TomoSeq data search

Data search

Results for MligTC455_40737

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40737

692

14.42

Mlig455_031853

Neo: -

Age: -

CALM2

Mlig455_031853 {REF} {Length: 1015} {Pfam: EF hand [PF00036.34, score=116.1]; EF-hand domain pair [PF13499.8, score=98.9]; EF-hand domain [PF13405.8, score=96.2]; EF hand [PF13202.8, score=87.0]; EF-hand domain pair [PF13833.8, score=78.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.5]; EF-hand domain [PF14658.8, score=27.5]; Caleosin related protein [PF05042.15, score=22.5]; Dockerin type I domain [PF00404.20, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=3e-42]; ENSG00000160014, CALM3, calmodulin 3, [Score=139, Expect=4e-42]; ENSG00000198668, CALM1, calmodulin 1, [Score=139, Expect=4e-42]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=139, Expect=3e-42]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=139, Expect=3e-42]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=139, Expect=3e-42]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=133, Expect=6e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=7e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=137, Expect=6e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=137, Expect=5e-42]} {RNA1509_11242, RNA1509_41585, RNA1509_49885} {RNA1310_42284, RNA1509_41585, RNA1509_49885} {RNA1509_41585, RNA1509_49885, RNA815_5913.1}

Cumulative graph for MligTC455_40737

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.991	3.959	0.05386	0.54223
RegionR2	-0.265	3.959	0.69007	1.00000
RegionR3	0.461	3.959	0.38625	0.91794
RegionR4	1.106	3.959	0.07354	0.25048
RegionR5	-0.219	3.959	0.70250	1.00000
RegionR6	-0.031	3.959	0.96392	1.00000
RegionR7	-0.419	3.959	0.56799	1.00000
RegionR8	-2.625	3.959	0.02690	0.32006

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.37	3.959	0.30142	0.99791
RegenerationR2	0.428	3.959	0.47717	0.86181
RegenerationR3	0.269	3.959	0.67589	0.93909
RegenerationR4	0.653	3.959	0.30355	0.74523
RegenerationR5	1.392	3.959	0.02678	0.27789
RegenerationR6	0.273	3.959	0.68140	0.91501
RegenerationBL	1.041	3.959	0.17856	0.50725
RegenerationTP	1.609	3.959	0.07354	0.43410

