TomoSeq data search

Data search

Results for MligTC455_18272

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18272	1198	24.97	Mlig455_027206, Mlig455_050662	Neo: - Age: -	CUL5	Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1} Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18272

1198

24.97

Mlig455_027206, Mlig455_050662

Neo: -

Age: -

CUL5

Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1}

Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1}

Cumulative graph for MligTC455_18272

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.445	4.875	0.14564	0.75855
RegionR2	0.068	4.875	0.87325	1.00000
RegionR3	0.422	4.875	0.22346	0.76493
RegionR4	0.432	4.875	0.30252	0.61566
RegionR5	0.673	4.875	0.03985	0.15900
RegionR6	-0.075	4.875	0.83952	1.00000
RegionR7	0.252	4.875	0.53944	1.00000
RegionR8	-0.328	4.875	0.52483	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.205	4.875	0.33978	1.00000
RegenerationR2	0.532	4.875	0.15792	0.59456
RegenerationR3	-0.301	4.875	0.46761	0.84230
RegenerationR4	-0.046	4.875	0.91251	1.00000
RegenerationR5	0.143	4.875	0.71612	0.95811
RegenerationR6	0.253	4.875	0.55629	0.84289
RegenerationBL	-0.256	4.875	0.58621	0.93695
RegenerationTP	-0.079	4.875	0.87193	1.00000

Genes with expression patterns similar to MligTC455_18272

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18272	1198	24.97	Mlig455_027206, Mlig455_050662	Neo: - Age: -	CUL5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1} Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1}
2.	MligTC455_41240	948	19.74	Mlig455_046519	Neo: - Age: -	CHRNA10	1.777	-	-	-	0.955	0.822	-	Mlig455_046519 {REF} {Length: 3170} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=138.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=67.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=172, Expect=3e-48]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=169, Expect=8e-47]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=164, Expect=3e-45]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=174, Expect=2e-49]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=171, Expect=5e-48]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=169, Expect=3e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=166, Expect=6e-46]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=176, Expect=6e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=317, Expect=1e-104]} {RNA1509_9446} {RNA1310_20858, RNA1509_9446} {RNA1509_9446, RNA815_4846}
3.	MligTC455_42450	191	3.98	Mlig455_044139	Neo: - Age: logFC(26M/2M)=0.453	MRAS	0.951	-	-	-	0.951	-	-	Mlig455_044139 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=343.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=136.1]; ADP-ribosylation factor family [PF00025.23, score=68.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=67.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=31.1]; RsgA GTPase [PF03193.18, score=27.3]; Septin [PF00735.20, score=23.8]; NB-ARC domain [PF00931.24, score=23.3]; AAA ATPase domain [PF13191.8, score=21.1]; Conserved hypothetical ATP binding protein [PF03029.19, score=19.7]; NUBPL iron-transfer P-loop NTPase [PF10609.11, score=18.8]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=237, Expect=1e-76]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-76]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=174, Expect=8e-53]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=3e-78]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=209, Expect=7e-66]} {RNA1509_34936} {RNA1310_19797} {RNA815_1221.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18272

1198

24.97

Mlig455_027206, Mlig455_050662

Neo: -

Age: -

CUL5

1.000

MligTC455_41240

948

19.74

Mlig455_046519

Neo: -

Age: -

CHRNA10

1.777

0.955

0.822

Mlig455_046519 {REF} {Length: 3170} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=138.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=67.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=172, Expect=3e-48]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=169, Expect=8e-47]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=166, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=164, Expect=3e-45]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=174, Expect=2e-49]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=171, Expect=5e-48]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=169, Expect=3e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=166, Expect=6e-46]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=176, Expect=6e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=317, Expect=1e-104]} {RNA1509_9446} {RNA1310_20858, RNA1509_9446} {RNA1509_9446, RNA815_4846}

MligTC455_42450

191

3.98

Mlig455_044139

Neo: -

Age: logFC(26M/2M)=0.453

MRAS

0.951

Mlig455_044139 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=343.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=136.1]; ADP-ribosylation factor family [PF00025.23, score=68.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=67.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=31.1]; RsgA GTPase [PF03193.18, score=27.3]; Septin [PF00735.20, score=23.8]; NB-ARC domain [PF00931.24, score=23.3]; AAA ATPase domain [PF13191.8, score=21.1]; Conserved hypothetical ATP binding protein [PF03029.19, score=19.7]; NUBPL iron-transfer P-loop NTPase [PF10609.11, score=18.8]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=237, Expect=1e-76]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-76]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=174, Expect=8e-53]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=3e-78]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=209, Expect=7e-66]} {RNA1509_34936} {RNA1310_19797} {RNA815_1221.1}