TomoSeq data search

Data search

Results for MligTC455_24503

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24503

16264

338.83

Mlig455_038666

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.314

RPL28

Mlig455_038666 {REF} {Length: 599} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=99.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=129, Expect=3e-39]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=130, Expect=1e-39]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=101, Expect=2e-28]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [RH, Score=74.3, Expect=4e-18]} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1310_59235, RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040, RNA815_27597}

Cumulative graph for MligTC455_24503

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.558	8.494	0.17776	0.80566
RegionR2	-0.425	8.494	0.21574	0.58214
RegionR3	0.35	8.494	0.23221	0.77434
RegionR4	0.412	8.494	0.19981	0.47909
RegionR5	0.41	8.494	0.14840	0.40006
RegionR6	0.065	8.494	0.82622	1.00000
RegionR7	0.161	8.494	0.58045	1.00000
RegionR8	-0.414	8.494	0.20861	0.80968

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.25	8.494	0.61721	1.00000
RegenerationR2	-0.343	8.494	0.37089	0.79653
RegenerationR3	-0.471	8.494	0.22239	0.65802
RegenerationR4	-0.351	8.494	0.37408	0.79690
RegenerationR5	-0.13	8.494	0.73687	0.96705
RegenerationR6	-0.226	8.494	0.55772	0.84388
RegenerationBL	0.024	8.494	0.94196	1.00000
RegenerationTP	0.32	8.494	0.36687	0.80528

