1, FCF1, rRNA-processing protein, [RH, Score=239, Expect=1e-80]} {Mouse: ENSMUSG00000021243, Fcf1, FCF1 rRNA processing protein, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0010520, Bka, Bekka, [RH, Score=231, Expect=1e-77]} {Celegans: WBGene00009266, F30A10.9, [RH, Score=234, Expect=4e-79]} {Smed: dd_Smed_v6_8522_0_1, dd_Smed_v6_8522_0_1, [RH, Score=212, Expect=2e-70]} {RNA1509_14109, RNA1509_25561, RNA1509_51495} {RNA1310_26980, RNA1509_14109, RNA1509_51495} {RNA1509_14109, RNA1509_51495, RNA815_17227}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40372

125

2.60

Mlig455_070379

Neo: -

Age: -

Region-enriched R2: 4.177/0.01060

FCF1

Mlig455_070379 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=112.4]; PIN like domain [PF18477.3, score=29.5]} {Human: ENSG00000119616, FCF1, FCF1, rRNA-processing protein, [RH, Score=239, Expect=1e-80]} {Mouse: ENSMUSG00000021243, Fcf1, FCF1 rRNA processing protein, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0010520, Bka, Bekka, [RH, Score=231, Expect=1e-77]} {Celegans: WBGene00009266, F30A10.9, [RH, Score=234, Expect=4e-79]} {Smed: dd_Smed_v6_8522_0_1, dd_Smed_v6_8522_0_1, [RH, Score=212, Expect=2e-70]} {RNA1509_14109, RNA1509_25561, RNA1509_51495} {RNA1310_26980, RNA1509_14109, RNA1509_51495} {RNA1509_14109, RNA1509_51495, RNA815_17227}

Cumulative graph for MligTC455_40372

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.103	2.234	0.99959	1.00000
RegionR2	4.177	2.234	0.00037	0.01060
RegionR3	2.412	2.234	0.01417	0.19058
RegionR4	-0.951	2.234	0.92854	1.00000
RegionR5	0.896	2.234	0.41636	0.77619
RegionR6	0.92	2.234	0.42842	0.99291
RegionR7	3.144	2.234	0.00790	0.14832
RegionR8	-3.495	2.234	0.99980	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.073	2.234	0.99964	1.00000
RegenerationR2	0.269	2.234	0.73152	0.96608
RegenerationR3	1.232	2.234	0.16451	0.59866
RegenerationR4	2.226	2.234	0.02151	0.23289
RegenerationR5	0.284	2.234	0.68758	0.94691
RegenerationR6	2.894	2.234	0.00348	0.06960
RegenerationBL	3.771	2.234	0.01407	0.12355
RegenerationTP	3.436	2.234	0.09265	0.47795

Genes with expression patterns similar to MligTC455_40372

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40372	125	2.6	Mlig455_070379	Neo: - Age: - Region-enriched R2: 4.177/0.01060	FCF1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_070379 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=112.4]; PIN like domain [PF18477.3, score=29.5]} {Human: ENSG00000119616, FCF1, FCF1, rRNA-processing protein, [RH, Score=239, Expect=1e-80]} {Mouse: ENSMUSG00000021243, Fcf1, FCF1 rRNA processing protein, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0010520, Bka, Bekka, [RH, Score=231, Expect=1e-77]} {Celegans: WBGene00009266, F30A10.9, [RH, Score=234, Expect=4e-79]} {Smed: dd_Smed_v6_8522_0_1, dd_Smed_v6_8522_0_1, [RH, Score=212, Expect=2e-70]} {RNA1509_14109, RNA1509_25561, RNA1509_51495} {RNA1310_26980, RNA1509_14109, RNA1509_51495} {RNA1509_14109, RNA1509_51495, RNA815_17227}
2.	MligTC455_52612	22	0.47	Mlig455_035013	Neo: Irradiation Age: Up-Down-Down		0.967	-	-	-	0.967	-	-	Mlig455_035013 {REF} {Length: 1616} {Pfam: FHA domain [PF00498.28, score=43.9]; PHD-finger [PF00628.31, score=26.4]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [RH, Score=135, Expect=5e-36]} {RNA1509_20895, RNA1509_51175} {RNA1310_11328, RNA1509_20895, RNA1509_51175} {RNA1509_20895, RNA1509_51175, RNA815_15343}
3.	MligTC455_41516	213	4.44	Mlig455_008433, Mlig455_071057	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_008433 {REF} {Length: 2584} {TRANSSPLICED} {RNA1509_43114} {RNA1310_1791.1} {RNA815_16210} Mlig455_071057 {REF} {Length: 360} {NoTransDecoderORF} {RNA1509_43466} {RNA1310_1633.2} {RNA815_42235.1}
4.	MligTC455_42873	90	1.88	Mlig455_012965	Neo: - Age: Down-Up-Up		0.957	-	-	-	-	0.957	-	Mlig455_012965 {REF} {Length: 1943} {Pfam: PAN domain [PF00024.28, score=22.0]} {RNA1310_27048} {RNA815_38245}
5.	MligTC455_50155	542	11.29	Mlig455_010493	Neo: - Age: Down-Down-Up Regeneration-upregulated BL: 2.962 Regeneration-enriched BL: 2.962	BEST2	0.952	-	-	-	-	0.952	-	Mlig455_010493 {REF} {Length: 2707} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=157.0]} {Human: ENSG00000039987, BEST2, bestrophin 2, [Score=102, Expect=2e-22]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=103, Expect=6e-23]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=178, Expect=6e-48]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=146, Expect=2e-37]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=235, Expect=7e-71]} {RNA1509_40942} {RNA1310_14129.1} {RNA815_5240}