TomoSeq data search

Data search

Results for MligTC455_40674

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40674	126	2.62	Mlig455_018605	Neo: - Age: Down-Up-Down	MYF6	Mlig455_018605 {REF} {Length: 2127} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.0]; Myogenic Basic domain [PF01586.18, score=42.2]} {Human: ENSG00000111046, MYF6, myogenic factor 6, [RH, Score=137, Expect=6e-37]; ENSG00000129152, MYOD1, myogenic differentiation 1, [RH, Score=137, Expect=7e-36]; ENSG00000111049, MYF5, myogenic factor 5, [RH, Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000009471, Myod1, myogenic differentiation 1, [RH, Score=141, Expect=1e-37]; ENSMUSG00000035923, Myf6, myogenic factor 6, [RH, Score=139, Expect=1e-37]; ENSMUSG00000000435, Myf5, myogenic factor 5, [RH, Score=137, Expect=6e-37]} {Dmel: FBgn0002922, nau, nautilus, [RH, Score=147, Expect=7e-40]} {Celegans: WBGene00001948, hlh-1, Myoblast determination protein 1 homolog, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_12634_0_1, dd_Smed_v6_12634_0_1, [RH, Score=176, Expect=2e-49]} {RNA1509_27557} {RNA1310_18497.1, RNA1509_27557} {RNA1509_27557, RNA815_10240}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40674

126

2.62

Mlig455_018605

Neo: -

Age: Down-Up-Down

MYF6

Mlig455_018605 {REF} {Length: 2127} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.0]; Myogenic Basic domain [PF01586.18, score=42.2]} {Human: ENSG00000111046, MYF6, myogenic factor 6, [RH, Score=137, Expect=6e-37]; ENSG00000129152, MYOD1, myogenic differentiation 1, [RH, Score=137, Expect=7e-36]; ENSG00000111049, MYF5, myogenic factor 5, [RH, Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000009471, Myod1, myogenic differentiation 1, [RH, Score=141, Expect=1e-37]; ENSMUSG00000035923, Myf6, myogenic factor 6, [RH, Score=139, Expect=1e-37]; ENSMUSG00000000435, Myf5, myogenic factor 5, [RH, Score=137, Expect=6e-37]} {Dmel: FBgn0002922, nau, nautilus, [RH, Score=147, Expect=7e-40]} {Celegans: WBGene00001948, hlh-1, Myoblast determination protein 1 homolog, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_12634_0_1, dd_Smed_v6_12634_0_1, [RH, Score=176, Expect=2e-49]} {RNA1509_27557} {RNA1310_18497.1, RNA1509_27557} {RNA1509_27557, RNA815_10240}

Cumulative graph for MligTC455_40674

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.57	2.188	0.36569	1.00000
RegionR2	1.577	2.188	0.18906	0.54397
RegionR3	0.074	2.188	0.83852	1.00000
RegionR4	0.906	2.188	0.46936	0.79743
RegionR5	-0.241	2.188	0.92471	1.00000
RegionR6	0.792	2.188	0.49140	1.00000
RegionR7	0.635	2.188	0.63593	1.00000
RegionR8	0.828	2.188	0.61755	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.21	2.188	0.31279	1.00000
RegenerationR2	-0.169	2.188	0.82178	0.99544
RegenerationR3	0.655	2.188	0.52520	0.86956
RegenerationR4	0.152	2.188	0.88134	1.00000
RegenerationR5	1.405	2.188	0.16072	0.58415
RegenerationR6	0.902	2.188	0.33664	0.68298
RegenerationBL	-5.407	2.188	0.02482	0.17336
RegenerationTP	-0.542	2.188	0.69360	1.00000

Genes with expression patterns similar to MligTC455_40674

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40674	126	2.62	Mlig455_018605	Neo: - Age: Down-Up-Down	MYF6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018605 {REF} {Length: 2127} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.0]; Myogenic Basic domain [PF01586.18, score=42.2]} {Human: ENSG00000111046, MYF6, myogenic factor 6, [RH, Score=137, Expect=6e-37]; ENSG00000129152, MYOD1, myogenic differentiation 1, [RH, Score=137, Expect=7e-36]; ENSG00000111049, MYF5, myogenic factor 5, [RH, Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000009471, Myod1, myogenic differentiation 1, [RH, Score=141, Expect=1e-37]; ENSMUSG00000035923, Myf6, myogenic factor 6, [RH, Score=139, Expect=1e-37]; ENSMUSG00000000435, Myf5, myogenic factor 5, [RH, Score=137, Expect=6e-37]} {Dmel: FBgn0002922, nau, nautilus, [RH, Score=147, Expect=7e-40]} {Celegans: WBGene00001948, hlh-1, Myoblast determination protein 1 homolog, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_12634_0_1, dd_Smed_v6_12634_0_1, [RH, Score=176, Expect=2e-49]} {RNA1509_27557} {RNA1310_18497.1, RNA1509_27557} {RNA1509_27557, RNA815_10240}
2.	MligTC455_18121	162	3.37	Mlig455_036761	Neo: - Age: -		0.959	-	-	0.959	-	-	-	Mlig455_036761 {REF} {Length: 927} {NoTransDecoderORF} {RNA1310_100909}
3.	MligTC455_32654	93	1.93	Mlig455_038742	Neo: - Age: Down-Up-Up Region-enriched R5: 3.441/0.00267		0.957	-	-	-	0.957	-	-	Mlig455_038742 {REF} {Length: 2381} {TRANSSPLICED} {RNA1509_55323} {RNA1310_9315.1} {RNA815_3200.1}
4.	MligTC455_31948	70	1.45	Mlig455_007378, Mlig455_013863, Mlig455_017814, Mlig455_029704	Neo: - Age: -	KCTD1	0.955	-	-	-	-	-	0.955	Mlig455_007378 {REF} {Length: 1142} {TRANSSPLICED} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=69.3, Expect=4e-12]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=69.3, Expect=2e-12]} {RNA1310_16403.1} {RNA815_36960} Mlig455_013863 {REF} {Length: 108} {NoTransDecoderORF} {RNA1509_35604} {RNA1310_61034} {RNA815_12032.1} Mlig455_017814 {REF} {Length: 2652} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=72.0, Expect=8e-13]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=72.4, Expect=5e-13]} {RNA1509_35604} {RNA1310_16403.1} {RNA815_36960} Mlig455_029704 {REF} {Length: 726} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=50.8, Expect=9e-07]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=50.8, Expect=7e-07]} {RNA1310_16403.1} {RNA815_43647}
5.	MligTC455_18029	459	9.55	Mlig455_006976	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_006976 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_56472} {RNA815_14182.2}