TomoSeq data search

Data search

Results for MligTC455_41240

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41240	948	19.74	Mlig455_046519	Neo: - Age: -	CHRNA10	Mlig455_046519 {REF} {Length: 3170} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=138.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=67.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=172, Expect=3e-48]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=169, Expect=8e-47]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=164, Expect=3e-45]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=174, Expect=2e-49]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=171, Expect=5e-48]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=169, Expect=3e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=166, Expect=6e-46]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=176, Expect=6e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=317, Expect=1e-104]} {RNA1509_9446} {RNA1310_20858, RNA1509_9446} {RNA1509_9446, RNA815_4846}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41240

948

19.74

Mlig455_046519

Neo: -

Age: -

CHRNA10

Mlig455_046519 {REF} {Length: 3170} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=138.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=67.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=172, Expect=3e-48]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=169, Expect=8e-47]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=164, Expect=3e-45]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=174, Expect=2e-49]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=171, Expect=5e-48]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=169, Expect=3e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=166, Expect=6e-46]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=176, Expect=6e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=317, Expect=1e-104]} {RNA1509_9446} {RNA1310_20858, RNA1509_9446} {RNA1509_9446, RNA815_4846}

Cumulative graph for MligTC455_41240

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.103	4.53	0.19809	0.83383
RegionR2	0.186	4.53	0.59663	0.94820
RegionR3	-0.09	4.53	0.76470	1.00000
RegionR4	0.597	4.53	0.07267	0.24841
RegionR5	0.736	4.53	0.00420	0.03038
RegionR6	0.484	4.53	0.09539	0.56730
RegionR7	-0.898	4.53	0.03795	0.37319
RegionR8	0.089	4.53	0.84081	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.01	4.53	0.99398	1.00000
RegenerationR2	-0.063	4.53	0.82423	0.99586
RegenerationR3	0.055	4.53	0.86725	1.00000
RegenerationR4	-0.446	4.53	0.17177	0.60880
RegenerationR5	-0.562	4.53	0.05480	0.37577
RegenerationR6	-0.825	4.53	0.01605	0.15681
RegenerationBL	-1.494	4.53	0.00390	0.05577
RegenerationTP	0.136	4.53	0.75908	1.00000

Genes with expression patterns similar to MligTC455_41240

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41240	948	19.74	Mlig455_046519	Neo: - Age: -	CHRNA10	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046519 {REF} {Length: 3170} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=138.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=67.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=172, Expect=3e-48]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=169, Expect=8e-47]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=164, Expect=3e-45]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=174, Expect=2e-49]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=171, Expect=5e-48]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=169, Expect=3e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=166, Expect=6e-46]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=176, Expect=6e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=317, Expect=1e-104]} {RNA1509_9446} {RNA1310_20858, RNA1509_9446} {RNA1509_9446, RNA815_4846}
2.	MligTC455_18272	1198	24.97	Mlig455_027206, Mlig455_050662	Neo: - Age: -	CUL5	1.777	-	-	-	0.955	0.822	-	Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1} Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41240

948

19.74

Mlig455_046519

Neo: -

Age: -

CHRNA10

1.000

MligTC455_18272

1198

24.97

Mlig455_027206, Mlig455_050662

Neo: -

Age: -

CUL5

1.777

0.955

0.822

Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1}

Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1}