M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_06799

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06799 162 3.38 Mlig455_031787

Neo: -

Age: -

 PRR9 Mlig455_031787 {REF} {Length: 3692} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-07]} {RNA1509_12420} {RNA1310_87698} {RNA815_45856.1}

Cumulative graph for MligTC455_06799

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.106 2.207 0.99962 1.00000
RegionR2 1.637 2.207 0.34094 0.73308
RegionR3 -0.698 2.207 0.97287 1.00000
RegionR4 2.743 2.207 0.05057 0.19423
RegionR5 0.883 2.207 0.58304 0.94141
RegionR6 0.482 2.207 0.67294 1.00000
RegionR7 1.616 2.207 0.36263 0.99801
RegionR8 -2.558 2.207 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.878 2.207 0.36320 1.00000
RegenerationR2 2.311 2.207 0.05905 0.39994
RegenerationR3 3.745 2.207 0.02882 0.30524
RegenerationR4 0.391 2.207 0.81266 0.99043
RegenerationR5 2.521 2.207 0.06924 0.41349
RegenerationR6 3.114 2.207 0.06804 0.32690
RegenerationBL 2.72 2.207 0.16186 0.48245
RegenerationTP 4.073 2.207 0.06410 0.40960


Genes with expression patterns similar to MligTC455_06799

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06799 162 3.38 Mlig455_031787

Neo: -

Age: -

 PRR9 4 - - 1.000 1.000 1.000 1.000 Mlig455_031787 {REF} {Length: 3692} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-07]} {RNA1509_12420} {RNA1310_87698} {RNA815_45856.1}
2. MligTC455_01427 18 0.37 Mlig455_048981

Neo: -

Age: -

 1.835 - - 0.953 - 0.882 - Mlig455_048981 {REF} {Length: 598} {RNA1509_16349} {RNA1310_2575}
3. MligTC455_01000 28 0.58 Mlig455_038705

Neo: -

Age: -

 1.824 - - 0.957 - 0.867 - Mlig455_038705 {REF} {Length: 427} {NoTransDecoderORF} {RNA1310_30853}
4. MligTC455_13588 43 0.9 Mlig455_070234

Neo: -

Age: -

 1.741 - - 0.951 - 0.790 - Mlig455_070234 {REF} {Length: 857} {Pfam: Tup N-terminal [PF08581.12, score=24.8]} {RNA1310_118445}
5. MligTC455_21772 43 0.89 Mlig455_023511, Mlig455_023557

Neo: -

Age: -

 1.723 - - 0.956 - 0.767 -

Mlig455_023511 {REF} {Length: 883} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_89227} {RNA815_38499}

Mlig455_023557 {REF} {Length: 631} {NoTransDecoderORF} {RNA1509_2739} {RNA1310_89227} {RNA815_38499}
6. MligTC455_27112 46 0.97 Mlig455_055117

Neo: -

Age: -

 1.714 - - 0.976 - 0.738 - Mlig455_055117 {REF} {Length: 2142} {RNA1509_39623} {RNA1310_23482} {RNA815_21728.1}
7. MligTC455_28985 114 2.38 Mlig455_058931

Neo: -

Age: -

 1.692 - - 0.950 - 0.742 - Mlig455_058931 {REF} {Length: 5896} {RNA1509_20157} {RNA1310_23482} {RNA815_318.1}
8. MligTC455_29088 121 2.52 Mlig455_018225, Mlig455_020848, Mlig455_062213

Neo: -

Age: -

 1.678 - - 0.705 - 0.973 -

Mlig455_018225 {REF} {Length: 2763} {Pfam: Integrase core domain [PF00665.28, score=36.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=57.4, Expect=3e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020848 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}

Mlig455_062213 {REF} {Length: 182} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}
9. MligTC455_36487 138 2.88 Mlig455_013543

Neo: -

Age: -

 0.99 - - - - 0.990 - Mlig455_013543 {REF} {Length: 2784} {NoTransDecoderORF} {RNA1509_55514} {RNA1310_26481} {RNA815_10967.1}
10. MligTC455_06924 36 0.75 Mlig455_038179

