TomoSeq data search

Data search

Results for MligTC455_04645

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04645

3218

67.03

Mlig455_070885

Neo: -

Age: logFC(26M/2M)=0.309

Region-enriched R3: 1.082/0.00299

CMBL

Mlig455_070885 {REF} {Length: 1230} {Pfam: Dienelactone hydrolase family [PF01738.20, score=58.5]; alpha/beta hydrolase fold [PF00561.22, score=18.7]} {Human: ENSG00000164237, CMBL, carboxymethylenebutenolidase homolog, [RH, Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000022235, Cmbl, carboxymethylenebutenolidase-like (Pseudomonas), [RH, Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=130, Expect=7e-37]} {RNA1509_4080} {RNA1310_26918, RNA1509_4080} {RNA1509_4080, RNA815_11993}

Cumulative graph for MligTC455_04645

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.548	6.168	0.39958	1.00000
RegionR2	-0.044	6.168	0.90040	1.00000
RegionR3	1.082	6.168	0.00006	0.00299
RegionR4	0.927	6.168	0.00389	0.02987
RegionR5	0.948	6.168	0.00028	0.00370
RegionR6	0.399	6.168	0.16958	0.72641
RegionR7	-0.876	6.168	0.02090	0.26939
RegionR8	-1.888	6.168	0.00036	0.02169

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.904	6.168	0.22549	0.95604
RegenerationR2	0.187	6.168	0.56346	0.90040
RegenerationR3	-0.083	6.168	0.80188	0.98322
RegenerationR4	0.232	6.168	0.50246	0.87062
RegenerationR5	-0.083	6.168	0.79561	0.98738
RegenerationR6	0.414	6.168	0.22519	0.57049
RegenerationBL	0.985	6.168	0.00657	0.07861
RegenerationTP	1.05	6.168	0.01632	0.21944

