Data search


search
Exact
Search

Results for MligTC455_40884

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40884 1166 24.29 Mlig455_051978

Neo: Neoblast, stringent

Age: Up-Down-Down

Regeneration-enriched R6: 1.871
Regeneration-enriched BL: 1.731

ZNF512B Mlig455_051978 {REF} {Length: 5501} {Human: ENSG00000196700, ZNF512B, zinc finger protein 512B, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=56.2, Expect=3e-07]} {Celegans: WBGene00010357, H03A11.2, [Score=50.4, Expect=1e-05]} {RNA1509_8438} {RNA1310_271} {RNA815_57.1}

Cumulative graph for MligTC455_40884

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.035 4.697 0.06398 0.57451
RegionR2 -0.092 4.697 0.86676 1.00000
RegionR3 0.672 4.697 0.11442 0.58798
RegionR4 0.682 4.697 0.11618 0.33976
RegionR5 0.243 4.697 0.53507 0.89802
RegionR6 0.869 4.697 0.04443 0.39388
RegionR7 0.892 4.697 0.07379 0.52408
RegionR8 -1.229 4.697 0.12922 0.65914

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.286 4.697 0.06967 0.75209
RegenerationR2 0.198 4.697 0.67711 0.94789
RegenerationR3 1.12 4.697 0.01536 0.22662
RegenerationR4 0.62 4.697 0.18029 0.62064
RegenerationR5 1.487 4.697 0.00071 0.04456
RegenerationR6 1.871 4.697 0.00003 0.00425
RegenerationBL 1.731 4.697 0.00028 0.00955
RegenerationTP 1.441 4.697 0.01296 0.19378


Genes with expression patterns similar to MligTC455_40884

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40884 1166 24.29 Mlig455_051978

Neo: Neoblast, stringent

Age: Up-Down-Down

Regeneration-enriched R6: 1.871
Regeneration-enriched BL: 1.731

ZNF512B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_051978 {REF} {Length: 5501} {Human: ENSG00000196700, ZNF512B, zinc finger protein 512B, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=56.2, Expect=3e-07]} {Celegans: WBGene00010357, H03A11.2, [Score=50.4, Expect=1e-05]} {RNA1509_8438} {RNA1310_271} {RNA815_57.1}
2. MligTC455_27291 3494 72.8 Mlig455_040513

Neo: Irradiation

Age: logFC(26M/2M)=0.341

Regeneration-enriched BL: 1.592
Regeneration-enriched R6: 1.285

DEK 2.614 - - 0.744 0.969 - 0.901 Mlig455_040513 {REF} {Length: 2092} {Pfam: DEK C terminal domain [PF08766.13, score=46.1]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.3, Expect=4e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=8e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=59.7, Expect=3e-09]} {RNA1509_16418, RNA1509_3429} {RNA1310_12184, RNA1509_16418} {RNA1509_16418, RNA815_16871}
3. MligTC455_20391 3465 72.19 Mlig455_000953

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.069/0.00002

Regeneration-upregulated BL: 1.238

Regeneration-enriched BL: 1.238

RBBP4 1.877 - - - 0.961 - 0.916 Mlig455_000953 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=97.9]; WD domain, G-beta repeat [PF00400.34, score=93.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=629, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1310_7929.2, RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447, RNA815_2262.1}
4. MligTC455_31071 7346 153.04 Mlig455_049657

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.405

Region-enriched R5: 1.127/0.00000

Regeneration-upregulated TP: 1.115

Regeneration-enriched TP: 1.115

SET 1.811 - - - 0.950 0.861 - Mlig455_049657 {REF} {Length: 1751} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=118.7]} {Human: ENSG00000119335, SET, SET nuclear proto-oncogene, [RH, Score=280, Expect=1e-94]; ENSG00000230667, SETSIP, SET-like protein, [RH, Score=267, Expect=2e-89]} {Mouse: ENSMUSG00000054766, Set, SET nuclear oncogene, [RH, Score=282, Expect=2e-95]} {Dmel: FBgn0014879, Set, [RH, Score=221, Expect=1e-71]} {Celegans: WBGene00005007, spr-2, Suppressor of presenilin-2, [RH, Score=165, Expect=1e-49]} {Smed: dd_Smed_v6_393_0_1, dd_Smed_v6_393_0_1, [RH, Score=219, Expect=1e-71]} {RNA1509_20038} {RNA1310_13639} {RNA815_4883}
5. MligTC455_44892 642 13.37 Mlig455_048764

Neo: -

Age: logFC(26M/2M)=0.308

SMARCC2 1.75 - - - 0.795 - 0.955 Mlig455_048764 {REF} {Length: 4246} {Pfam: SWIRM-associated domain at the C-terminal [PF16498.7, score=52.9]; SWIRM-associated region 1 [PF16495.7, score=25.2]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=108, Expect=6e-24]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=110, Expect=2e-24]} {Dmel: FBgn0002783, mor, moira, [Score=89.0, Expect=6e-18]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=94.4, Expect=7e-20]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=90.1, Expect=2e-18]} {RNA1509_49479} {RNA1310_2189} {RNA815_8217}
6. MligTC455_27292 3532 73.59 Mlig455_040525