Neo: -

Age: -

Region-enriched R2: 10.576/0.00004

 0.978 - - - - 0.978 - Mlig455_038179 {REF} {Length: 2112} {NoTransDecoderORF} {RNA1310_60531} {RNA815_18496.1}
11. MligTC455_22441 215 4.49 Mlig455_046125, Mlig455_051765

Neo: -

Age: Up-Up-Down

 0.974 - - - - 0.974 -

Mlig455_046125 {REF} {Length: 1618} {RNA1509_26358} {RNA1310_19270} {RNA815_9662}

Mlig455_051765 {REF} {Length: 4290} {RNA1509_4722} {RNA1310_655.1} {RNA815_335.1}
12. MligTC455_05237 434 9.03 Mlig455_062019, Mlig455_063223, Mlig455_067366

Neo: -

Age: logFC(26M/2M)=0.268

Region-enriched R2: 3.012/0.04675

 0.971 - - - - - 0.971

Mlig455_062019 {REF} {Length: 5306} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=117.3]; Metallo-beta-lactamase superfamily [PF00753.29, score=66.9]; WD domain, G-beta repeat [PF00400.34, score=26.9]; Beta-lactamase superfamily domain [PF12706.9, score=23.5]} {RNA1509_5018} {RNA1310_8833} {RNA815_3106.1}

Mlig455_063223 {REF} {Length: 6782} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=116.8]; Metallo-beta-lactamase superfamily [PF00753.29, score=67.6]; WD domain, G-beta repeat [PF00400.34, score=36.0]; Alkyl sulfatase C-terminal [PF14864.8, score=24.6]; Beta-lactamase superfamily domain [PF12706.9, score=23.3]} {RNA1509_5018} {RNA1310_8833} {RNA815_3106.1}

Mlig455_067366 {REF} {Length: 6771} {Pfam: Alkyl sulfatase dimerisation [PF14863.8, score=117.8]; Metallo-beta-lactamase superfamily [PF00753.29, score=66.2]; WD domain, G-beta repeat [PF00400.34, score=33.0]; Alkyl sulfatase C-terminal [PF14864.8, score=24.5]; Beta-lactamase superfamily domain [PF12706.9, score=23.2]} {RNA1509_50108, RNA1509_5018} {RNA1310_8833, RNA1509_50108} {RNA1509_50108, RNA815_3106.1}
13. MligTC455_21792 120 2.5 Mlig455_019461, Mlig455_062164

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_019461 {REF} {Length: 1989} {RNA1509_57867} {RNA1310_75051} {RNA815_43995.1}

Mlig455_062164 {REF} {Length: 1297} {RNA1509_57867} {RNA1310_23482} {RNA815_21848}
14. MligTC455_35617 108 2.24 Mlig455_048363

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_048363 {REF} {Length: 5379} {RNA1310_66856}
15. MligTC455_27375 76 1.58 Mlig455_041864

Neo: -

Age: -

 GTPBP2 0.967 - - 0.967 - - - Mlig455_041864 {REF} {Length: 5786} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=77.0]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=22.4]} {Human: ENSG00000172432, GTPBP2, GTP binding protein 2, [Score=409, Expect=4e-134]} {Mouse: ENSMUSG00000023952, Gtpbp2, GTP binding protein 2, [Score=408, Expect=4e-134]} {Dmel: FBgn0037391, CG2017, [Score=361, Expect=5e-116]} {Celegans: WBGene00011449, T04H1.2, [RH, Score=347, Expect=5e-111]} {Smed: dd_Smed_v6_10435_0_1, dd_Smed_v6_10435_0_1, [RH, Score=330, Expect=1e-102]} {RNA1509_56423} {RNA1310_9075, RNA1509_56423} {RNA1509_56423, RNA815_7492}
16. MligTC455_28156 802 16.71 Mlig455_003147, Mlig455_032425, Mlig455_034911, Mlig455_035373, Mlig455_051607, Mlig455_054980, Mlig455_057443

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_003147 {REF} {Length: 967} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121}

Mlig455_032425 {REF} {Length: 1839} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_2198.1}