Genes with expression patterns similar to MligTC455_04645

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04645	3218	67.03	Mlig455_070885	Neo: - Age: logFC(26M/2M)=0.309 Region-enriched R3: 1.082/0.00299	CMBL	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_070885 {REF} {Length: 1230} {Pfam: Dienelactone hydrolase family [PF01738.20, score=58.5]; alpha/beta hydrolase fold [PF00561.22, score=18.7]} {Human: ENSG00000164237, CMBL, carboxymethylenebutenolidase homolog, [RH, Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000022235, Cmbl, carboxymethylenebutenolidase-like (Pseudomonas), [RH, Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=130, Expect=7e-37]} {RNA1509_4080} {RNA1310_26918, RNA1509_4080} {RNA1509_4080, RNA815_11993}
2.	MligTC455_35632	6861	142.93	Mlig455_047206	Neo: - Age: - Region-enriched R3: 1.984/0.00032 Region-enriched R4: 1.605/0.01274 Region-enriched R5: 1.441/0.00908	DHDH	3.251	0.764	-	-	0.954	0.730	0.803	Mlig455_047206 {REF} {Length: 1483} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=86.6]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=32.8]} {Human: ENSG00000104808, DHDH, dihydrodiol dehydrogenase, [RH, Score=245, Expect=8e-79]} {Mouse: ENSMUSG00000011382, Dhdh, dihydrodiol dehydrogenase (dimeric), [RH, Score=247, Expect=1e-79]} {Dmel: FBgn0031418, CG3609, [Score=229, Expect=5e-73]} {Smed: dd_Smed_v6_7643_0_1, dd_Smed_v6_7643_0_1, [RH, Score=211, Expect=2e-66]} {RNA1509_4889} {RNA1310_24236} {RNA815_11111.1}
3.	MligTC455_27625	5733	119.44	Mlig455_018765	Neo: - Age: Down-Down-Up Region-enriched R3: 1.886/0.00051	MATN2	2.441	-	0.731	-	0.958	0.752	-	Mlig455_018765 {REF} {Length: 2544} {Pfam: von Willebrand factor type A domain [PF00092.30, score=235.9]; von Willebrand factor type A domain [PF13519.8, score=103.0]; von Willebrand factor type A domain [PF13768.8, score=54.3]; VWA domain containing CoxE-like protein [PF05762.16, score=36.8]; Protein of unknown function (DUF1194) [PF06707.13, score=35.1]} {Human: ENSG00000132561, MATN2, matrilin 2, [Score=97.1, Expect=3e-20]} {Mouse: ENSMUSG00000040533, Matn1, matrilin 1, cartilage matrix protein, [Score=105, Expect=1e-23]} {Celegans: WBGene00003482, mua-3, Transmembrane cell adhesion receptor mua-3, [Score=82.0, Expect=8e-16]} {Smed: dd_Smed_v6_2674_0_1, dd_Smed_v6_2674_0_1, [Score=92.0, Expect=3e-19]} {RNA1509_3165} {RNA1310_8996, RNA1509_3165} {RNA1509_3165, RNA815_2915.1}
4.	MligTC455_54045	1333	27.77	Mlig455_045113	Neo: - Age: Down-Up-Up	CNP	1.788	-	-	-	0.950	0.838	-	Mlig455_045113 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=81.3]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=87.0, Expect=5e-19]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=86.3, Expect=9e-19]} {Smed: dd_Smed_v6_2431_0_1, dd_Smed_v6_2431_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_28788, RNA1509_8015} {RNA1310_22119, RNA1509_28788, RNA1509_8015} {RNA1509_28788, RNA1509_8015, RNA815_29195}
5.	MligTC455_43368	6858	142.86	Mlig455_048986, Mlig455_049002	Neo: - Age: Up-Down-Down	ACHE	1.765	-	-	-	0.803	-	0.962	Mlig455_048986 {REF} {Length: 14781} {Pfam: Carboxylesterase family [PF00135.30, score=2484.2]; alpha/beta hydrolase fold [PF07859.15, score=129.3]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=238, Expect=8e-66]} {Mouse: ENSMUSG00000058019, Ces5a, carboxylesterase 5A, [RH, Score=209, Expect=1e-56]} {Dmel: FBgn0000024, Ace, Acetylcholine esterase, [Score=189, Expect=3e-49]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=213, Expect=1e-57]} {Smed: dd_Smed_v6_10334_0_1, dd_Smed_v6_10334_0_1, [Score=202, Expect=8e-54]} {RNA1509_1156, RNA1509_14744, RNA1509_15426, RNA1509_18645, RNA1509_25748, RNA1509_38830, RNA1509_6237, RNA1509_82, RNA1509_8879} {RNA1310_83.1, RNA1509_1156, RNA1509_14744, RNA1509_15426, RNA1509_18645, RNA1509_25748, RNA1509_38830, RNA1509_6237, RNA1509_8879} {RNA1509_1156, RNA1509_14744, RNA1509_15426, RNA1509_18645, RNA1509_25748, RNA1509_38830, RNA1509_6237, RNA1509_8879, RNA815_40.1} Mlig455_049002 {REF} {Length: 15214} {Pfam: Carboxylesterase family [PF00135.30, score=2695.8]; alpha/beta hydrolase fold [PF07859.15, score=131.9]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=238, Expect=1e-65]} {Mouse: ENSMUSG00000058019, Ces5a, carboxylesterase 5A, [RH, Score=211, Expect=7e-57]} {Dmel: FBgn0000024, Ace, Acetylcholine esterase, [Score=191, Expect=5e-50]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=207, Expect=1e-55]} {Smed: dd_Smed_v6_10334_0_1, dd_Smed_v6_10334_0_1, [Score=199, Expect=5e-53]} {RNA1509_82, RNA1509_8738} {RNA1310_83.1, RNA1509_8738} {RNA1509_8738, RNA815_40.1}
6.	MligTC455_37466	1949	40.61	Mlig455_031186	Neo: - Age: Down-Down-Up Region-enriched R3: 1.619/0.00008	ARHGEF10	1.751	-	-	-	0.957	-	0.794	Mlig455_031186 {REF} {Length: 5352} {Pfam: RhoGEF domain [PF00621.22, score=105.9]; WD40 repeated domain [PF19056.2, score=87.7]; PH domain [PF19057.2, score=32.3]} {Human: ENSG00000274726, ARHGEF10, Rho guanine nucleotide exchange factor 10, [RH, Score=289, Expect=7e-80]; ENSG00000104728, ARHGEF10, Rho guanine nucleotide exchange factor 10, [RH, Score=289, Expect=7e-80]} {Mouse: ENSMUSG00000071176, Arhgef10, Rho guanine nucleotide exchange factor (GEF) 10, [RH, Score=301, Expect=5e-84]} {Dmel: FBgn0263706, CG43658, [RH, Score=249, Expect=8e-67]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [Score=115, Expect=1e-25]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=112, Expect=7e-25]} {RNA1509_2853} {RNA1310_2593.1} {RNA815_1265}
