TomoSeq data search

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Results for MligTC455_40443

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40443

60

1.24

Mlig455_044276

Neo: -

Age: -

Region-enriched R2: 6.055/0.00218

Regeneration-upregulated R4: 4.734

Regeneration-enriched R4: 4.734

Mlig455_044276 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=48.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=19.8]} {RNA1509_25529} {RNA1310_40493.1, RNA1509_25529} {RNA1509_25529, RNA815_17750.1}

Cumulative graph for MligTC455_40443

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.592	1.37	1.00000	1.00000
RegionR2	6.055	1.37	0.00004	0.00218
RegionR3	2.728	1.37	0.02615	0.27613
RegionR4	-2.234	1.37	0.95797	1.00000
RegionR5	1.764	1.37	0.14770	0.39890
RegionR6	1.451	1.37	0.31390	0.90261
RegionR7	-1.906	1.37	1.00000	1.00000
RegionR8	-1.265	1.37	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	11.962	1.37	0.00430	0.33067
RegenerationR2	-0.199	1.37	0.93915	1.00000
RegenerationR3	2.998	1.37	0.00697	0.15224
RegenerationR4	4.734	1.37	0.00007	0.00506	Specific for R4: 4.734
RegenerationR5	1.754	1.37	0.06552	0.40281
RegenerationR6	4.023	1.37	0.00219	0.05322
RegenerationBL	4.831	1.37	0.04655	0.24681
RegenerationTP	7.411	1.37	0.00048	0.03061

