TomoSeq data search

Data search

Results for MligTC455_41294

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41294	37	0.78	Mlig455_066003	Neo: - Age: -		Mlig455_066003 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_34275.2} {RNA815_22045}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41294

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.454	0.894	0.99972	1.00000
RegionR2	1.362	0.894	1.00000	1.00000
RegionR3	2.52	0.894	1.00000	1.00000
RegionR4	1.029	0.894	0.99986	1.00000
RegionR5	2.707	0.894	0.99989	1.00000
RegionR6	1.695	0.894	0.99992	1.00000
RegionR7	0.112	0.894	1.00000	1.00000
RegionR8	-3.971	0.894	0.99989	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.484	0.894	1.00000	1.00000
RegenerationR2	3.189	0.894	0.08516	0.46873
RegenerationR3	1.126	0.894	0.15880	0.59097
RegenerationR4	2.546	0.894	0.04624	0.34737
RegenerationR5	2.181	0.894	0.06453	0.40066
RegenerationR6	3.842	0.894	0.02215	0.18470
RegenerationBL	4.985	0.894	0.01517	0.12963
RegenerationTP	0.825	0.894	1.00000	1.00000

Genes with expression patterns similar to MligTC455_41294

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41294	37	0.78	Mlig455_066003	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_066003 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_34275.2} {RNA815_22045}
2.	MligTC455_31680	144	2.99	Mlig455_044648	Neo: Irradiation Age: logFC(26M/2M)=0.782 Region-enriched R5: 2.265/0.01715	PIF1	0.954	-	-	-	0.954	-	-	Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}
3.	MligTC455_25251	276	5.74	Mlig455_024452	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_024452 {REF} {Length: 4599} {Pfam: PH domain [PF00169.31, score=32.5]; PDZ domain [PF17820.3, score=21.9]} {Dmel: FBgn0051342, CG31342, [RH, Score=146, Expect=1e-36]} {Smed: dd_Smed_v6_12160_0_1, dd_Smed_v6_12160_0_1, [RH, Score=55.1, Expect=4e-08]} {RNA1509_14025} {RNA1310_13333, RNA1509_14025} {RNA1509_14025, RNA815_5023}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41294

0.78

Mlig455_066003

Neo: -

Age: -

1.000

Mlig455_066003 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_34275.2} {RNA815_22045}

MligTC455_31680

144

2.99

Mlig455_044648

Neo: Irradiation

Age: logFC(26M/2M)=0.782

Region-enriched R5: 2.265/0.01715

PIF1

0.954

Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

MligTC455_25251

276

5.74

Mlig455_024452

Neo: -

Age: -

0.953

Mlig455_024452 {REF} {Length: 4599} {Pfam: PH domain [PF00169.31, score=32.5]; PDZ domain [PF17820.3, score=21.9]} {Dmel: FBgn0051342, CG31342, [RH, Score=146, Expect=1e-36]} {Smed: dd_Smed_v6_12160_0_1, dd_Smed_v6_12160_0_1, [RH, Score=55.1, Expect=4e-08]} {RNA1509_14025} {RNA1310_13333, RNA1509_14025} {RNA1509_14025, RNA815_5023}