Mlig455_034911 {REF} {Length: 964} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121}

Mlig455_035373 {REF} {Length: 283} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}

Mlig455_051607 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121}

Mlig455_054980 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121}

Mlig455_057443 {REF} {Length: 938} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17737.3} {RNA815_39121}
17. MligTC455_37558 61 1.28 Mlig455_004087

Neo: -

Age: -

 SLC16A12 0.966 - - 0.966 - - - Mlig455_004087 {REF} {Length: 3069} {Pfam: Major Facilitator Superfamily [PF07690.18, score=123.6]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=53.4]; Vacuole effluxer Atg22 like [PF11700.10, score=27.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=194, Expect=3e-55]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [RH, Score=194, Expect=1e-55]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=169, Expect=5e-46]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=154, Expect=6e-41]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=179, Expect=7e-50]} {RNA1509_33139} {RNA1310_17032, RNA1509_33139} {RNA1509_33139, RNA815_6570}
18. MligTC455_42582 101 2.11 Mlig455_006503

Neo: -

Age: Up-Down-Down

 MOSPD1 0.965 - - - - 0.965 - Mlig455_006503 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=49.6]} {Human: ENSG00000101928, MOSPD1, motile sperm domain containing 1, [RH, Score=93.6, Expect=1e-22]} {Mouse: ENSMUSG00000023074, Mospd1, motile sperm domain containing 1, [RH, Score=95.1, Expect=2e-23]} {RNA1509_17503} {RNA1310_37601} {RNA815_17755}
19. MligTC455_29122 44 0.92 Mlig455_024416

Neo: -

Age: -

Regeneration-enriched R4: 12.144
Regeneration-enriched R3: 11.972
Regeneration-enriched R5: 11.411
Regeneration-enriched R6: 11.095
Regeneration-enriched TP: 10.240
Regeneration-enriched R2: 8.714

 GRXCR1 0.963 - - - - 0.963 - Mlig455_024416 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=27.6]} {Human: ENSG00000215203, GRXCR1, glutaredoxin and cysteine rich domain containing 1, [RH, Score=112, Expect=2e-28]} {Mouse: ENSMUSG00000068082, Grxcr1, glutaredoxin, cysteine rich 1, [RH, Score=114, Expect=2e-29]} {Dmel: FBgn0051559, CG31559, [RH, Score=110, Expect=8e-27]} {RNA1509_48519} {RNA1310_27075, RNA1509_48519} {RNA1509_48519, RNA815_22070.1}
20. MligTC455_28324 96 1.99 Mlig455_008984

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_008984 {REF} {Length: 330} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
21. MligTC455_24415 34 0.71 Mlig455_028638

Neo: -

Age: -

Region-enriched R5: 3.666/0.03059

 NFIA 0.96 - - 0.960 - - - Mlig455_028638 {REF} {Length: 4225} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.8, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.7, Expect=5e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.1, Expect=8e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=2e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355} {RNA1310_4670.1} {RNA815_17090}
22. MligTC455_01352 51 1.07 Mlig455_068000

Neo: -

Age: -

Region-enriched R4: 4.302/0.02433

 0.959 - - 0.959 - - - Mlig455_068000 {REF} {Length: 551} {NoTransDecoderORF} {RNA1509_58830} {RNA1310_37977.2} {RNA815_19463}
23. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
24. MligTC455_29981 70 1.45 Mlig455_054226

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_054226 {REF} {Length: 956} {Celegans: WBGene00016348, C33E10.6, [Score=98.2, Expect=2e-23]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=84.7, Expect=4e-19]} {RNA1509_8360} {RNA1310_436.1} {RNA815_1671.1}
25. MligTC455_07064 5 0.11 Mlig455_046435

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_046435 {REF} {Length: 1865} {RNA1509_59289} {RNA1310_19675, RNA1509_59289}
26. MligTC455_29187 133 2.77 Mlig455_018313, Mlig455_030181