7.	MligTC455_53125	3627	75.56	Mlig455_020221	Neo: - Age: Down-Down-Up Region-enriched R3: 1.492/0.00002 Region-enriched R4: 1.335/0.00357	CYP2U1	1.738	-	-	-	-	0.786	0.952	Mlig455_020221 {REF} {Length: 1944} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=321.5]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [RH, Score=269, Expect=3e-83]} {Mouse: ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [RH, Score=271, Expect=2e-84]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [RH, Score=271, Expect=2e-84]} {Dmel: FBgn0036910, Cyp305a1, [RH, Score=224, Expect=6e-67]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=261, Expect=4e-81]} {Smed: dd_Smed_v6_3919_0_3, dd_Smed_v6_3919_0_3, [RH, Score=309, Expect=1e-99]} {RNA1509_15011, RNA1509_21651, RNA1509_3932} {RNA1310_17532.1, RNA1509_15011, RNA1509_21651, RNA1509_3932} {RNA1509_15011, RNA1509_21651, RNA1509_3932, RNA815_6787}
8.	MligTC455_53877	1399	29.15	Mlig455_016664	Neo: - Age: logFC(26M/2M)=0.488 Region-enriched R3: 1.947/0.00083 Region-enriched R4: 1.666/0.01644	CLCA1	1.696	-	-	-	0.953	0.743	-	Mlig455_016664 {REF} {Length: 4164} {Pfam: Calcium-activated chloride channel N terminal [PF08434.13, score=169.0]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=166, Expect=4e-43]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=163, Expect=2e-42]} {RNA1509_1021} {RNA1310_5461.1} {RNA815_1665}
9.	MligTC455_45315	4773	99.43	Mlig455_037736	Neo: - Age: -		1.673	-	0.711	-	0.962	-	-	Mlig455_037736 {REF} {Length: 2269} {RNA1509_18494, RNA1509_5801} {RNA1310_12524.1, RNA1509_5801} {RNA1509_5801, RNA815_3944.1}
10.	MligTC455_21846	21288	443.49	Mlig455_029635	Neo: Neoblast Age: logFC(26M/2M)=0.389	RPL27A	0.964	-	-	-	-	0.964	-	Mlig455_029635 {REF} {Length: 588} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.21, score=63.8]} {Human: ENSG00000166441, RPL27A, ribosomal protein L27a, [RH, Score=225, Expect=2e-76]} {Mouse: ENSMUSG00000046364, Rpl27a, ribosomal protein L27A, [RH, Score=224, Expect=3e-76]} {Dmel: FBgn0285948, RpL27A, Ribosomal protein L27A, [RH, Score=206, Expect=4e-69]} {Celegans: WBGene00021350, Y37E3.8, [RH, Score=211, Expect=3e-71]} {Smed: dd_Smed_v6_155_1_1, dd_Smed_v6_155_1_1, [RH, Score=246, Expect=4e-85]} {RNA1509_8631} {RNA1310_56854} {RNA815_11321.1}
11.	MligTC455_46727	6297	131.18	Mlig455_058812	Neo: - Age: logFC(26M/2M)=0.222	ACADS	0.955	-	-	-	0.955	-	-	Mlig455_058812 {REF} {Length: 1500} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=170.9]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=121.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=90.5]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=80.8]} {Human: ENSG00000122971, ACADS, acyl-CoA dehydrogenase short chain, [RH, Score=535, Expect=0.0]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [RH, Score=529, Expect=0.0]} {Dmel: FBgn0038742, Arc42, [RH, Score=534, Expect=0.0]} {Celegans: WBGene00019433, acdh-3, Acyl CoA DeHydrogenase, [RH, Score=291, Expect=4e-95]} {Smed: dd_Smed_v6_5980_0_1, dd_Smed_v6_5980_0_1, [RH, Score=516, Expect=0.0]} {RNA1509_1565, RNA1509_18468} {RNA1310_17665, RNA1509_1565, RNA1509_18468} {RNA1509_1565, RNA1509_18468, RNA815_7620}
12.	MligTC455_20205	1866	38.88	Mlig455_034438	Neo: - Age: logFC(26M/2M)=0.508 Region-enriched R4: 1.387/0.03003		0.953	-	-	-	0.953	-	-	Mlig455_034438 {REF} {Length: 837} {RNA1509_15789, RNA1509_50882} {RNA1310_45627.1, RNA1509_15789, RNA1509_50882} {RNA1509_15789, RNA1509_50882, RNA815_4285}
13.	MligTC455_40737	692	14.42	Mlig455_031853	Neo: - Age: -	CALM2	0.951	-	-	-	-	-	0.951	Mlig455_031853 {REF} {Length: 1015} {Pfam: EF hand [PF00036.34, score=116.1]; EF-hand domain pair [PF13499.8, score=98.9]; EF-hand domain [PF13405.8, score=96.2]; EF hand [PF13202.8, score=87.0]; EF-hand domain pair [PF13833.8, score=78.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.5]; EF-hand domain [PF14658.8, score=27.5]; Caleosin related protein [PF05042.15, score=22.5]; Dockerin type I domain [PF00404.20, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=3e-42]; ENSG00000160014, CALM3, calmodulin 3, [Score=139, Expect=4e-42]; ENSG00000198668, CALM1, calmodulin 1, [Score=139, Expect=4e-42]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=139, Expect=3e-42]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=139, Expect=3e-42]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=139, Expect=3e-42]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=133, Expect=6e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=7e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=137, Expect=6e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=137, Expect=5e-42]} {RNA1509_11242, RNA1509_41585, RNA1509_49885} {RNA1310_42284, RNA1509_41585, RNA1509_49885} {RNA1509_41585, RNA1509_49885, RNA815_5913.1}

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