Genes with expression patterns similar to MligTC455_40737

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40737	692	14.42	Mlig455_031853	Neo: - Age: -	CALM2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031853 {REF} {Length: 1015} {Pfam: EF hand [PF00036.34, score=116.1]; EF-hand domain pair [PF13499.8, score=98.9]; EF-hand domain [PF13405.8, score=96.2]; EF hand [PF13202.8, score=87.0]; EF-hand domain pair [PF13833.8, score=78.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.5]; EF-hand domain [PF14658.8, score=27.5]; Caleosin related protein [PF05042.15, score=22.5]; Dockerin type I domain [PF00404.20, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=3e-42]; ENSG00000160014, CALM3, calmodulin 3, [Score=139, Expect=4e-42]; ENSG00000198668, CALM1, calmodulin 1, [Score=139, Expect=4e-42]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=139, Expect=3e-42]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=139, Expect=3e-42]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=139, Expect=3e-42]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=133, Expect=6e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=7e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=137, Expect=6e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=137, Expect=5e-42]} {RNA1509_11242, RNA1509_41585, RNA1509_49885} {RNA1310_42284, RNA1509_41585, RNA1509_49885} {RNA1509_41585, RNA1509_49885, RNA815_5913.1}
2.	MligTC455_41793	128	2.66	Mlig455_056389	Neo: - Age: logFC(26M/2M)=-0.406	CCDC96	0.98	-	-	0.980	-	-	-	Mlig455_056389 {REF} {Length: 2189} {Pfam: Domain of unknown function (DUF4201) [PF13870.8, score=154.7]} {Human: ENSG00000173013, CCDC96, coiled-coil domain containing 96, [RH, Score=195, Expect=5e-54]} {Mouse: ENSMUSG00000050677, Ccdc96, coiled-coil domain containing 96, [RH, Score=195, Expect=4e-54]} {Smed: dd_Smed_v6_9313_0_1, dd_Smed_v6_9313_0_1, [RH, Score=201, Expect=5e-59]} {RNA1509_26742, RNA1509_58369} {RNA1310_8172.1, RNA1509_58369} {RNA1509_58369, RNA815_3762}
3.	MligTC455_40423	752	15.66	Mlig455_029299, Mlig455_058869	Neo: - Age: Down-Up-Down	CALM1	0.967	-	-	0.967	-	-	-	Mlig455_029299 {REF} {Length: 1144} {Pfam: EF-hand domain pair [PF13833.8, score=47.6]; EF-hand domain pair [PF13499.8, score=39.7]; EF hand [PF00036.34, score=31.4]; EF-hand domain [PF13405.8, score=29.4]; EF-hand domain [PF14658.8, score=24.4]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=100, Expect=1e-26]; ENSG00000143933, CALM2, calmodulin 2, [Score=100, Expect=1e-26]; ENSG00000160014, CALM3, calmodulin 3, [Score=100, Expect=1e-26]; ENSG00000178363, CALML3, calmodulin like 3, [Score=95.1, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=100, Expect=8e-27]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=100, Expect=8e-27]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=100, Expect=8e-27]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=98.2, Expect=4e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=98.2, Expect=3e-26]} {RNA1509_16604} {RNA1310_33121} {RNA815_17390} Mlig455_058869 {REF} {Length: 1325} {Pfam: EF-hand domain pair [PF13833.8, score=47.6]; EF-hand domain pair [PF13499.8, score=39.7]; EF hand [PF00036.34, score=31.4]; EF-hand domain [PF13405.8, score=29.4]; EF-hand domain [PF14658.8, score=24.4]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=100, Expect=1e-26]; ENSG00000143933, CALM2, calmodulin 2, [Score=100, Expect=1e-26]; ENSG00000160014, CALM3, calmodulin 3, [Score=100, Expect=1e-26]; ENSG00000178363, CALML3, calmodulin like 3, [Score=95.1, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=100, Expect=8e-27]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=100, Expect=8e-27]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=100, Expect=8e-27]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=98.2, Expect=4e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=98.2, Expect=3e-26]} {RNA1509_16604} {RNA1310_33121, RNA1509_16604} {RNA1509_16604, RNA815_17390}
4.	MligTC455_52928	703	14.65	Mlig455_047484	Neo: - Age: -	MAGI3	0.953	-	0.953	-	-	-	-	Mlig455_047484 {REF} {Length: 4954} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=218.7]; PDZ domain [PF17820.3, score=142.6]; PDZ domain [PF13180.8, score=85.4]; Guanylate kinase [PF00625.23, score=42.7]; WW domain [PF00397.28, score=20.6]} {Human: ENSG00000081026, MAGI3, membrane associated guanylate kinase, WW and PDZ domain containing 3, [RH, Score=288, Expect=1e-80]} {Mouse: ENSMUSG00000040003, Magi2, membrane associated guanylate kinase, WW and PDZ domain containing 2, [RH, Score=315, Expect=2e-89]} {Dmel: FBgn0034590, Magi, [RH, Score=204, Expect=2e-53]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=300, Expect=2e-85]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [RH, Score=657, Expect=0.0]} {RNA1509_8632} {RNA1310_3024} {RNA815_10565}
5.	MligTC455_04645	3218	67.03	Mlig455_070885	Neo: - Age: logFC(26M/2M)=0.309 Region-enriched R3: 1.082/0.00299	CMBL	0.951	-	-	-	-	-	0.951	Mlig455_070885 {REF} {Length: 1230} {Pfam: Dienelactone hydrolase family [PF01738.20, score=58.5]; alpha/beta hydrolase fold [PF00561.22, score=18.7]} {Human: ENSG00000164237, CMBL, carboxymethylenebutenolidase homolog, [RH, Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000022235, Cmbl, carboxymethylenebutenolidase-like (Pseudomonas), [RH, Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=130, Expect=7e-37]} {RNA1509_4080} {RNA1310_26918, RNA1509_4080} {RNA1509_4080, RNA815_11993}
6.	MligTC455_49022	378	7.87	Mlig455_008757	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_008757 {REF} {Length: 1456} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=24.1]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=19.0]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=130, Expect=5e-36]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1}

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