Data search
Results for MligTC455_41124
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41124 | 2456 | 51.16 | Mlig455_068896 | Neo: Int S/G2/M Age: Down-Up-Down |
ZNF593 | Mlig455_068896 {REF} {Length: 1491} {TRANSSPLICED} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=32.6]} {Human: ENSG00000142684, ZNF593, zinc finger protein 593, [RH, Score=70.5, Expect=1e-15]} {Mouse: ENSMUSG00000028840, Zfp593, zinc finger protein 593, [RH, Score=72.4, Expect=1e-16]} {Dmel: FBgn0029885, CG3224, [RH, Score=69.3, Expect=2e-15]} {Celegans: WBGene00013236, Y56A3A.18, Zinc finger protein 593 homolog, [RH, Score=103, Expect=4e-29]} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1310_46284, RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140, RNA815_26064} |
Cumulative graph for MligTC455_41124
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.024 | 5.834 | 0.12274 | 0.71667 | |
| RegionR2 | 0.376 | 5.834 | 0.30285 | 0.69294 | |
| RegionR3 | 0.834 | 5.834 | 0.00451 | 0.08877 | |
| RegionR4 | 0.149 | 5.834 | 0.65949 | 0.95958 | |
| RegionR5 | 0.225 | 5.834 | 0.42818 | 0.78815 | |
| RegionR6 | 0.173 | 5.834 | 0.57128 | 1.00000 | |
| RegionR7 | -0.375 | 5.834 | 0.29852 | 0.93318 | |
| RegionR8 | -0.358 | 5.834 | 0.39820 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.308 | 5.834 | 0.73588 | 1.00000 | |
| RegenerationR2 | -0.242 | 5.834 | 0.49850 | 0.87092 | |
| RegenerationR3 | -0.354 | 5.834 | 0.33397 | 0.75910 | |
| RegenerationR4 | 0.345 | 5.834 | 0.36282 | 0.78844 | |
| RegenerationR5 | -0.099 | 5.834 | 0.78344 | 0.98262 | |
| RegenerationR6 | 0.306 | 5.834 | 0.41208 | 0.74542 | |
| RegenerationBL | -0.056 | 5.834 | 0.88661 | 1.00000 | |
| RegenerationTP | 0.083 | 5.834 | 0.84566 | 1.00000 |
Genes with expression patterns similar to MligTC455_41124
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41124 | 2456 | 51.16 | Mlig455_068896 | Neo: Int S/G2/M Age: Down-Up-Down |
ZNF593 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068896 {REF} {Length: 1491} {TRANSSPLICED} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=32.6]} {Human: ENSG00000142684, ZNF593, zinc finger protein 593, [RH, Score=70.5, Expect=1e-15]} {Mouse: ENSMUSG00000028840, Zfp593, zinc finger protein 593, [RH, Score=72.4, Expect=1e-16]} {Dmel: FBgn0029885, CG3224, [RH, Score=69.3, Expect=2e-15]} {Celegans: WBGene00013236, Y56A3A.18, Zinc finger protein 593 homolog, [RH, Score=103, Expect=4e-29]} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1310_46284, RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140, RNA815_26064} |
| 2. | MligTC455_39620 | 2299 | 47.89 | Mlig455_061227 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.340 |
RBM34 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_061227 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.2]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=167, Expect=2e-47]} {Dmel: FBgn0032620, CG12288, [RH, Score=97.1, Expect=5e-22]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=110, Expect=9e-27]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [RH, Score=122, Expect=1e-31]} {RNA1509_8606} {RNA1310_27944.1} {RNA815_12068} |
| 3. | MligTC455_23713 | 1426 | 29.71 | Mlig455_039709, Mlig455_039765 | Neo: - Age: - Region-enriched R4: 1.623/0.02660 Regeneration-enriched TP: 3.424 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_039709 {REF} {Length: 567} {NoTransDecoderORF} {RNA1310_62489} {RNA815_53974} Mlig455_039765 {REF} {Length: 1929} {TRANSSPLICED} {Pfam: NADH-ubiquinone reductase complex 1 MLRQ subunit [PF06522.13, score=24.3]} {RNA1509_10679, RNA1509_12500, RNA1509_25114, RNA1509_41453, RNA1509_43447, RNA1509_44272} {RNA1310_33740, RNA1509_10679, RNA1509_12500, RNA1509_25114, RNA1509_41453, RNA1509_43447, RNA1509_44272} {RNA1509_10679, RNA1509_12500, RNA1509_25114, RNA1509_41453, RNA1509_43447, RNA1509_44272, RNA815_17902.1} |
Berezikov Lab - 2020-2021 © ERIBA