Genes with expression patterns similar to MligTC455_40443

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40443	60	1.24	Mlig455_044276	Neo: - Age: - Region-enriched R2: 6.055/0.00218 Regeneration-upregulated R4: 4.734 Regeneration-enriched R4: 4.734		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_044276 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=48.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=19.8]} {RNA1509_25529} {RNA1310_40493.1, RNA1509_25529} {RNA1509_25529, RNA815_17750.1}
2.	MligTC455_18049	3659	76.23	Mlig455_022507, Mlig455_055035	Neo: - Age: -		0.986	-	-	-	-	0.986	-	Mlig455_022507 {REF} {Length: 1498} {Pfam: PLAC8 family [PF04749.19, score=73.4]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1310_55602, RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1509_17309, RNA1509_44969, RNA1509_59075, RNA815_30798} Mlig455_055035 {REF} {Length: 943} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}
3.	MligTC455_49381	1725	35.93	Mlig455_057404	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.373 Regeneration-depleted R2: -2.789 Regeneration-depleted R6: -2.562	DYNLL2	0.983	-	-	-	-	0.983	-	Mlig455_057404 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Dynein light chain type 1 [PF01221.20, score=146.0]} {Human: ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [RH, Score=184, Expect=3e-62]; ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [RH, Score=180, Expect=2e-60]} {Mouse: ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [RH, Score=184, Expect=2e-62]; ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [RH, Score=180, Expect=1e-60]} {Dmel: FBgn0011760, ctp, cut up, [RH, Score=183, Expect=4e-62]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [RH, Score=179, Expect=1e-60]} {Smed: dd_Smed_v6_310_0_1, dd_Smed_v6_310_0_1, [RH, Score=179, Expect=1e-60]} {RNA1509_3492} {RNA1310_35337, RNA1509_3492} {RNA1509_3492, RNA815_5631}
4.	MligTC455_34980	192	4	Mlig455_030455	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.463 Region-enriched R7: 4.905/0.00001		0.975	-	-	-	-	0.975	-	Mlig455_030455 {REF} {Length: 1764} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=94.4]} {Dmel: FBgn0030443, CG12715, [RH, Score=102, Expect=2e-23]} {Celegans: WBGene00012941, Y47D3B.4, [Score=81.3, Expect=2e-16]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=88.6, Expect=6e-19]} {RNA1509_46243} {RNA1310_16593} {RNA815_4190.1}
5.	MligTC455_15849	863	17.97	Mlig455_057363, Mlig455_057368, Mlig455_059567	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_057363 {REF} {Length: 1048} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008} Mlig455_057368 {REF} {Length: 1049} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267, RNA1509_56468} {RNA1509_56468, RNA815_15008} Mlig455_059567 {REF} {Length: 2018} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008}
6.	MligTC455_20243	37509	781.44	Mlig455_033274	Neo: - Age: Down-Down-Up Region-enriched R8: 1.605/0.00415		0.972	-	-	-	-	0.972	-	Mlig455_033274 {REF} {Length: 928} {RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694} {RNA1310_78625, RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694} {RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694, RNA815_37938}
7.	MligTC455_44143	1097	22.84	Mlig455_000462	Neo: Int S/G2/M Age: Down-Up-Down	GTF2H5	0.971	-	-	-	-	0.971	-	Mlig455_000462 {REF} {Length: 302} {TRANSSPLICED} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=90.5]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=78.6, Expect=9e-21]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=77.4, Expect=2e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=84.0, Expect=3e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.9, Expect=2e-15]} {Smed: dd_Smed_v6_12021_0_1, dd_Smed_v6_12021_0_1, [RH, Score=50.8, Expect=2e-10]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}
8.	MligTC455_28759	22924	477.58	Mlig455_015450	Neo: - Age: Up-Down-Up Region-enriched R8: 1.325/0.01787 Regeneration-downregulated BL: -2.091 Regeneration-depleted BL: -2.091		0.967	-	-	-	-	0.967	-	Mlig455_015450 {REF} {Length: 337} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18729} {RNA1310_68532} {RNA815_18679}
9.	MligTC455_29022	2165	45.11	Mlig455_024164	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_024164 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_5629} {RNA1310_95518} {RNA815_5542}
10.	MligTC455_27732	4800	100.01	Mlig455_066409	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_066409 {REF} {Length: 516} {RNA1509_1908, RNA1509_53642} {RNA1310_43281.1, RNA1509_53642} {RNA1509_53642, RNA815_15413.1}
11.	MligTC455_24503	16264	338.83	Mlig455_038666	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.314	RPL28	0.96	-	-	-	-	0.960	-	Mlig455_038666 {REF} {Length: 599} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=99.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=129, Expect=3e-39]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=130, Expect=1e-39]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=101, Expect=2e-28]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [RH, Score=74.3, Expect=4e-18]} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1310_59235, RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040, RNA815_27597}
12.	MligTC455_29016	36522	760.88	Mlig455_005202	Neo: - Age: - Regeneration-enriched R1: 3.026 Regeneration-enriched TP: 2.300 Regeneration-enriched BL: 2.050		0.96	-	-	-	-	0.960	-	Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1}
13.	MligTC455_43061	215	4.47	Mlig455_063586	Neo: - Age: logFC(26M/2M)=0.487	GGT1	0.959	-	-	-	-	0.959	-	Mlig455_063586 {REF} {Length: 3587} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=302.1]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [Score=234, Expect=1e-71]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [Score=226, Expect=6e-68]} {Dmel: FBgn0030796, CG4829, [Score=204, Expect=8e-59]} {Celegans: WBGene00011393, T03D8.6, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_4591_0_3, dd_Smed_v6_4591_0_3, [Score=254, Expect=4e-80]} {RNA1509_44409} {RNA1310_26208} {RNA815_8830}
14.	MligTC455_24114	231	4.82	Mlig455_016686, Mlig455_016687	Neo: - Age: logFC(26M/2M)=-0.296 Region-enriched R7: 3.320/0.00033		0.955	-	-	-	-	0.955	-	Mlig455_016686 {REF} {Length: 2328} {Pfam: EF hand [PF00036.34, score=29.9]; EF-hand domain [PF13405.8, score=29.0]; EF-hand domain pair [PF13499.8, score=23.4]} {Dmel: FBgn0020907, Scp2, Sarcoplasmic calcium-binding protein 2, [RH, Score=117, Expect=7e-33]} {Celegans: WBGene00023408, cex-2, Calexcitin-2, [RH, Score=86.3, Expect=7e-21]} {RNA1509_23461} {RNA1310_36372, RNA1509_23461} {RNA1509_23461, RNA815_14705} Mlig455_016687 {REF} {Length: 945} {Pfam: EF hand [PF00036.34, score=38.8]; EF-hand domain pair [PF13833.8, score=30.7]; Dockerin type I domain [PF00404.20, score=29.9]; EF-hand domain pair [PF13499.8, score=25.2]; EF-hand domain [PF13405.8, score=24.0]} {Dmel: FBgn0020907, Scp2, Sarcoplasmic calcium-binding protein 2, [Score=79.0, Expect=6e-18]} {Celegans: WBGene00023408, cex-2, Calexcitin-2, [Score=44.7, Expect=8e-06]} {RNA1509_23461} {RNA1310_36372} {RNA815_14705}
15.	MligTC455_24502	16230	338.12	Mlig455_019151	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=1.555		0.952	-	-	-	-	0.952	-	Mlig455_019151 {REF} {Length: 618} {NoTransDecoderORF} {RNA1509_23040} {RNA1310_59235} {RNA815_27597}
16.	MligTC455_28756	33722	702.55	Mlig455_041173	Neo: - Age: Up-Down-Up Region-enriched R8: 1.344/0.02990		0.952	-	-	-	-	0.952	-	Mlig455_041173 {REF} {Length: 15531} {Pfam: Integrase core domain [PF00665.28, score=41.2]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=5e-13]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
17.	MligTC455_24261	90	1.87	Mlig455_022408	Neo: - Age: logFC(26M/2M)=-0.488		0.951	-	-	-	-	0.951	-	Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683}

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