Genes with expression patterns similar to MligTC455_24503

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24503	16264	338.83	Mlig455_038666	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.314	RPL28	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038666 {REF} {Length: 599} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=99.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=129, Expect=3e-39]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=130, Expect=1e-39]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=101, Expect=2e-28]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [RH, Score=74.3, Expect=4e-18]} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1310_59235, RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040, RNA815_27597}
2.	MligTC455_24502	16230	338.12	Mlig455_019151	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=1.555		5.964	1.000	1.000	0.972	0.999	0.999	0.994	Mlig455_019151 {REF} {Length: 618} {NoTransDecoderORF} {RNA1509_23040} {RNA1310_59235} {RNA815_27597}
3.	MligTC455_26043	46265	963.85	Mlig455_000395, Mlig455_001750, Mlig455_001772	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.297	RPL26, TMPRSS13	3.478	0.762	0.864	-	0.958	-	0.894	Mlig455_000395 {REF} {Length: 1017} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=20.3]} {Human: ENSG00000137747, TMPRSS13, transmembrane serine protease 13, [Score=52.0, Expect=5e-07]} {Celegans: WBGene00013126, mltn-2, MLt-TeN (Mlt-10) related, [Score=69.7, Expect=3e-13]} {RNA1310_66736} Mlig455_001750 {REF} {Length: 623} {TRANSSPLICED} {Pfam: Ribosomal proteins L26 eukaryotic, L24P archaeal [PF16906.7, score=129.1]; KOW motif [PF00467.31, score=28.3]} {Human: ENSG00000161970, RPL26, ribosomal protein L26, [RH, Score=217, Expect=2e-73]; ENSG00000037241, RPL26L1, ribosomal protein L26 like 1, [RH, Score=216, Expect=8e-73]} {Mouse: ENSMUSG00000060938, Rpl26, ribosomal protein L26, [RH, Score=217, Expect=1e-73]} {Dmel: FBgn0036825, RpL26, Ribosomal protein L26, [RH, Score=201, Expect=4e-67]} {Celegans: WBGene00004440, rpl-26, 60S ribosomal protein L26, [RH, Score=176, Expect=2e-57]} {Smed: dd_Smed_v6_235_0_1, dd_Smed_v6_235_0_1, [RH, Score=183, Expect=1e-60]} {RNA1509_10850, RNA1509_160} {RNA1310_56776, RNA1509_10850, RNA1509_160} {RNA1509_10850, RNA1509_160, RNA815_25698} Mlig455_001772 {REF} {Length: 622} {TRANSSPLICED} {Pfam: Ribosomal proteins L26 eukaryotic, L24P archaeal [PF16906.7, score=129.1]; KOW motif [PF00467.31, score=28.3]} {Human: ENSG00000161970, RPL26, ribosomal protein L26, [RH, Score=217, Expect=2e-73]; ENSG00000037241, RPL26L1, ribosomal protein L26 like 1, [RH, Score=216, Expect=8e-73]} {Mouse: ENSMUSG00000060938, Rpl26, ribosomal protein L26, [RH, Score=217, Expect=1e-73]} {Dmel: FBgn0036825, RpL26, Ribosomal protein L26, [RH, Score=201, Expect=4e-67]} {Celegans: WBGene00004440, rpl-26, 60S ribosomal protein L26, [RH, Score=176, Expect=2e-57]} {Smed: dd_Smed_v6_235_0_1, dd_Smed_v6_235_0_1, [RH, Score=183, Expect=1e-60]} {RNA1509_10850} {RNA1310_56776} {RNA815_25698}
4.	MligTC455_15909	17086	355.96	Mlig455_046415	Neo: - Age: logFC(26M/2M)=9.682	RPS17	3.47	-	0.815	-	0.961	0.859	0.835	Mlig455_046415 {REF} {Length: 586} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662} {RNA1310_57463, RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662} {RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662, RNA815_12035.3}
5.	MligTC455_15908	17739	369.57	Mlig455_046390	Neo: Int S/G2/M Age: Down-Up-Up	RPS17	3.435	-	0.841	-	0.955	0.849	0.790	Mlig455_046390 {REF} {Length: 591} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1542} {RNA1310_57463} {RNA815_12035.3}
6.	MligTC455_33322	22301	464.6	Mlig455_058828	Neo: Int S/G2/M Age: logFC(26M/2M)=0.265	RPS15A	2.62	-	0.783	-	-	0.968	0.869	Mlig455_058828 {REF} {Length: 586} {TRANSSPLICED} {Pfam: Ribosomal protein S8 [PF00410.21, score=72.9]} {Human: ENSG00000134419, RPS15A, ribosomal protein S15a, [RH, Score=208, Expect=2e-70]} {Mouse: ENSMUSG00000008683, Rps15a, ribosomal protein S15A, [RH, Score=208, Expect=2e-70]} {Dmel: FBgn0010198, RpS15Aa, Ribosomal protein S15Aa, [RH, Score=207, Expect=3e-70]} {Celegans: WBGene00004491, rps-22, Ribosomal Protein, Small subunit, [RH, Score=206, Expect=5e-70]} {Smed: dd_Smed_v6_237_0_1, dd_Smed_v6_237_0_1, [RH, Score=208, Expect=1e-70]} {RNA1509_2774, RNA1509_983} {RNA1310_52640.1, RNA1509_2774, RNA1509_983} {RNA1509_2774, RNA1509_983, RNA815_31214}
