Data search
Results for MligTC455_40729
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40729 | 382 | 7.96 | Mlig455_043873 | Neo: - |
BBS5 | Mlig455_043873 {REF} {Length: 2357} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=445.8]; Vacuolar protein sorting protein 36 Vps36 [PF11605.10, score=22.5]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [Score=420, Expect=3e-146]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [Score=427, Expect=5e-149]} {Dmel: FBgn0037280, CG1126, [Score=291, Expect=4e-95]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [Score=290, Expect=5e-95]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [Score=409, Expect=3e-142]} {RNA1509_25092, RNA1509_37475, RNA1509_57417} {RNA1310_12052, RNA1509_37475, RNA1509_57417} {RNA1509_37475, RNA1509_57417, RNA815_9361.1} |
Cumulative graph for MligTC455_40729
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.92 | 3.133 | 0.06427 | 0.57518 | |
| RegionR2 | 2.52 | 3.133 | 0.00474 | 0.06197 | |
| RegionR3 | 1.453 | 3.133 | 0.09086 | 0.53212 | |
| RegionR4 | 0.01 | 3.133 | 0.84877 | 1.00000 | |
| RegionR5 | -0.261 | 3.133 | 0.91950 | 1.00000 | |
| RegionR6 | 0.992 | 3.133 | 0.29115 | 0.88288 | |
| RegionR7 | 0.376 | 3.133 | 0.69679 | 1.00000 | |
| RegionR8 | 1.831 | 3.133 | 0.05701 | 0.46650 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.698 | 3.133 | 0.14885 | 0.88976 | |
| RegenerationR2 | -0.314 | 3.133 | 0.61092 | 0.91976 | |
| RegenerationR3 | -0.142 | 3.133 | 0.84352 | 0.99582 | |
| RegenerationR4 | 1.092 | 3.133 | 0.15019 | 0.57814 | |
| RegenerationR5 | -0.286 | 3.133 | 0.69798 | 0.95082 | |
| RegenerationR6 | -1.417 | 3.133 | 0.08614 | 0.36723 | |
| RegenerationBL | 0.473 | 3.133 | 0.52594 | 0.88643 | |
| RegenerationTP | -0.557 | 3.133 | 0.53546 | 0.92342 |
Genes with expression patterns similar to MligTC455_40729
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40729 | 382 | 7.96 | Mlig455_043873 | Neo: - |
BBS5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043873 {REF} {Length: 2357} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=445.8]; Vacuolar protein sorting protein 36 Vps36 [PF11605.10, score=22.5]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [Score=420, Expect=3e-146]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [Score=427, Expect=5e-149]} {Dmel: FBgn0037280, CG1126, [Score=291, Expect=4e-95]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [Score=290, Expect=5e-95]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [Score=409, Expect=3e-142]} {RNA1509_25092, RNA1509_37475, RNA1509_57417} {RNA1310_12052, RNA1509_37475, RNA1509_57417} {RNA1509_37475, RNA1509_57417, RNA815_9361.1} |
| 2. | MligTC455_05237 | 434 | 9.03 | Mlig455_062019, Mlig455_063223, Mlig455_067366 | Neo: - Age: logFC(26M/2M)=0.268 Region-enriched R2: 3.012/0.04675 |
1.706 | - | - | 0.752 | - | - | 0.954 | Mlig455_062019 {REF} {Length: 5306} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=117.3]; Metallo-beta-lactamase superfamily [PF00753.29, score=66.9]; WD domain, G-beta repeat [PF00400.34, score=26.9]; Beta-lactamase superfamily domain [PF12706.9, score=23.5]} {RNA1509_5018} {RNA1310_8833} {RNA815_3106.1} Mlig455_063223 {REF} {Length: 6782} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=116.8]; Metallo-beta-lactamase superfamily [PF00753.29, score=67.6]; WD domain, G-beta repeat [PF00400.34, score=36.0]; Alkyl sulfatase C-terminal [PF14864.8, score=24.6]; Beta-lactamase superfamily domain [PF12706.9, score=23.3]} {RNA1509_5018} {RNA1310_8833} {RNA815_3106.1} Mlig455_067366 {REF} {Length: 6771} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=117.8]; Metallo-beta-lactamase superfamily [PF00753.29, score=66.2]; WD domain, G-beta repeat [PF00400.34, score=33.0]; Alkyl sulfatase C-terminal [PF14864.8, score=24.5]; Beta-lactamase superfamily domain [PF12706.9, score=23.2]} {RNA1509_50108, RNA1509_5018} {RNA1310_8833, RNA1509_50108} {RNA1509_50108, RNA815_3106.1} |
|
