Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_40884 | 1166 | 24.29 | Mlig455_051978 | Neo: Neoblast, stringent Age: Up-Down-Down Regeneration-enriched R6: 1.871 |
ZNF512B | Mlig455_051978 {REF} {Length: 5501} {Human: ENSG00000196700, ZNF512B, zinc finger protein 512B, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=56.2, Expect=3e-07]} {Celegans: WBGene00010357, H03A11.2, [Score=50.4, Expect=1e-05]} {RNA1509_8438} {RNA1310_271} {RNA815_57.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.035 | 4.697 | 0.06398 | 0.57451 | |
RegionR2 | -0.092 | 4.697 | 0.86676 | 1.00000 | |
RegionR3 | 0.672 | 4.697 | 0.11442 | 0.58798 | |
RegionR4 | 0.682 | 4.697 | 0.11618 | 0.33976 | |
RegionR5 | 0.243 | 4.697 | 0.53507 | 0.89802 | |
RegionR6 | 0.869 | 4.697 | 0.04443 | 0.39388 | |
RegionR7 | 0.892 | 4.697 | 0.07379 | 0.52408 | |
RegionR8 | -1.229 | 4.697 | 0.12922 | 0.65914 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 2.286 | 4.697 | 0.06967 | 0.75209 | |
RegenerationR2 | 0.198 | 4.697 | 0.67711 | 0.94789 | |
RegenerationR3 | 1.12 | 4.697 | 0.01536 | 0.22662 | |
RegenerationR4 | 0.62 | 4.697 | 0.18029 | 0.62064 | |
RegenerationR5 | 1.487 | 4.697 | 0.00071 | 0.04456 | |
RegenerationR6 | 1.871 | 4.697 | 0.00003 | 0.00425 | |
RegenerationBL | 1.731 | 4.697 | 0.00028 | 0.00955 | |
RegenerationTP | 1.441 | 4.697 | 0.01296 | 0.19378 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_40884 | 1166 | 24.29 | Mlig455_051978 | Neo: Neoblast, stringent Age: Up-Down-Down Regeneration-enriched R6: 1.871 |
ZNF512B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051978 {REF} {Length: 5501} {Human: ENSG00000196700, ZNF512B, zinc finger protein 512B, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=56.2, Expect=3e-07]} {Celegans: WBGene00010357, H03A11.2, [Score=50.4, Expect=1e-05]} {RNA1509_8438} {RNA1310_271} {RNA815_57.1} |
2. | MligTC455_27291 | 3494 | 72.8 | Mlig455_040513 | Neo: Irradiation Age: logFC(26M/2M)=0.341 Regeneration-enriched BL: 1.592 |
DEK | 2.614 | - | - | 0.744 | 0.969 | - | 0.901 | Mlig455_040513 {REF} {Length: 2092} {Pfam: DEK C terminal domain [PF08766.13, score=46.1]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.3, Expect=4e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=8e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=59.7, Expect=3e-09]} {RNA1509_16418, RNA1509_3429} {RNA1310_12184, RNA1509_16418} {RNA1509_16418, RNA815_16871} |
3. | MligTC455_20391 | 3465 | 72.19 | Mlig455_000953 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.069/0.00002 Regeneration-upregulated BL: 1.238 Regeneration-enriched BL: 1.238 |
RBBP4 | 1.877 | - | - | - | 0.961 | - | 0.916 | Mlig455_000953 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=97.9]; WD domain, G-beta repeat [PF00400.34, score=93.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=629, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1310_7929.2, RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447, RNA815_2262.1} |
4. | MligTC455_31071 | 7346 | 153.04 | Mlig455_049657 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.405 Region-enriched R5: 1.127/0.00000 Regeneration-upregulated TP: 1.115 Regeneration-enriched TP: 1.115 |
SET | 1.811 | - | - | - | 0.950 | 0.861 | - | Mlig455_049657 {REF} {Length: 1751} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=118.7]} {Human: ENSG00000119335, SET, SET nuclear proto-oncogene, [RH, Score=280, Expect=1e-94]; ENSG00000230667, SETSIP, SET-like protein, [RH, Score=267, Expect=2e-89]} {Mouse: ENSMUSG00000054766, Set, SET nuclear oncogene, [RH, Score=282, Expect=2e-95]} {Dmel: FBgn0014879, Set, [RH, Score=221, Expect=1e-71]} {Celegans: WBGene00005007, spr-2, Suppressor of presenilin-2, [RH, Score=165, Expect=1e-49]} {Smed: dd_Smed_v6_393_0_1, dd_Smed_v6_393_0_1, [RH, Score=219, Expect=1e-71]} {RNA1509_20038} {RNA1310_13639} {RNA815_4883} |
5. | MligTC455_44892 | 642 | 13.37 | Mlig455_048764 | Neo: - Age: logFC(26M/2M)=0.308 |
SMARCC2 | 1.75 | - | - | - | 0.795 | - | 0.955 | Mlig455_048764 {REF} {Length: 4246} {Pfam: SWIRM-associated domain at the C-terminal [PF16498.7, score=52.9]; SWIRM-associated region 1 [PF16495.7, score=25.2]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=108, Expect=6e-24]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=110, Expect=2e-24]} {Dmel: FBgn0002783, mor, moira, [Score=89.0, Expect=6e-18]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=94.4, Expect=7e-20]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=90.1, Expect=2e-18]} {RNA1509_49479} {RNA1310_2189} {RNA815_8217} |
6. | MligTC455_27292 | 3532 | 73.59 | Mlig455_040525 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.300 Regeneration-enriched BL: 1.630 |
