Data search
Results for MligTC455_18029
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18029 | 459 | 9.55 | Mlig455_006976 | Neo: - Age: - |
Mlig455_006976 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_56472} {RNA815_14182.2} |
Cumulative graph for MligTC455_18029
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.825 | 3.447 | 0.37010 | 1.00000 | |
| RegionR2 | -0.373 | 3.447 | 0.48484 | 0.86792 | |
| RegionR3 | 0.073 | 3.447 | 0.86865 | 1.00000 | |
| RegionR4 | -0.172 | 3.447 | 0.72576 | 1.00000 | |
| RegionR5 | -0.186 | 3.447 | 0.66675 | 1.00000 | |
| RegionR6 | 0.144 | 3.447 | 0.75188 | 1.00000 | |
| RegionR7 | -0.055 | 3.447 | 0.92379 | 1.00000 | |
| RegionR8 | -0.256 | 3.447 | 0.72506 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.332 | 3.447 | 0.01104 | 0.46010 | |
| RegenerationR2 | -0.265 | 3.447 | 0.60781 | 0.91888 | |
| RegenerationR3 | -0.36 | 3.447 | 0.49622 | 0.85641 | |
| RegenerationR4 | -0.366 | 3.447 | 0.49483 | 0.86706 | |
| RegenerationR5 | -1.205 | 3.447 | 0.02740 | 0.28053 | |
| RegenerationR6 | -0.737 | 3.447 | 0.18308 | 0.51885 | |
| RegenerationBL | -1.512 | 3.447 | 0.03458 | 0.20918 | |
| RegenerationTP | 0.352 | 3.447 | 0.58006 | 0.94983 |
Genes with expression patterns similar to MligTC455_18029
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18029 | 459 | 9.55 | Mlig455_006976 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006976 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_56472} {RNA815_14182.2} | |
| 2. | MligTC455_26970 | 248 | 5.16 | Mlig455_011260, Mlig455_011348 | Neo: - Age: Up-Down-Down |
SACS | 1.8 | - | - | - | 0.846 | - | 0.954 | Mlig455_011260 {REF} {Length: 7112} {Pfam: HEPN domain [PF05168.16, score=43.5]} {Human: ENSG00000151835, SACS, sacsin molecular chaperone, [Score=283, Expect=9e-76]} {Mouse: ENSMUSG00000048279, Sacs, sacsin, [Score=285, Expect=2e-76]} {RNA1509_41697, RNA1509_54949} {RNA1310_9970.1, RNA1509_54949} {RNA1509_54949, RNA815_63.1} Mlig455_011348 {REF} {Length: 401} {Pfam: HEPN domain [PF05168.16, score=43.4]} {RNA1509_14434} {RNA1310_5259.1} {RNA815_707} |
| 3. | MligTC455_34643 | 898 | 18.71 | Mlig455_063315 | Neo: - Age: logFC(26M/2M)=0.323 |
ATP2A2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_063315 {REF} {Length: 4728} {Pfam: E1-E2 ATPase [PF00122.22, score=188.3]; Cation transporting ATPase, C-terminus [PF00689.23, score=148.3]; Cation transport ATPase (P-type) [PF13246.8, score=75.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=73.6]; Cation transporter/ATPase, N-terminus [PF00690.28, score=68.7]; haloacid dehalogenase-like hydrolase [PF12710.9, score=30.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=30.1]} {Human: ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1449, Expect=0.0]; ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1440, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1398, Expect=0.0]} {Mouse: ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1454, Expect=0.0]; ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1442, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1395, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1480, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1474, Expect=0.0]} {Smed: dd_Smed_v6_1772_0_1, dd_Smed_v6_1772_0_1, [RH, Score=1607, Expect=0.0]} {RNA1509_21355} {RNA1310_2402} {RNA815_2104.1} |
| 4. | MligTC455_50702 | 143 | 2.98 | Mlig455_019178 | Neo: - Age: - Region-enriched R5: 1.991/0.01349 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_019178 {REF} {Length: 2180} {TRANSSPLICED} {RNA1310_35794.1} {RNA815_23814} | |
| 5. | MligTC455_17047 | 353 | 7.36 | Mlig455_008112 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.966/0.03620 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_008112 {REF} {Length: 1341} {RNA1509_23731} {RNA1310_20367.2} {RNA815_10999} | |
| 6. | MligTC455_40674 | 126 | 2.62 | Mlig455_018605 | Neo: - Age: Down-Up-Down |
MYF6 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_018605 {REF} {Length: 2127} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.0]; Myogenic Basic domain [PF01586.18, score=42.2]} {Human: ENSG00000111046, MYF6, myogenic factor 6, [RH, Score=137, Expect=6e-37]; ENSG00000129152, MYOD1, myogenic differentiation 1, [RH, Score=137, Expect=7e-36]; ENSG00000111049, MYF5, myogenic factor 5, [RH, Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000009471, Myod1, myogenic differentiation 1, [RH, Score=141, Expect=1e-37]; ENSMUSG00000035923, Myf6, myogenic factor 6, [RH, Score=139, Expect=1e-37]; ENSMUSG00000000435, Myf5, myogenic factor 5, [RH, Score=137, Expect=6e-37]} {Dmel: FBgn0002922, nau, nautilus, [RH, Score=147, Expect=7e-40]} {Celegans: WBGene00001948, hlh-1, Myoblast determination protein 1 homolog, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_12634_0_1, dd_Smed_v6_12634_0_1, [RH, Score=176, Expect=2e-49]} {RNA1509_27557} {RNA1310_18497.1, RNA1509_27557} {RNA1509_27557, RNA815_10240} |
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