| 3. | MligTC455_35352 | 1664 | 34.67 | Mlig455_067185 | Neo: - Age: - Region-enriched R2: 1.216/0.01510 Regeneration-downregulated R6: -1.685 Regeneration-depleted R6: -1.685 |
AF241726.2 | 0.977 | - | 0.977 | - | - | - | - | Mlig455_067185 {REF} {Length: 1953} {Pfam: Tetraspanin family [PF00335.22, score=79.0]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=60.5, Expect=6e-10]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=60.1, Expect=7e-10]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=45.8, Expect=1e-05]} {Smed: dd_Smed_v6_3175_0_1, dd_Smed_v6_3175_0_1, [Score=100, Expect=2e-24]} {RNA1509_46723, RNA1509_52812} {RNA1310_15363, RNA1509_46723, RNA1509_52812} {RNA1509_46723, RNA1509_52812, RNA815_5523} |
| 4. | MligTC455_53843 | 1448 | 30.17 | Mlig455_048664 | Neo: - Age: logFC(26M/2M)=0.488 |
0.976 | - | 0.976 | - | - | - | - | Mlig455_048664 {REF} {Length: 1660} {RNA1509_15580} {RNA1310_24090, RNA1509_15580} {RNA1509_15580, RNA815_10676.2} | |
| 5. | MligTC455_21500 | 120 | 2.49 | Mlig455_002512 | Neo: - Age: - |
MTMR9 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_002512 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=203.7]} {Human: ENSG00000104643, MTMR9, myotubularin related protein 9, [Score=233, Expect=1e-68]} {Mouse: ENSMUSG00000035078, Mtmr9, myotubularin related protein 9, [Score=235, Expect=1e-69]} {Dmel: FBgn0035945, CG5026, [Score=179, Expect=2e-48]} {Celegans: WBGene00003479, mtm-9, Myotubularin-related protein 9, [Score=171, Expect=3e-46]} {Smed: dd_Smed_v6_5322_0_1, dd_Smed_v6_5322_0_1, [Score=140, Expect=2e-35]} {RNA1509_13620} {RNA1310_11099} {RNA815_7719} |
| 6. | MligTC455_50975 | 173 | 3.6 | Mlig455_014388 | Neo: - Age: Down-Up-Up |
CHRNB3 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_014388 {REF} {Length: 1742} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=101.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=23.6]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=110, Expect=4e-26]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=108, Expect=2e-25]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=107, Expect=5e-25]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=7e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=105, Expect=2e-24]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=114, Expect=5e-28]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=107, Expect=2e-25]} {Celegans: WBGene00000955, des-2, Acetylcholine receptor subunit alpha-type des-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_26232_0_1, dd_Smed_v6_26232_0_1, [Score=157, Expect=2e-43]} {RNA1310_54548} {RNA815_33490} |
| 7. | MligTC455_28782 | 353 | 7.36 | Mlig455_057246 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.269 Region-specific R4: 3.701 Region-enriched R4: 2.292/0.00672 |
ANKRD50 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_057246 {REF} {Length: 7560} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=91.0]; Ankyrin repeat [PF13606.8, score=53.3]; Ankyrin repeats (many copies) [PF13637.8, score=53.3]; Ankyrin repeat [PF00023.32, score=41.6]; Ankyrin repeats (many copies) [PF13857.8, score=41.2]; Mab-21 protein [PF03281.16, score=38.0]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=70.9, Expect=2e-11]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=72.0, Expect=7e-12]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=68.2, Expect=8e-11]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_7952_0_2, dd_Smed_v6_7952_0_2, [Score=57.8, Expect=6e-08]} {RNA1509_26281} {RNA1310_3771.1} {RNA815_6576.1} |
| 8. | MligTC455_06799 | 162 | 3.38 | Mlig455_031787 | Neo: - Age: - |
PRR9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_031787 {REF} {Length: 3692} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-07]} {RNA1509_12420} {RNA1310_87698} {RNA815_45856.1} |
| 9. | MligTC455_51865 | 187 | 3.9 | Mlig455_052681 | Neo: - Age: Down-Up-Up |
0.95 | - | - | - | 0.950 | - | - | Mlig455_052681 {REF} {Length: 434} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_37253} {RNA1310_27840} {RNA815_29346.1} |
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