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.300

Regeneration-enriched BL: 1.630
Regeneration-enriched R6: 1.242

DEK 1.706 - - 0.743 0.963 - - Mlig455_040525 {REF} {Length: 2029} {TRANSSPLICED} {Pfam: DEK C terminal domain [PF08766.13, score=46.8]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.7, Expect=3e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=6e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=60.5, Expect=2e-09]} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1310_12184, RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384, RNA815_16871}
7. MligTC455_46945 992 20.68 Mlig455_025688

Neo: Neoblast, stringent

Age: Down-Down-Up

Region-enriched R6: 3.040/0.00002

Regeneration-upregulated BL: 2.709

Regeneration-enriched BL: 2.709

RREB1 1.706 - - - 0.755 - 0.951 Mlig455_025688 {REF} {Length: 2364} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=50.3]; C2H2-type zinc finger [PF13894.8, score=45.1]; Zinc-finger double domain [PF13465.8, score=38.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=21.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.1]} {Human: ENSG00000124782, RREB1, ras responsive element binding protein 1, [RH, Score=104, Expect=1e-22]} {Mouse: ENSMUSG00000039087, Rreb1, ras responsive element binding protein 1, [RH, Score=101, Expect=9e-22]} {Dmel: FBgn0003053, peb, pebbled, [Score=95.5, Expect=5e-20]} {Celegans: WBGene00018567, F47E1.3, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_10103_0_1, dd_Smed_v6_10103_0_1, [RH, Score=122, Expect=9e-30]} {RNA1509_41001, RNA1509_53538} {RNA1310_12985.1, RNA1509_41001, RNA1509_53538} {RNA1509_41001, RNA1509_53538, RNA815_27232}
8. MligTC455_39146 894 18.62 Mlig455_031475

Neo: Int S/G2/M

Age: -

1.68 - - - 0.969 0.711 - Mlig455_031475 {REF} {Length: 4141} {TRANSSPLICED} {Pfam: Putative aspartate racemase [PF14669.8, score=18.7]} {RNA1509_4947} {RNA1310_1498} {RNA815_4692}
9. MligTC455_20987 1769 36.85 Mlig455_028383, Mlig455_035961

Neo: Irradiation

Age: -

Region-specific R5: 2.292

Region-enriched R5: 2.053/0.00000

0.991 - - - 0.991 - -

Mlig455_028383 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.4]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}

Mlig455_035961 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.1]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}
10. MligTC455_20989 1573 32.76 Mlig455_058431

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.772

Region-enriched R5: 2.338/0.00000

0.978 - - - 0.978 - - Mlig455_058431 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.2]} {RNA1509_12547} {RNA1310_31319} {RNA815_14142}
11. MligTC455_26121 551 11.47 Mlig455_009309, Mlig455_009314, Mlig455_009328

Neo: Neoblast

Age: -

GINS2 0.967 - - - 0.967 - -

Mlig455_009309 {REF} {Length: 862} {Pfam: GINS complex protein [PF05916.13, score=19.0]} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [Score=68.9, Expect=5e-14]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [Score=69.7, Expect=2e-14]} {Dmel: FBgn0261976, Psf2, [Score=59.3, Expect=1e-10]} {RNA1509_45337} {RNA1310_110071} {RNA815_54718}

Mlig455_009314 {REF} {Length: 2149} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [Score=65.9, Expect=7e-12]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [Score=67.8, Expect=1e-12]} {Dmel: FBgn0261976, Psf2, [Score=58.9, Expect=1e-09]} {RNA1509_45337} {RNA1310_16094.2} {RNA815_15247.1}

Mlig455_009328 {REF} {Length: 941} {TRANSSPLICED} {Pfam: GINS complex protein [PF05916.13, score=73.6]} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [RH, Score=184, Expect=1e-58]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [RH, Score=191, Expect=2e-61]} {Dmel: FBgn0261976, Psf2, [RH, Score=150, Expect=2e-45]} {Smed: dd_Smed_v6_15389_0_1, dd_Smed_v6_15389_0_1, [RH, Score=117, Expect=7e-33]} {RNA1509_45337} {RNA1310_24811.1} {RNA815_15403.1}
12. MligTC455_21486 9101 189.61 Mlig455_002496, Mlig455_002671

