Data search
Results for MligTC455_52612
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52612 | 22 | 0.47 | Mlig455_035013 | Neo: Irradiation Age: Up-Down-Down |
Mlig455_035013 {REF} {Length: 1616} {Pfam: FHA domain [PF00498.28, score=43.9]; PHD-finger [PF00628.31, score=26.4]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [RH, Score=135, Expect=5e-36]} {RNA1509_20895, RNA1509_51175} {RNA1310_11328, RNA1509_20895, RNA1509_51175} {RNA1509_20895, RNA1509_51175, RNA815_15343} |
Cumulative graph for MligTC455_52612
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.962 | 0.858 | 1.00000 | 1.00000 | |
| RegionR2 | -4.174 | 0.858 | 0.99954 | 1.00000 | |
| RegionR3 | 1.449 | 0.858 | 0.36238 | 0.89804 | |
| RegionR4 | 5.719 | 0.858 | 0.03557 | 0.15311 | |
| RegionR5 | 1.997 | 0.858 | 0.21602 | 0.51541 | |
| RegionR6 | -1.752 | 0.858 | 0.99945 | 1.00000 | |
| RegionR7 | 1.266 | 0.858 | 0.72407 | 1.00000 | |
| RegionR8 | -2.543 | 0.858 | 0.99929 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.166 | 0.858 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.098 | 0.858 | 1.00000 | 1.00000 | |
| RegenerationR3 | -3.116 | 0.858 | 0.31395 | 0.74390 | |
| RegenerationR4 | -1.663 | 0.858 | 0.41883 | 0.82518 | |
| RegenerationR5 | -0.669 | 0.858 | 0.65346 | 0.93351 | |
| RegenerationR6 | 1.599 | 0.858 | 0.55352 | 0.84121 | |
| RegenerationBL | -1.583 | 0.858 | 0.99953 | 1.00000 | |
| RegenerationTP | 1.766 | 0.858 | 0.76624 | 1.00000 |
Genes with expression patterns similar to MligTC455_52612
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52612 | 22 | 0.47 | Mlig455_035013 | Neo: Irradiation Age: Up-Down-Down |
4 | 1.000 | - | 1.000 | 1.000 | - | 1.000 | Mlig455_035013 {REF} {Length: 1616} {Pfam: FHA domain [PF00498.28, score=43.9]; PHD-finger [PF00628.31, score=26.4]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [RH, Score=135, Expect=5e-36]} {RNA1509_20895, RNA1509_51175} {RNA1310_11328, RNA1509_20895, RNA1509_51175} {RNA1509_20895, RNA1509_51175, RNA815_15343} | |
| 2. | MligTC455_11692 | 9 | 0.19 | Mlig455_037965 | Neo: Int S/G2/M Age: - |
0.996 | - | - | 0.996 | - | - | - | Mlig455_037965 {REF} {Length: 1421} {RNA1509_12762} {RNA1310_90485} {RNA815_44022} | |
| 3. | MligTC455_36216 | 27 | 0.57 | Mlig455_016693 | Neo: Irradiation Age: Up-Down-Down |
ASIC2 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_016693 {REF} {Length: 2664} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=195.0]} {Human: ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=68.9, Expect=1e-11]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=67.4, Expect=3e-11]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=52.4, Expect=7e-07]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=220, Expect=3e-63]} {RNA1509_11497} {RNA1310_8960, RNA1509_11497} {RNA1509_11497, RNA815_5436} |
| 4. | MligTC455_26006 | 278 | 5.8 | Mlig455_028111 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_028111 {REF} {Length: 2039} {RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812} {RNA1310_16827, RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812} {RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812, RNA815_5895} | |
| 5. | MligTC455_40372 | 125 | 2.6 | Mlig455_070379 | Neo: - Age: - Region-enriched R2: 4.177/0.01060 |
FCF1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_070379 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=112.4]; PIN like domain [PF18477.3, score=29.5]} {Human: ENSG00000119616, FCF1, FCF1, rRNA-processing protein, [RH, Score=239, Expect=1e-80]} {Mouse: ENSMUSG00000021243, Fcf1, FCF1 rRNA processing protein, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0010520, Bka, Bekka, [RH, Score=231, Expect=1e-77]} {Celegans: WBGene00009266, F30A10.9, [RH, Score=234, Expect=4e-79]} {Smed: dd_Smed_v6_8522_0_1, dd_Smed_v6_8522_0_1, [RH, Score=212, Expect=2e-70]} {RNA1509_14109, RNA1509_25561, RNA1509_51495} {RNA1310_26980, RNA1509_14109, RNA1509_51495} {RNA1509_14109, RNA1509_51495, RNA815_17227} |
| 6. | MligTC455_36890 | 19 | 0.39 | Mlig455_039227 | Neo: - Age: Down-Down-Down |
0.958 | - | - | - | 0.958 | - | - | Mlig455_039227 {REF} {Length: 930} {TRANSSPLICED} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1} | |
| 7. | MligTC455_50120 | 122 | 2.54 | Mlig455_037741 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.412 Region-enriched R4: 3.210/0.03804 |
0.955 | - | - | 0.955 | - | - | - | Mlig455_037741 {REF} {Length: 3983} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=19.2]} {RNA1509_28857} {RNA1310_11679.2, RNA1509_28857} {RNA1509_28857, RNA815_13148} |
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