DEK | 1.706 | - | - | 0.743 | 0.963 | - | - | Mlig455_040525 {REF} {Length: 2029} {TRANSSPLICED} {Pfam: DEK C terminal domain [PF08766.13, score=46.8]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.7, Expect=3e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=6e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=60.5, Expect=2e-09]} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1310_12184, RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384, RNA815_16871} |
7. | MligTC455_46945 | 992 | 20.68 | Mlig455_025688 | Neo: Neoblast, stringent Age: Down-Down-Up Region-enriched R6: 3.040/0.00002 Regeneration-upregulated BL: 2.709 Regeneration-enriched BL: 2.709 |
RREB1 | 1.706 | - | - | - | 0.755 | - | 0.951 | Mlig455_025688 {REF} {Length: 2364} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=50.3]; C2H2-type zinc finger [PF13894.8, score=45.1]; Zinc-finger double domain [PF13465.8, score=38.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=21.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.1]} {Human: ENSG00000124782, RREB1, ras responsive element binding protein 1, [RH, Score=104, Expect=1e-22]} {Mouse: ENSMUSG00000039087, Rreb1, ras responsive element binding protein 1, [RH, Score=101, Expect=9e-22]} {Dmel: FBgn0003053, peb, pebbled, [Score=95.5, Expect=5e-20]} {Celegans: WBGene00018567, F47E1.3, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_10103_0_1, dd_Smed_v6_10103_0_1, [RH, Score=122, Expect=9e-30]} {RNA1509_41001, RNA1509_53538} {RNA1310_12985.1, RNA1509_41001, RNA1509_53538} {RNA1509_41001, RNA1509_53538, RNA815_27232} |
8. | MligTC455_39146 | 894 | 18.62 | Mlig455_031475 | Neo: Int S/G2/M Age: - |
1.68 | - | - | - | 0.969 | 0.711 | - | Mlig455_031475 {REF} {Length: 4141} {TRANSSPLICED} {Pfam: Putative aspartate racemase [PF14669.8, score=18.7]} {RNA1509_4947} {RNA1310_1498} {RNA815_4692} | |
9. | MligTC455_20987 | 1769 | 36.85 | Mlig455_028383, Mlig455_035961 | Neo: Irradiation Age: - Region-specific R5: 2.292 Region-enriched R5: 2.053/0.00000 |
0.991 | - | - | - | 0.991 | - | - | Mlig455_028383 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.4]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142} Mlig455_035961 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.1]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142} |
|
10. | MligTC455_20989 | 1573 | 32.76 | Mlig455_058431 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.772 Region-enriched R5: 2.338/0.00000 |
0.978 | - | - | - | 0.978 | - | - | Mlig455_058431 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.2]} {RNA1509_12547} {RNA1310_31319} {RNA815_14142} | |
11. | MligTC455_26121 | 551 | 11.47 | Mlig455_009309, Mlig455_009314, Mlig455_009328 | Neo: Neoblast Age: - |
GINS2 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_009309 {REF} {Length: 862} {Pfam: GINS complex protein [PF05916.13, score=19.0]} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [Score=68.9, Expect=5e-14]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [Score=69.7, Expect=2e-14]} {Dmel: FBgn0261976, Psf2, [Score=59.3, Expect=1e-10]} {RNA1509_45337} {RNA1310_110071} {RNA815_54718} Mlig455_009314 {REF} {Length: 2149} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [Score=65.9, Expect=7e-12]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [Score=67.8, Expect=1e-12]} {Dmel: FBgn0261976, Psf2, [Score=58.9, Expect=1e-09]} {RNA1509_45337} {RNA1310_16094.2} {RNA815_15247.1} Mlig455_009328 {REF} {Length: 941} {TRANSSPLICED} {Pfam: GINS complex protein [PF05916.13, score=73.6]} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [RH, Score=184, Expect=1e-58]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [RH, Score=191, Expect=2e-61]} {Dmel: FBgn0261976, Psf2, [RH, Score=150, Expect=2e-45]} {Smed: dd_Smed_v6_15389_0_1, dd_Smed_v6_15389_0_1, [RH, Score=117, Expect=7e-33]} {RNA1509_45337} {RNA1310_24811.1} {RNA815_15403.1} |
12. | MligTC455_21486 | 9101 | 189.61 | Mlig455_002496, Mlig455_002671 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.261 Regeneration-upregulated BL: 1.823 Regeneration-enriched BL: 1.823 |