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_018313 {REF} {Length: 2593} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_030181 {REF} {Length: 4146} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-07]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}
27. MligTC455_37718 606 12.62 Mlig455_020685, Mlig455_024415, Mlig455_032310, Mlig455_033332, Mlig455_047018, Mlig455_056964

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_020685 {REF} {Length: 2294} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_024415 {REF} {Length: 2109} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_032310 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_21106} {RNA815_43995.2}

Mlig455_033332 {REF} {Length: 2377} {RNA1509_57867} {RNA1310_24332} {RNA815_23786}

Mlig455_047018 {REF} {Length: 1021} {TRANSSPLICED} {RNA1509_47311} {RNA1310_36606.2} {RNA815_21848}

Mlig455_056964 {REF} {Length: 2243} {RNA1509_40552} {RNA1310_1374.1} {RNA815_23786}
28. MligTC455_44757 573 11.93 Mlig455_027141, Mlig455_030701

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_027141 {REF} {Length: 1533} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}

Mlig455_030701 {REF} {Length: 1622} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}
29. MligTC455_47786 14 0.3 Mlig455_063167

Neo: -

Age: -

 KREMEN1 0.957 - - 0.957 - - - Mlig455_063167 {REF} {Length: 1601} {Pfam: WSC domain [PF01822.21, score=49.1]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.1, Expect=2e-07]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=55.8, Expect=2e-08]} {RNA1509_28510} {RNA1310_44003} {RNA815_48857}
30. MligTC455_55577 29 0.6 Mlig455_023740

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_023740 {REF} {Length: 55} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_43082}
31. MligTC455_15477 38 0.78 Mlig455_032839

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.944/0.03018

 0.956 - - 0.956 - - - Mlig455_032839 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1310_94743} {RNA815_50988}
32. MligTC455_41270 184 3.83 Mlig455_028580, Mlig455_028598, Mlig455_056910

Neo: -

Age: -

Region-enriched R3: 4.311/0.04210

 0.956 - - - - 0.956 -

Mlig455_028580 {REF} {Length: 1219} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=58.0]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=53.5, Expect=4e-09]} {RNA1310_42807} {RNA815_40719}

Mlig455_028598 {REF} {Length: 1219} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=58.0]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=53.5, Expect=4e-09]} {RNA1310_42807} {RNA815_40719}

Mlig455_056910 {REF} {Length: 1219} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=58.0]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=53.5, Expect=4e-09]} {RNA1310_42807} {RNA815_40719}
33. MligTC455_20622 1920 39.99 Mlig455_005399

Neo: -

Age: -

Regeneration-upregulated TP: 2.098

Regeneration-enriched TP: 2.098

 0.955 - - - - 0.955 - Mlig455_005399 {REF} {Length: 1131} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12443, RNA1509_3} {RNA1310_14828.1, RNA1509_12443, RNA1509_3} {RNA1509_12443, RNA1509_3, RNA815_44673}
34. MligTC455_26265 71 1.48 Mlig455_031655

Neo: -

Age: -

Region-enriched R4: 3.585/0.04668

 0.955 - - 0.955 - - - Mlig455_031655 {REF} {Length: 5413} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=46.4]} {RNA1509_59633} {RNA1310_5450.1} {RNA815_7717.1}
35. MligTC455_37759 57 1.19 Mlig455_062273

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.387

 0.955 - - 0.955 - - - Mlig455_062273 {REF} {Length: 1687} {RNA1509_19182} {RNA1310_10020, RNA1509_19182} {RNA1509_19182, RNA815_5696}
36. MligTC455_45147 83 1.72 Mlig455_030535

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_030535 {REF} {Length: 2558} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.2]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=92.0, Expect=8e-22]} {RNA1509_45032} {RNA1310_21981} {RNA815_16677}
37. MligTC455_50319 55 1.14 Mlig455_028874

