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Results for MligTC455_40474

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40474 603 12.56 Mlig455_002962

Neo: -

Age: -

 MITF Mlig455_002962 {REF} {Length: 3275} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=51.2]; MITF/TFEB/TFEC/TFE3 N-terminus [PF15951.7, score=21.1]} {Human: ENSG00000187098, MITF, melanogenesis associated transcription factor, [RH, Score=102, Expect=8e-23]; ENSG00000068323, TFE3, transcription factor binding to IGHM enhancer 3, [RH, Score=97.8, Expect=4e-21]} {Mouse: ENSMUSG00000035158, Mitf, melanogenesis associated transcription factor, [RH, Score=102, Expect=9e-23]; ENSMUSG00000000134, Tfe3, transcription factor E3, [RH, Score=97.8, Expect=3e-21]} {Dmel: FBgn0263112, Mitf, [RH, Score=87.0, Expect=8e-18]} {Celegans: WBGene00020930, hlh-30, Helix Loop Helix, [Score=77.4, Expect=4e-15]} {Smed: dd_Smed_v6_7316_0_1, dd_Smed_v6_7316_0_1, [Score=87.4, Expect=3e-18]} {RNA1509_15752, RNA1509_39954} {RNA1310_5993.2, RNA1509_15752, RNA1509_39954} {RNA1509_15752, RNA1509_39954, RNA815_13345}

Cumulative graph for MligTC455_40474

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.018 3.901 0.98605 1.00000
RegionR2 -0.451 3.901 0.42147 0.81249
RegionR3 -0.052 3.901 0.91331 1.00000
RegionR4 0.266 3.901 0.61975 0.93002
RegionR5 0.462 3.901 0.28927 0.62028
RegionR6 0.484 3.901 0.29167 0.88322
RegionR7 -0.703 3.901 0.25693 0.88390
RegionR8 0.013 3.901 0.98514 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.469 3.901 0.36586 1.00000
RegenerationR2 0.234 3.901 0.66381 0.94305
RegenerationR3 0.367 3.901 0.51391 0.86405
RegenerationR4 0.197 3.901 0.73569 0.96622
RegenerationR5 0.291 3.901 0.58382 0.90217
RegenerationR6 0.067 3.901 0.90807 1.00000
RegenerationBL -0.178 3.901 0.77340 1.00000
RegenerationTP 0.009 3.901 0.98887 1.00000


Genes with expression patterns similar to MligTC455_40474

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40474 603 12.56 Mlig455_002962

Neo: -

Age: -

 MITF 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002962 {REF} {Length: 3275} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=51.2]; MITF/TFEB/TFEC/TFE3 N-terminus [PF15951.7, score=21.1]} {Human: ENSG00000187098, MITF, melanogenesis associated transcription factor, [RH, Score=102, Expect=8e-23]; ENSG00000068323, TFE3, transcription factor binding to IGHM enhancer 3, [RH, Score=97.8, Expect=4e-21]} {Mouse: ENSMUSG00000035158, Mitf, melanogenesis associated transcription factor, [RH, Score=102, Expect=9e-23]; ENSMUSG00000000134, Tfe3, transcription factor E3, [RH, Score=97.8, Expect=3e-21]} {Dmel: FBgn0263112, Mitf, [RH, Score=87.0, Expect=8e-18]} {Celegans: WBGene00020930, hlh-30, Helix Loop Helix, [Score=77.4, Expect=4e-15]} {Smed: dd_Smed_v6_7316_0_1, dd_Smed_v6_7316_0_1, [Score=87.4, Expect=3e-18]} {RNA1509_15752, RNA1509_39954} {RNA1310_5993.2, RNA1509_15752, RNA1509_39954} {RNA1509_15752, RNA1509_39954, RNA815_13345}
2. MligTC455_25248 1332 27.75 Mlig455_008436

Neo: -

Age: logFC(26M/2M)=-0.215

 0.987 - - - 0.987 - - Mlig455_008436 {REF} {Length: 6765} {Pfam: LicD family [PF04991.15, score=61.5]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_9951_0_1, dd_Smed_v6_9951_0_1, [Score=177, Expect=1e-53]} {RNA1509_13435, RNA1509_24800, RNA1509_27773, RNA1509_36968, RNA1509_39946} {RNA1310_20564.1, RNA1509_13435, RNA1509_24800, RNA1509_27773, RNA1509_36968, RNA1509_39946} {RNA1509_13435, RNA1509_24800, RNA1509_27773, RNA1509_36968, RNA1509_39946, RNA815_8075}
3. MligTC455_30827 909 18.94 Mlig455_053494, Mlig455_053499

Neo: -

Age: Down-Up-Down

 RAB8A 0.962 - - - 0.962 - -

Mlig455_053494 {REF} {Length: 2941} {Pfam: Ras family [PF00071.24, score=213.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.9]; ADP-ribosylation factor family [PF00025.23, score=60.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=28.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [RH, Score=303, Expect=2e-105]; ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=5e-104]} {Mouse: ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [RH, Score=302, Expect=2e-105]; ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=2e-104]} {Dmel: FBgn0262518, Rab8, [RH, Score=281, Expect=5e-97]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [RH, Score=271, Expect=2e-93]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [RH, Score=281, Expect=4e-97]} {RNA1509_3060} {RNA1310_14174} {RNA815_3345.1}

Mlig455_053499 {REF} {Length: 2980} {Pfam: Ras family [PF00071.24, score=213.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.9]; ADP-ribosylation factor family [PF00025.23, score=60.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=28.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [RH, Score=303, Expect=2e-105]; ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=5e-104]} {Mouse: ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [RH, Score=302, Expect=2e-105]; ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [RH, Score=300, Expect=2e-104]} {Dmel: FBgn0262518, Rab8, [RH, Score=281, Expect=5e-97]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [RH, Score=271, Expect=2e-93]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [RH, Score=281, Expect=4e-97]} {RNA1509_3060} {RNA1310_14174} {RNA815_3345.1}
4. MligTC455_20855 907 18.9 Mlig455_007646

Neo: -

Age: logFC(26M/2M)=-0.343

Region-enriched R4: 1.618/0.00245
Region-enriched R3: 1.595/0.00006

 CNNM2 0.953 - - - 0.953 - - Mlig455_007646 {REF} {Length: 4596} {TRANSSPLICED} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=107.2]; CBS domain [PF00571.30, score=28.6]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=385, Expect=2e-120]; ENSG00000158158, CNNM4, cyclin and CBS domain divalent metal cation transport mediator 4, [Score=371, Expect=6e-116]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=385, Expect=1e-120]; ENSMUSG00000037408, Cnnm4, cyclin M4, [Score=378, Expect=9e-119]} {Dmel: FBgn0262124, uex, unextended, [Score=372, Expect=4e-116]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=288, Expect=4e-85]} {Smed: dd_Smed_v6_6903_0_1, dd_Smed_v6_6903_0_1, [Score=417, Expect=2e-133]} {RNA1509_2924, RNA1509_33661} {RNA1310_8202, RNA1509_33661} {RNA1509_33661, RNA815_3747}

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