TomoSeq data search

Data search

Results for MligTC455_40712

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40712	18	0.37	Mlig455_027658	Neo: - Age: -	KCNMA1	Mlig455_027658 {REF} {Length: 5932} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.4]; Ion transport protein [PF00520.33, score=61.9]; Ion channel [PF07885.18, score=48.2]; TrkA-N domain [PF02254.20, score=21.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1056, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1170, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_9989}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40712

0.37

Mlig455_027658

Neo: -

Age: -

KCNMA1

Mlig455_027658 {REF} {Length: 5932} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.4]; Ion transport protein [PF00520.33, score=61.9]; Ion channel [PF07885.18, score=48.2]; TrkA-N domain [PF02254.20, score=21.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1056, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1170, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_9989}

Cumulative graph for MligTC455_40712

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.248	0.603	0.99992	1.00000
RegionR2	-2.028	0.603	0.99975	1.00000
RegionR3	-0.549	0.603	0.99969	1.00000
RegionR4	1.286	0.603	0.99979	1.00000
RegionR5	-0.207	0.603	0.99994	1.00000
RegionR6	-1.148	0.603	0.99981	1.00000
RegionR7	-0.31	0.603	0.99997	1.00000
RegionR8	0.71	0.603	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.099	0.603	0.99994	1.00000
RegenerationR2	2.482	0.603	0.16279	0.59994
RegenerationR3	0.76	0.603	0.82821	0.99032
RegenerationR4	-0.552	0.603	0.90927	1.00000
RegenerationR5	-0.157	0.603	0.87859	1.00000
RegenerationR6	0.654	0.603	0.81910	0.98641
RegenerationBL	1.699	0.603	0.84543	1.00000
RegenerationTP	-1.432	0.603	0.99985	1.00000

Genes with expression patterns similar to MligTC455_40712

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40712	18	0.37	Mlig455_027658	Neo: - Age: -	KCNMA1	1	-	-	-	-	1.000	-	Mlig455_027658 {REF} {Length: 5932} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.4]; Ion transport protein [PF00520.33, score=61.9]; Ion channel [PF07885.18, score=48.2]; TrkA-N domain [PF02254.20, score=21.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1056, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1170, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_9989}
2.	MligTC455_37148	19	0.39	Mlig455_041873	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_041873 {REF} {Length: 1755} {TRANSSPLICED} {Pfam: Integrase core domain [PF00665.28, score=29.5]; Integrase core domain [PF13683.8, score=19.8]} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=67.0, Expect=2e-13]} {RNA1509_40904} {RNA1310_5667} {RNA815_1981.1}
3.	MligTC455_38350	86	1.78	Mlig455_039927	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_039927 {REF} {Length: 3262} {RNA1509_17147} {RNA1310_17243} {RNA815_34486}
4.	MligTC455_08957	8	0.18	Mlig455_051321	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_051321 {REF} {Length: 473} {NoTransDecoderORF} {RNA1310_104048}
5.	MligTC455_09998	21	0.43	Mlig455_035996	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_035996 {REF} {Length: 1046} {NoTransDecoderORF} {RNA1509_40529, RNA1509_45539} {RNA1310_37123, RNA1509_45539} {RNA1509_45539, RNA815_3505.1}
6.	MligTC455_26318	134	2.79	Mlig455_024957	Neo: Irradiation Age: -	DNAJB4	0.95	-	-	-	-	0.950	-	Mlig455_024957 {REF} {Length: 6556} {Pfam: DnaJ domain [PF00226.33, score=54.8]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=58.5, Expect=2e-09]; ENSG00000137094, DNAJB5, DnaJ heat shock protein family (Hsp40) member B5, [Score=58.5, Expect=2e-10]; ENSG00000132002, DNAJB1, DnaJ heat shock protein family (Hsp40) member B1, [Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=61.6, Expect=2e-10]} {Dmel: FBgn0002174, l(2)tid, lethal (2) tumorous imaginal discs, [Score=59.7, Expect=8e-10]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=57.0, Expect=3e-09]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=58.2, Expect=4e-10]} {RNA1509_49462} {RNA1310_5233, RNA1509_49462} {RNA1509_49462, RNA815_38818}