Data search
Results for MligTC455_39620
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39620 | 2299 | 47.89 | Mlig455_061227 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.340 |
RBM34 | Mlig455_061227 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.2]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=167, Expect=2e-47]} {Dmel: FBgn0032620, CG12288, [RH, Score=97.1, Expect=5e-22]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=110, Expect=9e-27]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [RH, Score=122, Expect=1e-31]} {RNA1509_8606} {RNA1310_27944.1} {RNA815_12068} |
Cumulative graph for MligTC455_39620
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.166 | 5.748 | 0.01096 | 0.30492 | |
| RegionR2 | -0.437 | 5.748 | 0.26508 | 0.64715 | |
| RegionR3 | 0.826 | 5.748 | 0.00668 | 0.11606 | |
| RegionR4 | 0.654 | 5.748 | 0.06124 | 0.22130 | |
| RegionR5 | 0.781 | 5.748 | 0.00662 | 0.04283 | |
| RegionR6 | 0.235 | 5.748 | 0.45971 | 1.00000 | |
| RegionR7 | 0.387 | 5.748 | 0.26980 | 0.90123 | |
| RegionR8 | -0.28 | 5.748 | 0.53921 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.737 | 5.748 | 0.55429 | 1.00000 | |
| RegenerationR2 | 0.288 | 5.748 | 0.41492 | 0.82383 | |
| RegenerationR3 | -0.201 | 5.748 | 0.57096 | 0.89448 | |
| RegenerationR4 | 0.163 | 5.748 | 0.66015 | 0.93815 | |
| RegenerationR5 | -0.139 | 5.748 | 0.68356 | 0.94495 | |
| RegenerationR6 | 0.481 | 5.748 | 0.18883 | 0.52630 | |
| RegenerationBL | -0.599 | 5.748 | 0.13172 | 0.43275 | |
| RegenerationTP | 0.048 | 5.748 | 0.90628 | 1.00000 |
Genes with expression patterns similar to MligTC455_39620
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39620 | 2299 | 47.89 | Mlig455_061227 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.340 |
RBM34 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061227 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.2]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=167, Expect=2e-47]} {Dmel: FBgn0032620, CG12288, [RH, Score=97.1, Expect=5e-22]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=110, Expect=9e-27]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [RH, Score=122, Expect=1e-31]} {RNA1509_8606} {RNA1310_27944.1} {RNA815_12068} |
| 2. | MligTC455_39619 | 1987 | 41.4 | Mlig455_006330 | Neo: Int S/G2/M Age: - |
RBM34 | 5.689 | 0.997 | 0.999 | 0.995 | 0.995 | 0.969 | 0.734 | Mlig455_006330 {REF} {Length: 4267} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=141.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=86.1]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [Score=177, Expect=2e-47]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=166, Expect=1e-43]} {Dmel: FBgn0032620, CG12288, [Score=92.4, Expect=4e-19]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [Score=119, Expect=2e-28]} {RNA1509_20291} {RNA1310_3668.1} {RNA815_2487.1} |
| 3. | MligTC455_33790 | 936 | 19.5 | Mlig455_029354 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.333 |
URB1 | 2.478 | - | - | - | 0.954 | 0.788 | 0.736 | Mlig455_029354 {REF} {Length: 3970} {TRANSSPLICED} {Pfam: Nucleolar pre-ribosomal-associated protein 1 [PF16201.7, score=127.7]; Ribosome 60S biogenesis N-terminal [PF11707.10, score=110.2]; C2H2-type zinc finger [PF13894.8, score=33.2]; Zinc-finger double domain [PF13465.8, score=33.1]; Zinc finger, C2H2 type [PF00096.28, score=27.3]} {Human: ENSG00000142207, URB1, URB1 ribosome biogenesis 1 homolog (S. cerevisiae), [RH, Score=135, Expect=4e-31]} {Mouse: ENSMUSG00000039929, Urb1, URB1 ribosome biogenesis 1 homolog (S. cerevisiae), [RH, Score=136, Expect=1e-31]} {Dmel: FBgn0031610, CG15436, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=72.4, Expect=8e-14]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=80.5, Expect=1e-15]} {RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245} {RNA1310_3587, RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245} {RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245, RNA815_1662} |
| 4. | MligTC455_46816 | 1372 | 28.59 | Mlig455_005289 | Neo: - Age: logFC(26M/2M)=0.424 |
