TomoSeq data search

Data search

Results for MligTC455_40631

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40631

38

0.80

Mlig455_033576

Neo: -

Age: -

Mlig455_033576 {REF} {Length: 1964} {RNA1509_57122} {RNA1310_32260} {RNA815_19996}

Cumulative graph for MligTC455_40631

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.263	1.025	1.00000	1.00000
RegionR2	4.142	1.025	0.06742	0.31537
RegionR3	0.505	1.025	0.58321	1.00000
RegionR4	-4.118	1.025	1.00000	1.00000
RegionR5	-1.305	1.025	0.95945	1.00000
RegionR6	-2.895	1.025	0.99992	1.00000
RegionR7	1.946	1.025	0.28878	0.92252
RegionR8	4.987	1.025	0.00910	0.17823

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.24	1.025	1.00000	1.00000
RegenerationR2	1.153	1.025	0.50970	0.87502
RegenerationR3	1.697	1.025	0.35704	0.77391
RegenerationR4	4.128	1.025	0.07020	0.42120
RegenerationR5	2.849	1.025	0.11971	0.51860
RegenerationR6	2.489	1.025	0.33624	0.68258
RegenerationBL	-2.281	1.025	1.00000	1.00000
RegenerationTP	0.375	1.025	0.77055	1.00000

Genes with expression patterns similar to MligTC455_40631

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40631	38	0.8	Mlig455_033576	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_033576 {REF} {Length: 1964} {RNA1509_57122} {RNA1310_32260} {RNA815_19996}
2.	MligTC455_21763	173	3.61	Mlig455_048540, Mlig455_053321	Neo: - Age: - Region-enriched R4: 5.363/0.02880		0.977	-	-	-	-	-	0.977	Mlig455_048540 {REF} {Length: 1277} {NoTransDecoderORF} {RNA1509_52731} {RNA1310_42960} {RNA815_343.1} Mlig455_053321 {REF} {Length: 1356} {NoTransDecoderORF} {RNA1509_52731} {RNA1310_42960} {RNA815_343.1}
3.	MligTC455_33849	62	1.29	Mlig455_006861	Neo: - Age: -	GRIK5	0.974	-	-	-	-	-	0.974	Mlig455_006861 {REF} {Length: 2491} {Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=25.5]} {Human: ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=78.2, Expect=8e-16]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=77.8, Expect=1e-15]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=78.6, Expect=5e-16]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=78.6, Expect=5e-16]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=82.8, Expect=1e-17]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=143, Expect=1e-38]} {RNA1310_42312} {RNA815_56269}
4.	MligTC455_51646	21	0.44	Mlig455_015639, Mlig455_066292	Neo: - Age: Up-Down-Down Region-enriched R2: 9.972/0.00174	NYNRIN	0.974	-	-	-	-	0.974	-	Mlig455_015639 {REF} {Length: 2303} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=41.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=81.6, Expect=2e-19]} {RNA1310_4200} {RNA815_22448} Mlig455_066292 {REF} {Length: 2895} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.9]; Integrase zinc binding domain [PF17921.3, score=71.7]; Integrase core domain [PF00665.28, score=51.4]; Integrase core domain [PF13683.8, score=28.4]; H2C2 zinc finger [PF09337.12, score=22.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=62.8, Expect=1e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=139, Expect=3e-34]} {RNA1310_4200} {RNA815_22448}
5.	MligTC455_19759	18	0.39	Mlig455_002694, Mlig455_002710	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458} Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
6.	MligTC455_06794	27	0.56	Mlig455_053654	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_053654 {REF} {Length: 543} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=26.6]; Protein of unknown function (DUF445) [PF04286.14, score=26.0]}
7.	MligTC455_07838	46	0.96	Mlig455_050475	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_050475 {REF} {Length: 598} {NoTransDecoderORF}
8.	MligTC455_29910	12	0.26	Mlig455_006440, Mlig455_053231	Neo: - Age: -	JAK1, NPFFR2	0.96	-	-	-	-	-	0.960	Mlig455_006440 {REF} {Length: 852} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=55.3]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=68.6, Expect=8e-13]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=55.1, Expect=2e-08]; ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0033058, CCHa2-R, CCHamide-2 receptor, [Score=52.4, Expect=1e-07]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=55.1, Expect=1e-08]} {Smed: dd_Smed_v6_22952_0_1, dd_Smed_v6_22952_0_1, [Score=61.6, Expect=7e-11]} {RNA1310_140717} Mlig455_053231 {REF} {Length: 3161} {Pfam: Protein kinase domain [PF00069.27, score=125.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.4]; Phosphotransferase enzyme family [PF01636.25, score=20.8]} {Human: ENSG00000162434, JAK1, Janus kinase 1, [Score=67.0, Expect=5e-11]; ENSG00000105639, JAK3, Janus kinase 3, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000031805, Jak3, Janus kinase 3, [Score=63.5, Expect=4e-10]; ENSMUSG00000028530, Jak1, Janus kinase 1, [Score=63.2, Expect=6e-10]; ENSMUSG00000024789, Jak2, Janus kinase 2, [Score=63.2, Expect=6e-10]} {Dmel: FBgn0000826, png, pan gu, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_7897_0_1, dd_Smed_v6_7897_0_1, [Score=64.3, Expect=7e-11]} {RNA1509_28827} {RNA1310_14923} {RNA815_5031}
9.	MligTC455_13565	32	0.67	Mlig455_010042	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_010042 {REF} {Length: 586} {NoTransDecoderORF} {RNA1310_28599}
10.	MligTC455_32536	335	6.98	Mlig455_000020, Mlig455_003983, Mlig455_010913, Mlig455_016554, Mlig455_043485	Neo: - Age: Up-Down-Down Region-specific R4: 5.073 Region-enriched R4: 2.588/0.00024		0.958	-	-	-	-	0.958	-	Mlig455_000020 {REF} {Length: 630} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} Mlig455_003983 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} Mlig455_010913 {REF} {Length: 630} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} Mlig455_016554 {REF} {Length: 697} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} Mlig455_043485 {REF} {Length: 1359} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1}
11.	MligTC455_57410	5	0.11	Mlig455_042175	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_042175 {REF} {Length: 230} {NoTransDecoderORF}
12.	MligTC455_41442	18	0.37	Mlig455_033938	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_033938 {REF} {Length: 868} {NoTransDecoderORF} {RNA1310_101607}
13.	MligTC455_06845	32	0.67	Mlig455_060389	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_060389 {REF} {Length: 566} {NoTransDecoderORF}
14.	MligTC455_13093	24	0.49	Mlig455_005512	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_005512 {REF} {Length: 3435} {RNA1509_41201} {RNA1310_40743} {RNA815_51130}
15.	MligTC455_49512	1417	29.51	Mlig455_001321, Mlig455_070574	Neo: - Age: logFC(26M/2M)=-0.350		0.951	-	-	-	-	0.951	-	Mlig455_001321 {REF} {Length: 2616} {TRANSSPLICED} {RNA1509_8645} {RNA1310_12470} {RNA815_9297.1} Mlig455_070574 {REF} {Length: 2257} {TRANSSPLICED} {RNA1509_8645} {RNA1310_12470} {RNA815_9297.1}
16.	MligTC455_00918	9	0.19	Mlig455_058006	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_058006 {REF} {Length: 671}
17.	MligTC455_37441	157	3.28	Mlig455_055697	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_055697 {REF} {Length: 2393} {RNA1509_10526} {RNA1310_31711} {RNA815_17406}

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