Data search
Results for MligTC455_41020
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41020 | 603 | 12.57 | Mlig455_032493 | Neo: - Age: Up-Down-Down |
SGSM1 | Mlig455_032493 {REF} {Length: 5426} {Pfam: Rab-binding domain (RBD) [PF12068.10, score=113.2]; Rab-GTPase-TBC domain [PF00566.20, score=99.4]; RUN domain [PF02759.21, score=68.0]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=369, Expect=4e-109]} {Mouse: ENSMUSG00000038351, Sgsm2, small G protein signaling modulator 2, [Score=464, Expect=3e-145]} {Dmel: FBgn0052506, CG32506, [Score=283, Expect=1e-78]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=214, Expect=3e-58]} {Smed: dd_Smed_v6_3307_0_1, dd_Smed_v6_3307_0_1, [Score=394, Expect=7e-119]} {RNA1509_23023} {RNA1310_13249.1} {RNA815_3765} |
Cumulative graph for MligTC455_41020
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.326 | 3.931 | 0.08689 | 0.63793 | |
| RegionR2 | 1.502 | 3.931 | 0.02903 | 0.19245 | |
| RegionR3 | 0.446 | 3.931 | 0.59719 | 1.00000 | |
| RegionR4 | 1.056 | 3.931 | 0.18323 | 0.45478 | |
| RegionR5 | 0.041 | 3.931 | 0.83186 | 1.00000 | |
| RegionR6 | 0.614 | 3.931 | 0.46551 | 1.00000 | |
| RegionR7 | 1.306 | 3.931 | 0.09466 | 0.58857 | |
| RegionR8 | 1.361 | 3.931 | 0.14456 | 0.69355 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.723 | 3.931 | 0.08207 | 0.78003 | |
| RegenerationR2 | -0.365 | 3.931 | 0.29574 | 0.73818 | |
| RegenerationR3 | 0.2 | 3.931 | 0.64538 | 0.92682 | |
| RegenerationR4 | -0.442 | 3.931 | 0.31523 | 0.75476 | |
| RegenerationR5 | 0.122 | 3.931 | 0.77003 | 0.97898 | |
| RegenerationR6 | 0.317 | 3.931 | 0.46904 | 0.78388 | |
| RegenerationBL | 0.051 | 3.931 | 0.91662 | 1.00000 | |
| RegenerationTP | -0.397 | 3.931 | 0.46659 | 0.87849 |
Genes with expression patterns similar to MligTC455_41020
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41020 | 603 | 12.57 | Mlig455_032493 | Neo: - Age: Up-Down-Down |
SGSM1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032493 {REF} {Length: 5426} {Pfam: Rab-binding domain (RBD) [PF12068.10, score=113.2]; Rab-GTPase-TBC domain [PF00566.20, score=99.4]; RUN domain [PF02759.21, score=68.0]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=369, Expect=4e-109]} {Mouse: ENSMUSG00000038351, Sgsm2, small G protein signaling modulator 2, [Score=464, Expect=3e-145]} {Dmel: FBgn0052506, CG32506, [Score=283, Expect=1e-78]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=214, Expect=3e-58]} {Smed: dd_Smed_v6_3307_0_1, dd_Smed_v6_3307_0_1, [Score=394, Expect=7e-119]} {RNA1509_23023} {RNA1310_13249.1} {RNA815_3765} |
| 2. | MligTC455_33675 | 223 | 4.64 | Mlig455_053356 | Neo: - Age: - |
DMD | 0.968 | - | - | - | 0.968 | - | - | Mlig455_053356 {REF} {Length: 7940} {Pfam: EF-hand [PF09069.13, score=97.7]; EF hand [PF09068.13, score=83.1]; Zinc finger, ZZ type [PF00569.19, score=41.3]} {Human: ENSG00000198947, DMD, dystrophin, [Score=382, Expect=8e-107]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=382, Expect=9e-107]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=343, Expect=1e-96]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=285, Expect=6e-77]} {Smed: dd_Smed_v6_5325_0_3, dd_Smed_v6_5325_0_3, [Score=226, Expect=4e-59]} {RNA1509_19045} {RNA1310_18748, RNA1509_19045} {RNA1509_19045, RNA815_16702} |
| 3. | MligTC455_42699 | 1094 | 22.78 | Mlig455_014358 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.568 Region-enriched R2: 1.315/0.02072 |
YWHAE | 0.963 | - | - | - | 0.963 | - | - | Mlig455_014358 {REF} {Length: 1925} {Pfam: 14-3-3 protein [PF00244.22, score=229.3]} {Human: ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=275, Expect=3e-93]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=275, Expect=3e-93]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [Score=275, Expect=2e-93]} {Dmel: FBgn0020238, 14-3-3epsilon, [Score=260, Expect=7e-88]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=208, Expect=1e-67]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [Score=248, Expect=3e-83]} {RNA1509_43335} {RNA1310_15023.1} {RNA815_5579} |
| 4. | MligTC455_53842 | 1222 | 25.46 | Mlig455_023890 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.345 Region-enriched R2: 1.546/0.01667 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_023890 {REF} {Length: 1336} {RNA1509_15580} {RNA1310_22487.1} {RNA815_10676.1} | |
| 5. | MligTC455_50343 | 155 | 3.22 | Mlig455_047080 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_047080 {REF} {Length: 6752} {Pfam: PDZ domain [PF00595.26, score=42.4]; PDZ domain [PF17820.3, score=37.6]; PDZ domain [PF13180.8, score=24.0]} {Smed: dd_Smed_v6_13914_0_1, dd_Smed_v6_13914_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_8324} {RNA1310_1252.1} {RNA815_1215} | |
| 6. | MligTC455_46722 | 205 | 4.28 | Mlig455_028319 | Neo: - Age: - |
CHRNA3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_028319 {REF} {Length: 2247} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=276.5]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=220.5]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=421, Expect=1e-142]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=412, Expect=2e-138]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=408, Expect=2e-137]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=403, Expect=1e-135]} {Mouse: ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [RH, Score=407, Expect=4e-137]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=504, Expect=2e-175]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=432, Expect=5e-147]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [Score=476, Expect=3e-163]} {RNA1509_55012} {RNA1310_6313.1} {RNA815_3014.1} |
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