GMPR2 | 1.693 | - | - | - | - | 0.963 | 0.730 | Mlig455_005289 {REF} {Length: 1614} {TRANSSPLICED} {Pfam: IMP dehydrogenase / GMP reductase domain [PF00478.27, score=266.3]; FMN-dependent dehydrogenase [PF01070.20, score=21.1]} {Human: ENSG00000284752, GMPR2, guanosine monophosphate reductase 2, [RH, Score=550, Expect=0.0]; ENSG00000100938, GMPR2, guanosine monophosphate reductase 2, [RH, Score=550, Expect=0.0]; ENSG00000137198, GMPR, guanosine monophosphate reductase, [RH, Score=543, Expect=0.0]} {Mouse: ENSMUSG00000000253, Gmpr, guanosine monophosphate reductase, [RH, Score=547, Expect=0.0]; ENSMUSG00000002326, Gmpr2, guanosine monophosphate reductase 2, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00017984, F32D1.5, GMP reductase, [RH, Score=527, Expect=0.0]} {RNA1509_9539} {RNA1310_11305.1, RNA1509_9539} {RNA1509_9539, RNA815_7734} |
| 5. | MligTC455_41408 | 1177 | 24.52 | Mlig455_020493 | Neo: - Age: Down-Up-Up |
0.961 | - | - | - | 0.961 | - | - | Mlig455_020493 {REF} {Length: 3513} {RNA1509_11871, RNA1509_30407} {RNA1310_5093, RNA1509_30407} {RNA1509_30407, RNA815_7109} | |
| 6. | MligTC455_20448 | 1045 | 21.77 | Mlig455_053753 | Neo: - |
SLC2A3 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_053753 {REF} {Length: 2905} {Pfam: Sugar (and other) transporter [PF00083.26, score=370.8]; Major Facilitator Superfamily [PF07690.18, score=76.6]} {Human: ENSG00000059804, SLC2A3, solute carrier family 2 member 3, [RH, Score=352, Expect=1e-115]; ENSG00000117394, SLC2A1, solute carrier family 2 member 1, [RH, Score=347, Expect=6e-114]; ENSG00000173262, SLC2A14, solute carrier family 2 member 14, [RH, Score=344, Expect=1e-112]} {Mouse: ENSMUSG00000028645, Slc2a1, solute carrier family 2 (facilitated glucose transporter), member 1, [RH, Score=346, Expect=1e-113]} {Dmel: FBgn0264574, Glut1, Glucose transporter 1, [RH, Score=412, Expect=1e-135]} {Celegans: WBGene00019207, fgt-1, Facilitated glucose transporter protein 1, [RH, Score=293, Expect=2e-93]} {Smed: dd_Smed_v6_8244_0_1, dd_Smed_v6_8244_0_1, [RH, Score=394, Expect=2e-132]} {RNA1509_24277, RNA1509_44652, RNA1509_45890} {RNA1310_5985.1, RNA1509_24277, RNA1509_44652, RNA1509_45890} {RNA1509_24277, RNA1509_44652, RNA1509_45890, RNA815_5376} |
| 7. | MligTC455_28167 | 889 | 18.53 | Mlig455_041562 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.271 Region-enriched R5: 1.459/0.00003 |
DDX60 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_041562 {REF} {Length: 6838} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=61.6]; Type III restriction enzyme, res subunit [PF04851.17, score=45.6]; Helicase conserved C-terminal domain [PF00271.33, score=33.2]; Zinc finger, ZZ type [PF00569.19, score=25.6]} {Human: ENSG00000137628, DDX60, DExD/H-box helicase 60, [RH, Score=639, Expect=0.0]} {Mouse: ENSMUSG00000037921, Ddx60, DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, [RH, Score=618, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [Score=84.7, Expect=5e-16]} {Celegans: WBGene00016194, C28H8.3, Uncharacterized helicase C28H8.3, [RH, Score=403, Expect=6e-116]} {Smed: dd_Smed_v6_10069_0_1, dd_Smed_v6_10069_0_1, [Score=84.7, Expect=3e-16]} {RNA1509_25102, RNA1509_2815} {RNA1310_707, RNA1509_25102, RNA1509_2815} {RNA1509_25102, RNA1509_2815, RNA815_269.1} |
| 8. | MligTC455_43965 | 1870 | 38.96 | Mlig455_042381 | Neo: - Age: - Region-enriched R5: 1.161/0.00002 |
EMC10 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_042381 {REF} {Length: 887} {TRANSSPLICED} {Human: ENSG00000161671, EMC10, ER membrane protein complex subunit 10, [RH, Score=74.7, Expect=5e-15]} {Mouse: ENSMUSG00000008140, Emc10, ER membrane protein complex subunit 10, [RH, Score=77.8, Expect=1e-16]} {Dmel: FBgn0052441, CG32441, [RH, Score=62.4, Expect=2e-11]} {Celegans: WBGene00012829, Y43F8C.7, [RH, Score=62.4, Expect=1e-11]} {Smed: dd_Smed_v6_2594_0_1, dd_Smed_v6_2594_0_1, [RH, Score=88.6, Expect=2e-21]} {RNA1509_59150} {RNA1310_12677} {RNA815_13374} |
| 9. | MligTC455_41124 | 2456 | 51.16 | Mlig455_068896 | Neo: Int S/G2/M Age: Down-Up-Down |
ZNF593 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_068896 {REF} {Length: 1491} {TRANSSPLICED} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=32.6]} {Human: ENSG00000142684, ZNF593, zinc finger protein 593, [RH, Score=70.5, Expect=1e-15]} {Mouse: ENSMUSG00000028840, Zfp593, zinc finger protein 593, [RH, Score=72.4, Expect=1e-16]} {Dmel: FBgn0029885, CG3224, [RH, Score=69.3, Expect=2e-15]} {Celegans: WBGene00013236, Y56A3A.18, Zinc finger protein 593 homolog, [RH, Score=103, Expect=4e-29]} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1310_46284, RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140} {RNA1509_12625, RNA1509_3420, RNA1509_38328, RNA1509_52140, RNA815_26064} |
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