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Results for MligTC455_38350

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38350 86 1.78 Mlig455_039927

Neo: -

Age: -

 Mlig455_039927 {REF} {Length: 3262} {RNA1509_17147} {RNA1310_17243} {RNA815_34486}

Cumulative graph for MligTC455_38350

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.726 1.743 0.99967 1.00000
RegionR2 1.521 1.743 0.26266 0.64421
RegionR3 -0.104 1.743 0.80120 1.00000
RegionR4 1.129 1.743 0.37955 0.70385
RegionR5 -0.161 1.743 0.80959 1.00000
RegionR6 1.824 1.743 0.11352 0.61534
RegionR7 1.869 1.743 0.20990 0.82392
RegionR8 -3.352 1.743 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.668 1.743 0.99995 1.00000
RegenerationR2 -0.493 1.743 0.50513 0.87320
RegenerationR3 1.87 1.743 0.06087 0.41945
RegenerationR4 0.413 1.743 0.65941 0.93796
RegenerationR5 1.362 1.743 0.11908 0.51776
RegenerationR6 -0.225 1.743 0.79034 0.97262
RegenerationBL 2.467 1.743 0.08345 0.33823
RegenerationTP 1.804 1.743 0.40984 0.83697


Genes with expression patterns similar to MligTC455_38350

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38350 86 1.78 Mlig455_039927

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_039927 {REF} {Length: 3262} {RNA1509_17147} {RNA1310_17243} {RNA815_34486}
2. MligTC455_47732 129 2.68 Mlig455_025199, Mlig455_025658

Neo: -

Age: -

 RAC1 1.76 - - 0.794 - 0.966 -

Mlig455_025199 {REF} {Length: 1151} {Pfam: Ras family [PF00071.24, score=22.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]} {Dmel: FBgn0010333, Rac1, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=57.8, Expect=4e-11]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=66.2, Expect=2e-14]} {RNA1509_55963} {RNA1310_40048} {RNA815_24639}

Mlig455_025658 {REF} {Length: 1673} {Pfam: Ras family [PF00071.24, score=161.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=26.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=206, Expect=6e-68]; ENSG00000177105, RHOG, ras homolog family member G, [Score=201, Expect=7e-66]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=206, Expect=4e-68]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=201, Expect=5e-66]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=196, Expect=4e-64]} {Dmel: FBgn0010333, Rac1, [Score=202, Expect=1e-66]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=204, Expect=2e-67]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=205, Expect=9e-68]} {RNA1509_55963} {RNA1310_40048, RNA1509_55963} {RNA1509_55963, RNA815_24639}
3. MligTC455_28413 107 2.22 Mlig455_032935

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_032935 {REF} {Length: 3941} {RNA1509_15744} {RNA1310_6945.1} {RNA815_14623.1}
4. MligTC455_50428 189 3.94 Mlig455_063487

Neo: -

Age: -

 FLAD1 0.979 - - - 0.979 - - Mlig455_063487 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=109.4]; Phosphoadenosine phosphosulfate reductase family [PF01507.21, score=96.6]} {Human: ENSG00000160688, FLAD1, flavin adenine dinucleotide synthetase 1, [RH, Score=354, Expect=2e-115]} {Mouse: ENSMUSG00000042642, Flad1, flavin adenine dinucleotide synthetase 1, [RH, Score=369, Expect=5e-121]} {Dmel: FBgn0030431, CG4407, [RH, Score=163, Expect=2e-45]} {Celegans: WBGene00011271, flad-1, Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region, [RH, Score=315, Expect=2e-100]} {Smed: dd_Smed_v6_8204_0_2, dd_Smed_v6_8204_0_2, [RH, Score=357, Expect=5e-117]} {RNA1509_48770, RNA1509_52152, RNA1509_8816} {RNA1310_9199.1, RNA1509_48770, RNA1509_52152, RNA1509_8816} {RNA1509_48770, RNA1509_52152, RNA1509_8816, RNA815_5028}
5. MligTC455_50844 224 4.67 Mlig455_018511

Neo: -

Age: Down-Up-Up

Region-enriched R2: 4.591/0.00005

 SSUH2 0.959 - - - - - 0.959 Mlig455_018511 {REF} {Length: 1843} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=120, Expect=2e-29]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=95.5, Expect=3e-21]} {RNA1509_39980} {RNA1310_60742, RNA1509_39980} {RNA1509_39980, RNA815_28938}
6. MligTC455_39812 95 1.98 Mlig455_045935

Neo: -

Age: -

 SLC17A8 0.956 - - - - - 0.956 Mlig455_045935 {REF} {Length: 3220} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_38152} {RNA1310_33327} {RNA815_25224}
7. MligTC455_51337 178 3.71 Mlig455_037475

Neo: -

Age: -

 IARS2 0.954 - - - - - 0.954 Mlig455_037475 {REF} {Length: 3731} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=453.9]; tRNA synthetases class I (M) [PF09334.13, score=66.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=47.6]; Leucyl-tRNA synthetase, Domain 2 [PF13603.8, score=24.7]} {Human: ENSG00000067704, IARS2, isoleucyl-tRNA synthetase 2, mitochondrial, [RH, Score=553, Expect=0.0]} {Mouse: ENSMUSG00000026618, Iars2, isoleucine-tRNA synthetase 2, mitochondrial, [RH, Score=556, Expect=0.0]} {Dmel: FBgn0036569, IleRS-m, Isoleucyl-tRNA synthetase, mitochondrial, [RH, Score=510, Expect=3e-165]} {Celegans: WBGene00002153, iars-2, Isoleucyl Amino-acyl tRNA Synthetase, [RH, Score=462, Expect=4e-147]} {Smed: dd_Smed_v6_7613_0_1, dd_Smed_v6_7613_0_1, [RH, Score=529, Expect=1e-172]} {RNA1509_14916} {RNA1310_3724, RNA1509_14916} {RNA1509_14916, RNA815_38112}
8. MligTC455_40712 18 0.37 Mlig455_027658

Neo: -

Age: -

 KCNMA1 0.952 - - - - 0.952 - Mlig455_027658 {REF} {Length: 5932} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.4]; Ion transport protein [PF00520.33, score=61.9]; Ion channel [PF07885.18, score=48.2]; TrkA-N domain [PF02254.20, score=21.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1056, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1170, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_9989}
9. MligTC455_41558 39 0.81 Mlig455_062914

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_062914 {REF} {Length: 851} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49004} {RNA1310_7252.1} {RNA815_39493}

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