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.261

Regeneration-upregulated BL: 1.823

Regeneration-enriched BL: 1.823

HNRNPA1 0.958 - - - - - 0.958

Mlig455_002496 {REF} {Length: 1995} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=117.6]; RNA recognition motif [PF16367.7, score=47.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=22.8]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=198, Expect=3e-61]} {Mouse: ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=187, Expect=1e-56]; ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=1e-56]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=177, Expect=3e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=180, Expect=5e-54]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=194, Expect=1e-60]} {RNA1509_12341, RNA1509_52984} {RNA1310_14034.1, RNA1509_52984} {RNA1509_52984, RNA815_4894}

Mlig455_002671 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=117.6]; RNA recognition motif [PF16367.7, score=46.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=22.9]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=202, Expect=1e-62]} {Mouse: ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=190, Expect=5e-58]; ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=189, Expect=8e-58]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=180, Expect=2e-53]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=183, Expect=3e-55]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=197, Expect=8e-62]} {RNA1509_12341, RNA1509_55688} {RNA1310_14034.1, RNA1509_55688} {RNA1509_55688, RNA815_4894}
13. MligTC455_40013 1551 32.32 Mlig455_045254, Mlig455_069174

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.916/0.00000

Regeneration-upregulated BL: 1.957

Regeneration-enriched BL: 1.957

MCM5 0.957 - - - 0.957 - -

Mlig455_045254 {REF} {Length: 2658} {Pfam: MCM P-loop domain [PF00493.25, score=329.8]; MCM OB domain [PF17207.5, score=115.3]; MCM AAA-lid domain [PF17855.3, score=92.5]; MCM N-terminal domain [PF14551.8, score=58.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=25.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=834, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726}

Mlig455_069174 {REF} {Length: 3194} {Pfam: MCM P-loop domain [PF00493.25, score=329.3]; MCM OB domain [PF17207.5, score=114.9]; MCM AAA-lid domain [PF17855.3, score=92.4]; MCM N-terminal domain [PF14551.8, score=57.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.9]; Endonuclease-reverse transcriptase [PF14529.8, score=21.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.1]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=932, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=803, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=833, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726}
14. MligTC455_25937 1835 38.22 Mlig455_009272, Mlig455_016411

Neo: -

Age: -

0.956 - - - - 0.956 -

Mlig455_009272 {REF} {Length: 7436} {TRANSSPLICED} {RNA1509_5983} {RNA1310_1641.1} {RNA815_12846.1}

Mlig455_016411 {REF} {Length: 502} {NoTransDecoderORF} {RNA1310_8260.1} {RNA815_37065}
15. MligTC455_33559 481 10.03 Mlig455_007490

Neo: Neoblast, stringent

Age: Down-Up-Down

Region-enriched R5: 1.152/0.00154

MCM3 0.955 - - - 0.955 - - Mlig455_007490 {REF} {Length: 4147} {Pfam: MCM P-loop domain [PF00493.25, score=315.6]; MCM OB domain [PF17207.5, score=111.7]; MCM AAA-lid domain [PF17855.3, score=70.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=29.7]; MCM N-terminal domain [PF14551.8, score=23.0]} {Human: ENSG00000112118, MCM3, minichromosome maintenance complex component 3, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000041859, Mcm3, minichromosome maintenance complex component 3, [RH, Score=852, Expect=0.0]} {Dmel: FBgn0284442, Mcm3, Minichromosome maintenance 3, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003155, mcm-3, DNA helicase, [RH, Score=724, Expect=0.0]} {Smed: dd_Smed_v6_6734_0_1, dd_Smed_v6_6734_0_1, [RH, Score=818, Expect=0.0]} {RNA1509_21616, RNA1509_3186} {RNA1310_2792, RNA1509_21616} {RNA1509_21616, RNA815_3149.1}
16. MligTC455_23467 529 11.02 Mlig455_014848

Neo: Neoblast, stringent

Age: -

Region-enriched R4: 2.155/0.01385
Region-enriched R5: 1.679/0.02918

AURKA 0.954 - - - 0.954 - - Mlig455_014848 {REF} {Length: 1810} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=136.7]; Kinase-like [PF14531.8, score=25.2]} {Human: ENSG00000087586, AURKA, aurora kinase A, [RH, Score=350, Expect=4e-119]; ENSG00000105146, AURKC, aurora kinase C, [RH, Score=337, Expect=2e-115]} {Mouse: ENSMUSG00000027496, Aurka, aurora kinase A, [RH, Score=352, Expect=3e-120]; ENSMUSG00000020897, Aurkb, aurora kinase B, [RH, Score=346, Expect=2e-118]} {Dmel: FBgn0000147, aurA, aurora A, [RH, Score=308, Expect=1e-102]} {Celegans: WBGene00000099, air-2, Aurora/IPL1-related protein kinase 2, [RH, Score=334, Expect=9e-115]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [RH, Score=271, Expect=2e-90]} {RNA1509_12454, RNA1509_38829, RNA1509_39385} {RNA1310_14817, RNA1509_38829, RNA1509_39385} {RNA1509_38829, RNA1509_39385, RNA815_6263}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA