TomoSeq data search

Data search

Results for MligTC455_41019

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41019

1125

23.44

Mlig455_021800

Neo: -

Age: logFC(26M/2M)=0.187

TRAK1

Mlig455_021800 {REF} {Length: 4662} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=288.6]} {Human: ENSG00000182606, TRAK1, trafficking kinesin protein 1, [RH, Score=276, Expect=6e-78]} {Mouse: ENSMUSG00000032536, Trak1, trafficking protein, kinesin binding 1, [RH, Score=277, Expect=2e-78]} {Dmel: FBgn0262872, milt, milton, [RH, Score=214, Expect=6e-57]} {Celegans: WBGene00020838, trak-1, TRAK1 and TRAK2 related, [RH, Score=84.3, Expect=1e-16]} {Smed: dd_Smed_v6_4847_0_1, dd_Smed_v6_4847_0_1, [RH, Score=268, Expect=2e-76]} {RNA1509_8774} {RNA1310_2299.2} {RNA815_2123}

Cumulative graph for MligTC455_41019

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.409	4.779	0.59539	1.00000
RegionR2	0.169	4.779	0.61925	0.96416
RegionR3	-0.098	4.779	0.73018	1.00000
RegionR4	-0.168	4.779	0.61985	0.93003
RegionR5	0.374	4.779	0.13607	0.37757
RegionR6	-0.439	4.779	0.15079	0.69270
RegionR7	-0.537	4.779	0.19553	0.80193
RegionR8	0.289	4.779	0.53356	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.48	4.779	0.00695	0.39444
RegenerationR2	0.126	4.779	0.65233	0.93724
RegenerationR3	0.181	4.779	0.56991	0.89388
RegenerationR4	0.23	4.779	0.48046	0.85867
RegenerationR5	-0.086	4.779	0.76567	0.97756
RegenerationR6	0.581	4.779	0.08172	0.35707
RegenerationBL	0.315	4.779	0.40861	0.77771
RegenerationTP	-0.586	4.779	0.20842	0.65024

Genes with expression patterns similar to MligTC455_41019

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41019	1125	23.44	Mlig455_021800	Neo: - Age: logFC(26M/2M)=0.187	TRAK1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021800 {REF} {Length: 4662} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=288.6]} {Human: ENSG00000182606, TRAK1, trafficking kinesin protein 1, [RH, Score=276, Expect=6e-78]} {Mouse: ENSMUSG00000032536, Trak1, trafficking protein, kinesin binding 1, [RH, Score=277, Expect=2e-78]} {Dmel: FBgn0262872, milt, milton, [RH, Score=214, Expect=6e-57]} {Celegans: WBGene00020838, trak-1, TRAK1 and TRAK2 related, [RH, Score=84.3, Expect=1e-16]} {Smed: dd_Smed_v6_4847_0_1, dd_Smed_v6_4847_0_1, [RH, Score=268, Expect=2e-76]} {RNA1509_8774} {RNA1310_2299.2} {RNA815_2123}
2.	MligTC455_27582	587	12.23	Mlig455_020527	Neo: - Age: -		2.676	-	-	0.850	0.870	0.956	-	Mlig455_020527 {REF} {Length: 1858} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1772) [PF08592.13, score=19.9]} {RNA1509_48081} {RNA1310_6782.1, RNA1509_48081} {RNA1509_48081, RNA815_4292}
3.	MligTC455_16354	819	17.05	Mlig455_046738, Mlig455_046828	Neo: Irradiation Age: Up-Down-Down Regeneration-downregulated TP: -2.365 Regeneration-depleted TP: -2.365	RPS6KA1	1.798	-	-	-	-	0.840	0.958	Mlig455_046738 {REF} {Length: 889} {Pfam: Protein kinase domain [PF00069.27, score=58.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=30.0]} {Human: ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=168, Expect=9e-49]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=167, Expect=3e-48]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=166, Expect=6e-48]} {Mouse: ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=170, Expect=1e-49]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=167, Expect=2e-48]; ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=166, Expect=5e-48]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]} {Dmel: FBgn0262866, S6kII, Ribosomal protein S6 kinase II, [Score=156, Expect=2e-44]} {Celegans: WBGene00011352, rskn-1, Putative ribosomal protein S6 kinase alpha-1, [Score=170, Expect=7e-50]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=154, Expect=3e-44]} {RNA1509_13802} {RNA1310_6706.1} {RNA815_5503} Mlig455_046828 {REF} {Length: 9072} {RNA1509_13802, RNA1509_34330} {RNA1310_6706.1, RNA1509_13802, RNA1509_34330} {RNA1509_13802, RNA1509_34330, RNA815_5503}
4.	MligTC455_39523	2843	59.24	Mlig455_043149	Neo: - Age: logFC(26M/2M)=0.206	CAPN3	1.76	-	-	-	0.806	0.954	-	Mlig455_043149 {REF} {Length: 3498} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=421.5]; Calpain large subunit, domain III [PF01067.24, score=157.4]; EF hand [PF00036.34, score=41.0]; EF-hand domain [PF13405.8, score=32.1]; EF-hand domain pair [PF13833.8, score=23.4]; EF-hand domain pair [PF13499.8, score=22.3]; EF hand [PF13202.8, score=19.0]} {Human: ENSG00000092529, CAPN3, calpain 3, [RH, Score=654, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [RH, Score=650, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [RH, Score=625, Expect=0.0]} {Dmel: FBgn0025866, CalpB, Calpain-B, [RH, Score=723, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [RH, Score=505, Expect=4e-169]} {Smed: dd_Smed_v6_1752_0_3, dd_Smed_v6_1752_0_3, [RH, Score=974, Expect=0.0]} {RNA1509_1861, RNA1509_31038} {RNA1310_10875, RNA1509_31038} {RNA1509_31038, RNA815_1008.1}
5.	MligTC455_52912	1145	23.85	Mlig455_021597	Neo: - Age: - Region-enriched R6: 1.858/0.01484	TDG	1.723	-	0.773	-	-	0.950	-	Mlig455_021597 {REF} {Length: 4885} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=67.6]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [RH, Score=214, Expect=6e-61]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [RH, Score=212, Expect=3e-60]} {Dmel: FBgn0026869, Thd1, [RH, Score=271, Expect=2e-75]} {Smed: dd_Smed_v6_9424_0_1, dd_Smed_v6_9424_0_1, [RH, Score=363, Expect=9e-115]} {RNA1509_13022, RNA1509_50618} {RNA1310_1307, RNA1509_13022} {RNA1509_13022, RNA815_4384}
6.	MligTC455_27029	560	11.67	Mlig455_007012, Mlig455_028617	Neo: - Age: - Region-enriched R4: 1.111/0.04532		1.718	-	-	0.960	-	-	0.758	Mlig455_007012 {REF} {Length: 347} {RNA1509_25982} {RNA1310_586.1} {RNA815_52501} Mlig455_028617 {REF} {Length: 5161} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.2}
7.	MligTC455_49431	1241	25.84	Mlig455_051496, Mlig455_051534	Neo: - Age: logFC(26M/2M)=0.325	IDE	1.69	0.737	-	0.953	-	-	-	Mlig455_051496 {REF} {Length: 3313} {TRANSSPLICED} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=219.3]; Insulinase (Peptidase family M16) [PF00675.22, score=124.5]; Peptidase M16 inactive domain [PF05193.23, score=73.3]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=639, Expect=0.0]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=636, Expect=0.0]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=636, Expect=0.0]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=624, Expect=0.0]} {Celegans: WBGene00018426, F44E7.4, [Score=504, Expect=1e-161]} {Smed: dd_Smed_v6_9500_1_1, dd_Smed_v6_9500_1_1, [Score=545, Expect=7e-178]} {RNA1509_42817} {RNA1310_5752} {RNA815_4207} Mlig455_051534 {REF} {Length: 3350} {TRANSSPLICED} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=218.1]; Insulinase (Peptidase family M16) [PF00675.22, score=124.5]; Peptidase M16 inactive domain [PF05193.23, score=74.0]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=648, Expect=0.0]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=643, Expect=0.0]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=643, Expect=0.0]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=627, Expect=0.0]} {Celegans: WBGene00018426, F44E7.4, [Score=517, Expect=1e-166]} {Smed: dd_Smed_v6_9500_1_1, dd_Smed_v6_9500_1_1, [Score=555, Expect=0.0]} {RNA1509_42817, RNA1509_52505} {RNA1310_5752, RNA1509_52505} {RNA1509_52505, RNA815_4207}
8.	MligTC455_35122	475	9.9	Mlig455_043580	Neo: - Age: - Region-enriched R4: 1.852/0.04633		1.663	-	0.713	-	-	-	0.950	Mlig455_043580 {REF} {Length: 6482} {Pfam: Tudor domain [PF00567.26, score=32.4]} {RNA1509_10065, RNA1509_19843, RNA1509_37207} {RNA1310_3858.1, RNA1509_10065, RNA1509_19843, RNA1509_37207} {RNA1509_10065, RNA1509_19843, RNA1509_37207, RNA815_1446}
9.	MligTC455_43773	671	13.98	Mlig455_004354	Neo: - Age: Up-Down-Down Region-enriched R4: 2.398/0.00965	SPAG1	0.968	-	-	-	-	-	0.968	Mlig455_004354 {REF} {Length: 3601} {TRANSSPLICED} {Pfam: Potential Monad-binding region of RPAP3 [PF13877.8, score=56.8]; Tetratricopeptide repeat [PF07719.19, score=46.7]; Tetratricopeptide repeat [PF00515.30, score=45.6]; Tetratricopeptide repeat [PF13431.8, score=34.4]; TPR repeat [PF13414.8, score=31.4]; Tetratricopeptide repeat [PF14559.8, score=31.0]; Tetratricopeptide repeat [PF13181.8, score=22.9]; Tetratricopeptide repeat [PF13371.8, score=22.2]; Tetratricopeptide repeat [PF13428.8, score=20.1]} {Human: ENSG00000104450, SPAG1, sperm associated antigen 1, [Score=90.5, Expect=2e-18]} {Mouse: ENSMUSG00000022466, Rpap3, RNA polymerase II associated protein 3, [Score=80.5, Expect=2e-15]; ENSMUSG00000037617, Spag1, sperm associated antigen 1, [Score=77.4, Expect=2e-14]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=68.9, Expect=4e-12]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [Score=70.9, Expect=5e-13]} {RNA1509_17515} {RNA1310_5355} {RNA815_5507}
10.	MligTC455_33543	280	5.82	Mlig455_023889	Neo: - Age: logFC(26M/2M)=-0.218	ANK3	0.957	-	-	-	-	0.957	-	Mlig455_023889 {REF} {Length: 6375} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=468.6]; Ankyrin repeats (many copies) [PF13637.8, score=413.4]; Ankyrin repeat [PF13606.8, score=356.0]; Ankyrin repeat [PF00023.32, score=339.0]; Ankyrin repeats (many copies) [PF13857.8, score=328.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=271, Expect=3e-73]; ENSG00000029534, ANK1, ankyrin 1, [Score=269, Expect=6e-73]; ENSG00000145362, ANK2, ankyrin 2, [Score=262, Expect=2e-70]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=260, Expect=2e-71]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=256, Expect=9e-69]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=268, Expect=1e-72]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=253, Expect=2e-69]} {Smed: dd_Smed_v6_13156_0_1, dd_Smed_v6_13156_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_11632, RNA1509_45311, RNA1509_59490} {RNA1310_2064, RNA1509_45311, RNA1509_59490} {RNA1509_45311, RNA1509_59490, RNA815_679.1}
11.	MligTC455_43441	981	20.44	Mlig455_030636, Mlig455_031007	Neo: Int S/G2/M Age: -		0.957	-	-	-	-	-	0.957	Mlig455_030636 {REF} {Length: 1690} {TRANSSPLICED} {RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1310_18465, RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1509_19913, RNA1509_42652, RNA1509_43735, RNA815_7582} Mlig455_031007 {REF} {Length: 1871} {TRANSSPLICED} {RNA1509_42652} {RNA1310_18465} {RNA815_7582}
12.	MligTC455_34354	1250	26.04	Mlig455_041299, Mlig455_056201	Neo: - Age: - Regeneration-downregulated BL: -2.125 Regeneration-depleted BL: -2.125	DYNLRB2	0.956	-	-	0.956	-	-	-	Mlig455_041299 {REF} {Length: 5797} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728, RNA1509_41581} {RNA1310_30473, RNA1509_41581} {RNA1509_41581, RNA815_14022} Mlig455_056201 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728} {RNA1310_30473, RNA1509_28728} {RNA1509_28728, RNA815_14022}
13.	MligTC455_33664	285	5.95	Mlig455_070034	Neo: - Age: -	ADRA1A	0.954	-	-	0.954	-	-	-	Mlig455_070034 {REF} {Length: 2855} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=104.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=21.3]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=85.1, Expect=5e-17]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=82.4, Expect=5e-16]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=83.2, Expect=2e-16]} {Dmel: FBgn0025631, moody, [Score=89.0, Expect=2e-18]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.6, Expect=5e-10]} {Smed: dd_Smed_v6_54079_0_1, dd_Smed_v6_54079_0_1, [Score=69.7, Expect=9e-13]} {RNA1509_25254} {RNA1310_23746} {RNA815_34946}
14.	MligTC455_16430	401	8.36	Mlig455_034784	Neo: - Age: logFC(26M/2M)=-0.294		0.952	-	-	-	-	0.952	-	Mlig455_034784 {REF} {Length: 2260} {Dmel: FBgn0033661, CG13185, [Score=62.8, Expect=6e-10]} {RNA1509_11490} {RNA1310_53140} {RNA815_7177}
15.	MligTC455_50154	1013	21.11	Mlig455_062175, Mlig455_062207	Neo: - Age: - Region-enriched R5: 1.772/0.00870 Regeneration-upregulated BL: 1.960 Regeneration-enriched BL: 1.960	POU6F2	0.952	-	-	-	-	-	0.952	Mlig455_062175 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=89.0]; Homeodomain [PF00046.31, score=61.4]} {Human: ENSG00000106536, POU6F2, POU class 6 homeobox 2, [Score=161, Expect=5e-42]} {Mouse: ENSMUSG00000009734, Pou6f2, POU domain, class 6, transcription factor 2, [Score=161, Expect=1e-42]} {Dmel: FBgn0261588, pdm3, pou domain motif 3, [Score=126, Expect=2e-30]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=109, Expect=3e-25]} {Smed: dd_Smed_v6_13010_0_1, dd_Smed_v6_13010_0_1, [Score=130, Expect=2e-32]} {RNA1509_33080, RNA1509_36081} {RNA1310_10551.1, RNA1509_33080, RNA1509_36081} {RNA1509_33080, RNA1509_36081, RNA815_8676} Mlig455_062207 {REF} {Length: 3563} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=89.0]; Homeodomain [PF00046.31, score=59.8]; Helix-turn-helix domain [PF13560.8, score=19.1]} {Human: ENSG00000106536, POU6F2, POU class 6 homeobox 2, [Score=159, Expect=1e-41]} {Mouse: ENSMUSG00000009734, Pou6f2, POU domain, class 6, transcription factor 2, [Score=159, Expect=7e-42]} {Dmel: FBgn0261588, pdm3, pou domain motif 3, [Score=125, Expect=7e-30]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=107, Expect=1e-24]} {Smed: dd_Smed_v6_13010_0_1, dd_Smed_v6_13010_0_1, [Score=130, Expect=2e-32]} {RNA1509_33080} {RNA1310_10551.1} {RNA815_8676}
16.	MligTC455_35121	422	8.79	Mlig455_043431	Neo: - Age: - Region-enriched R4: 2.174/0.01451		0.951	-	-	-	-	-	0.951	Mlig455_043431 {REF} {Length: 6133} {RNA1509_10065, RNA1509_32108, RNA1509_51778, RNA1509_54811} {RNA1310_3858.1, RNA1509_32108, RNA1509_51778, RNA1509_54811} {RNA1509_32108, RNA1509_51778, RNA1509_54811, RNA815_1876}
17.	MligTC455_13301	210	4.37	Mlig455_001355, Mlig455_053023	Neo: - Age: logFC(26M/2M)=-1.502		0.95	-	-	-	-	0.950	-	Mlig455_001355 {REF} {Length: 7813} {Pfam: Retrotransposon gag protein [PF03732.19, score=22.4]} {RNA1509_16532, RNA1509_28937} {RNA1310_1043, RNA1509_16532, RNA1509_28937} {RNA1509_16532, RNA1509_28937, RNA815_6984} Mlig455_053023 {REF} {Length: 3754} {Pfam: TatD related DNase [PF01026.23, score=22.3]} {RNA1509_28937} {RNA1310_4063.1} {RNA815_6984}

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