7.	MligTC455_29591	20922	435.88	Mlig455_034801	Neo: Int S/G2/M Age: -	RPL34	2.46	-	0.731	-	0.954	-	0.775	Mlig455_034801 {REF} {Length: 504} {TRANSSPLICED} {Pfam: Ribosomal protein L34e [PF01199.20, score=134.7]} {Human: ENSG00000109475, RPL34, ribosomal protein L34, [RH, Score=124, Expect=8e-38]} {Mouse: ENSMUSG00000062006, Rpl34, ribosomal protein L34, [RH, Score=125, Expect=4e-38]} {Dmel: FBgn0039406, RpL34a, Ribosomal protein L34a, [RH, Score=152, Expect=2e-48]} {Celegans: WBGene00004448, rpl-34, Ribosomal Protein, Large subunit, [RH, Score=118, Expect=7e-36]} {Smed: dd_Smed_v6_110_0_1, dd_Smed_v6_110_0_1, [RH, Score=151, Expect=4e-49]} {RNA1509_418} {RNA1310_70667, RNA1509_418} {RNA1509_418, RNA815_30525}
8.	MligTC455_28988	26527	552.65	Mlig455_025218	Neo: - Age: Up-Up-Up, logFC(26M/2M)=5.957		0.971	-	-	-	-	0.971	-	Mlig455_025218 {REF} {Length: 333} {NoTransDecoderORF} {RNA1509_892} {RNA1310_53106.5} {RNA815_11555.1}
9.	MligTC455_23733	15378	320.37	Mlig455_015559	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.405	YWHAZ	0.968	-	-	-	-	-	0.968	Mlig455_015559 {REF} {Length: 2250} {Pfam: 14-3-3 protein [PF00244.22, score=347.7]} {Human: ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [RH, Score=356, Expect=6e-125]; ENSG00000166913, YWHAB, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta, [RH, Score=355, Expect=7e-125]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=347, Expect=1e-121]; ENSG00000170027, YWHAG, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma, [RH, Score=340, Expect=1e-118]} {Mouse: ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [RH, Score=355, Expect=7e-125]; ENSMUSG00000018326, Ywhab, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide, [RH, Score=353, Expect=3e-124]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=345, Expect=4e-121]; ENSMUSG00000051391, Ywhag, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide, [RH, Score=340, Expect=8e-119]} {Dmel: FBgn0004907, 14-3-3zeta, [RH, Score=360, Expect=7e-127]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [RH, Score=354, Expect=1e-124]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [RH, Score=366, Expect=3e-129]} {RNA1509_100} {RNA1310_4196.2} {RNA815_2682.1}
10.	MligTC455_29016	36522	760.88	Mlig455_005202	Neo: - Age: - Regeneration-enriched R1: 3.026 Regeneration-enriched TP: 2.300 Regeneration-enriched BL: 2.050		0.967	-	-	-	-	0.967	-	Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1}
11.	MligTC455_28759	22924	477.58	Mlig455_015450	Neo: - Age: Up-Down-Up Region-enriched R8: 1.325/0.01787 Regeneration-downregulated BL: -2.091 Regeneration-depleted BL: -2.091		0.964	-	-	-	-	0.964	-	Mlig455_015450 {REF} {Length: 337} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18729} {RNA1310_68532} {RNA815_18679}
12.	MligTC455_18049	3659	76.23	Mlig455_022507, Mlig455_055035	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_022507 {REF} {Length: 1498} {Pfam: PLAC8 family [PF04749.19, score=73.4]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1310_55602, RNA1509_17309, RNA1509_44969, RNA1509_59075} {RNA1509_17309, RNA1509_44969, RNA1509_59075, RNA815_30798} Mlig455_055035 {REF} {Length: 943} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}
13.	MligTC455_40443	60	1.24	Mlig455_044276	Neo: - Age: - Region-enriched R2: 6.055/0.00218 Regeneration-upregulated R4: 4.734 Regeneration-enriched R4: 4.734		0.96	-	-	-	-	0.960	-	Mlig455_044276 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=48.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=19.8]} {RNA1509_25529} {RNA1310_40493.1, RNA1509_25529} {RNA1509_25529, RNA815_17750.1}
14.	MligTC455_36384	2472	51.51	Mlig455_008688	Neo: Neoblast Age: Down-Up-Up		0.957	-	-	-	0.957	-	-	Mlig455_008688 {REF} {Length: 373} {TRANSSPLICED} {RNA1509_4059} {RNA1310_90770, RNA1509_4059} {RNA1509_4059, RNA815_48352}
15.	MligTC455_32715	7927	165.14	Mlig455_048846	Neo: Int S/G2/M Age: -		0.953	-	-	-	-	0.953	-	Mlig455_048846 {REF} {Length: 542} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_795} {RNA1310_52206.1, RNA1509_795} {RNA1509_795, RNA815_26551.1}
16.	MligTC455_46861	3718	77.45	Mlig455_003353	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	0.953	-	Mlig455_003353 {REF} {Length: 366} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7676} {RNA1310_5750.1} {RNA815_2172.1}
17.	MligTC455_28982	15213	316.93	Mlig455_025642	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.852		0.952	-	-	-	-	0.952	-	Mlig455_025642 {REF} {Length: 195} {NoTransDecoderORF} {RNA1509_892} {RNA1310_53106.5} {RNA815_11555.1}
18.	MligTC455_15849	863	17.97	Mlig455_057363, Mlig455_057368, Mlig455_059567	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_057363 {REF} {Length: 1048} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008} Mlig455_057368 {REF} {Length: 1049} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267, RNA1509_56468} {RNA1509_56468, RNA815_15008} Mlig455_059567 {REF} {Length: 2018} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008}

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