Neo: -

Age: logFC(26M/2M)=-0.326

 TPM1 0.955 - - - - 0.955 - Mlig455_028874 {REF} {Length: 2123} {Pfam: Tropomyosin [PF00261.22, score=101.6]; Tropomyosin like [PF12718.9, score=32.3]; Crescentin protein [PF19220.2, score=30.1]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=68.9, Expect=3e-13]; ENSG00000167460, TPM4, tropomyosin 4, [Score=68.2, Expect=5e-13]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=69.3, Expect=2e-13]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=68.9, Expect=2e-13]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=79.3, Expect=3e-17]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=78.6, Expect=4e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=65.1, Expect=3e-12]} {RNA1509_21869, RNA1509_28996, RNA1509_56934} {RNA1310_14612.1, RNA1509_21869, RNA1509_28996, RNA1509_56934} {RNA1509_21869, RNA1509_28996, RNA1509_56934, RNA815_9032}
38. MligTC455_36491 421 8.76 Mlig455_023802, Mlig455_030304, Mlig455_034629, Mlig455_050822

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_023802 {REF} {Length: 944} {NoTransDecoderORF} {RNA1509_46050} {RNA1310_18890.3} {RNA815_24468}

Mlig455_030304 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_101860} {RNA815_62864}

Mlig455_034629 {REF} {Length: 1103} {NoTransDecoderORF} {RNA1509_52098} {RNA1310_24226} {RNA815_10062.1}

Mlig455_050822 {REF} {Length: 265} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_317.1} {RNA815_24468}
39. MligTC455_40729 382 7.96 Mlig455_043873

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.551

 BBS5 0.954 - - - - - 0.954 Mlig455_043873 {REF} {Length: 2357} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=445.8]; Vacuolar protein sorting protein 36 Vps36 [PF11605.10, score=22.5]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [Score=420, Expect=3e-146]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [Score=427, Expect=5e-149]} {Dmel: FBgn0037280, CG1126, [Score=291, Expect=4e-95]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [Score=290, Expect=5e-95]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [Score=409, Expect=3e-142]} {RNA1509_25092, RNA1509_37475, RNA1509_57417} {RNA1310_12052, RNA1509_37475, RNA1509_57417} {RNA1509_37475, RNA1509_57417, RNA815_9361.1}
40. MligTC455_18454 37 0.78 Mlig455_025691

Neo: -

Age: -

Region-enriched R2: 4.778/0.02984

 0.953 - - - - 0.953 - Mlig455_025691 {REF} {Length: 1813} {RNA1310_101808}
41. MligTC455_38415 1262 26.3 Mlig455_024390, Mlig455_024503

Neo: -

Age: Up-Down-Down

 0.953 - - - - 0.953 -

Mlig455_024390 {REF} {Length: 7424} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.0]; Immunoglobulin I-set domain [PF07679.18, score=47.5]; Immunoglobulin domain [PF00047.27, score=39.6]; Immunoglobulin domain [PF13895.8, score=29.2]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=58.9, Expect=4e-08]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=58.5, Expect=5e-08]} {Smed: dd_Smed_v6_3934_0_1, dd_Smed_v6_3934_0_1, [Score=91.7, Expect=2e-18]} {RNA1509_4898} {RNA1310_3079.1} {RNA815_8412}

Mlig455_024503 {REF} {Length: 7623} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.6]; Immunoglobulin I-set domain [PF07679.18, score=47.7]; Immunoglobulin domain [PF00047.27, score=40.0]; Immunoglobulin domain [PF13895.8, score=30.9]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=64.3, Expect=1e-09]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=56.6, Expect=2e-07]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_13217_0_1, dd_Smed_v6_13217_0_1, [Score=69.3, Expect=1e-11]} {RNA1509_33099, RNA1509_4898} {RNA1310_3079.1, RNA1509_33099} {RNA1509_33099, RNA815_8412}
42. MligTC455_02324 121 2.51 Mlig455_045874

Neo: -

Age: -

Region-enriched R7: 4.211/0.00373

 HRASLS 0.952 - - - - 0.952 - Mlig455_045874 {REF} {Length: 1080} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.1]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=47.8, Expect=7e-06]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=47.4, Expect=5e-06]} {RNA1310_85008} {RNA815_46214}
43. MligTC455_29190 1229 25.6 Mlig455_007971, Mlig455_009556, Mlig455_018880, Mlig455_023619, Mlig455_024055, Mlig455_030028, Mlig455_033160, Mlig455_036253, Mlig455_038407, Mlig455_046624, Mlig455_054170, Mlig455_055115, Mlig455_059413, Mlig455_065747, Mlig455_068568, Mlig455_070474