HNRNPA1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_002496 {REF} {Length: 1995} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=117.6]; RNA recognition motif [PF16367.7, score=47.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=22.8]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=198, Expect=3e-61]} {Mouse: ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=187, Expect=1e-56]; ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=1e-56]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=177, Expect=3e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=180, Expect=5e-54]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=194, Expect=1e-60]} {RNA1509_12341, RNA1509_52984} {RNA1310_14034.1, RNA1509_52984} {RNA1509_52984, RNA815_4894} Mlig455_002671 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=117.6]; RNA recognition motif [PF16367.7, score=46.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=22.9]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=202, Expect=1e-62]} {Mouse: ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=190, Expect=5e-58]; ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=189, Expect=8e-58]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=180, Expect=2e-53]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=183, Expect=3e-55]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=197, Expect=8e-62]} {RNA1509_12341, RNA1509_55688} {RNA1310_14034.1, RNA1509_55688} {RNA1509_55688, RNA815_4894} |
13. | MligTC455_40013 | 1551 | 32.32 | Mlig455_045254, Mlig455_069174 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.916/0.00000 Regeneration-upregulated BL: 1.957 Regeneration-enriched BL: 1.957 |
MCM5 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_045254 {REF} {Length: 2658} {Pfam: MCM P-loop domain [PF00493.25, score=329.8]; MCM OB domain [PF17207.5, score=115.3]; MCM AAA-lid domain [PF17855.3, score=92.5]; MCM N-terminal domain [PF14551.8, score=58.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=25.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=834, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726} Mlig455_069174 {REF} {Length: 3194} {Pfam: MCM P-loop domain [PF00493.25, score=329.3]; MCM OB domain [PF17207.5, score=114.9]; MCM AAA-lid domain [PF17855.3, score=92.4]; MCM N-terminal domain [PF14551.8, score=57.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.9]; Endonuclease-reverse transcriptase [PF14529.8, score=21.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.1]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=932, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=803, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=833, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726} |
14. | MligTC455_25937 | 1835 | 38.22 | Mlig455_009272, Mlig455_016411 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_009272 {REF} {Length: 7436} {TRANSSPLICED} {RNA1509_5983} {RNA1310_1641.1} {RNA815_12846.1} Mlig455_016411 {REF} {Length: 502} {NoTransDecoderORF} {RNA1310_8260.1} {RNA815_37065} |
|
15. | MligTC455_33559 | 481 | 10.03 | Mlig455_007490 | Neo: Neoblast, stringent Age: Down-Up-Down Region-enriched R5: 1.152/0.00154 |
MCM3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_007490 {REF} {Length: 4147} {Pfam: MCM P-loop domain [PF00493.25, score=315.6]; MCM OB domain [PF17207.5, score=111.7]; MCM AAA-lid domain [PF17855.3, score=70.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=29.7]; MCM N-terminal domain [PF14551.8, score=23.0]} {Human: ENSG00000112118, MCM3, minichromosome maintenance complex component 3, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000041859, Mcm3, minichromosome maintenance complex component 3, [RH, Score=852, Expect=0.0]} {Dmel: FBgn0284442, Mcm3, Minichromosome maintenance 3, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003155, mcm-3, DNA helicase, [RH, Score=724, Expect=0.0]} {Smed: dd_Smed_v6_6734_0_1, dd_Smed_v6_6734_0_1, [RH, Score=818, Expect=0.0]} {RNA1509_21616, RNA1509_3186} {RNA1310_2792, RNA1509_21616} {RNA1509_21616, RNA815_3149.1} |
16. | MligTC455_23467 | 529 | 11.02 | Mlig455_014848 | Neo: Neoblast, stringent Age: - Region-enriched R4: 2.155/0.01385 |
AURKA | 0.954 | - | - | - | 0.954 | - | - | Mlig455_014848 {REF} {Length: 1810} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=136.7]; Kinase-like [PF14531.8, score=25.2]} {Human: ENSG00000087586, AURKA, aurora kinase A, [RH, Score=350, Expect=4e-119]; ENSG00000105146, AURKC, aurora kinase C, [RH, Score=337, Expect=2e-115]} {Mouse: ENSMUSG00000027496, Aurka, aurora kinase A, [RH, Score=352, Expect=3e-120]; ENSMUSG00000020897, Aurkb, aurora kinase B, [RH, Score=346, Expect=2e-118]} {Dmel: FBgn0000147, aurA, aurora A, [RH, Score=308, Expect=1e-102]} {Celegans: WBGene00000099, air-2, Aurora/IPL1-related protein kinase 2, [RH, Score=334, Expect=9e-115]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [RH, Score=271, Expect=2e-90]} {RNA1509_12454, RNA1509_38829, RNA1509_39385} {RNA1310_14817, RNA1509_38829, RNA1509_39385} {RNA1509_38829, RNA1509_39385, RNA815_6263} |