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.272/0.01373

 0.952 - - 0.952 - - -

Mlig455_007971 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_009556 {REF} {Length: 2864} {Pfam: Procyclic acidic repetitive protein (PARP) [PF05887.13, score=20.4]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.2}

Mlig455_018880 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_023619 {REF} {Length: 3824} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531, RNA1509_39253} {RNA1310_20135, RNA1509_39253} {RNA1509_39253, RNA815_212.1}

Mlig455_024055 {REF} {Length: 3017} {Dmel: FBgn0029807, CG3108, [Score=57.4, Expect=1e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_030028 {REF} {Length: 4001} {RNA1509_13531} {RNA1310_13546} {RNA815_11087.1}

Mlig455_033160 {REF} {Length: 1351} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-07]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_036253 {REF} {Length: 2572} {Dmel: FBgn0029807, CG3108, [Score=60.8, Expect=1e-09]} {RNA1509_13531} {RNA1310_36535} {RNA815_212.1}

Mlig455_038407 {REF} {Length: 907} {Dmel: FBgn0029807, CG3108, [Score=62.8, Expect=5e-11]} {RNA1509_57258} {RNA1310_13546} {RNA815_31604}

Mlig455_046624 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_054170 {REF} {Length: 2186} {Dmel: FBgn0029807, CG3108, [Score=56.2, Expect=9e-08]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_055115 {REF} {Length: 2805} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_059413 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_065747 {REF} {Length: 1950} {Dmel: FBgn0029807, CG3108, [Score=54.3, Expect=2e-07]} {RNA1509_13531, RNA1509_56942} {RNA1310_13546, RNA1509_56942} {RNA1509_56942, RNA815_31604}

Mlig455_068568 {REF} {Length: 1632} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531} {RNA1310_58438} {RNA815_31604}

Mlig455_070474 {REF} {Length: 2731} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}
44. MligTC455_06941 19 0.4 Mlig455_062113

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_062113 {REF} {Length: 448} {NoTransDecoderORF} {RNA1509_36341} {RNA1310_8709} {RNA815_721.1}
45. MligTC455_30873 438 9.12 Mlig455_055862

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.365

 0.951 - - - - 0.951 - Mlig455_055862 {REF} {Length: 1696} {TRANSSPLICED} {RNA1509_24392} {RNA1310_35505.1, RNA1509_24392} {RNA1509_24392, RNA815_24879.2}
46. MligTC455_02323 125 2.59 Mlig455_042840

Neo: -

Age: -

Region-enriched R7: 3.998/0.00319

 HRASLS 0.95 - - - - 0.950 - Mlig455_042840 {REF} {Length: 1042} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.1]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=47.8, Expect=7e-06]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=47.8, Expect=4e-06]} {RNA1310_85008} {RNA815_46214}
47. MligTC455_09992 33 0.69 Mlig455_065598

Neo: -

Age: Up-Down-Down

 0.95 - - - - 0.950 - Mlig455_065598 {REF} {Length: 3825} {Pfam: WSC domain [PF01822.21, score=24.5]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.6, Expect=4e-06]} {RNA1509_29754} {RNA1310_34378, RNA1509_29754} {RNA1509_29754, RNA815_35918}
48. MligTC455_10526 30 0.63 Mlig455_034032

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_034032 {REF} {Length: 2620} {NoTransDecoderORF} {RNA1310_55520} {RNA815_23630}
49. MligTC455_10906 18 0.38 Mlig455_034473

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_034473 {REF} {Length: 1571} {RNA1509_25022} {RNA1310_121238} {RNA815_3404}
50. MligTC455_14603 15 0.31 Mlig455_012376

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_012376 {REF} {Length: 271} {NoTransDecoderORF}
51. MligTC455_34239 59 1.23 Mlig455_066405

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_066405 {REF} {Length: 3058} {RNA1310_22409} {RNA815_36594}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA