TomoSeq data search

Data search

Results for MligTC455_31680

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31680	144	2.99	Mlig455_044648	Neo: Irradiation Age: logFC(26M/2M)=0.782 Region-enriched R5: 2.265/0.01715	PIF1	Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31680

144

2.99

Mlig455_044648

Neo: Irradiation

Age: logFC(26M/2M)=0.782

Region-enriched R5: 2.265/0.01715

PIF1

Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Cumulative graph for MligTC455_31680

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.405	2.311	0.41064	1.00000
RegionR2	1.215	2.311	0.28771	0.67584
RegionR3	0.538	2.311	0.61513	1.00000
RegionR4	0.181	2.311	0.82342	1.00000
RegionR5	2.265	2.311	0.00196	0.01715
RegionR6	-0.289	2.311	0.88318	1.00000
RegionR7	-0.312	2.311	0.89151	1.00000
RegionR8	-0.193	2.311	0.94741	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.778	2.311	0.82707	1.00000
RegenerationR2	1.01	2.311	0.09865	0.49700
RegenerationR3	0.498	2.311	0.53674	0.87542
RegenerationR4	0.561	2.311	0.44684	0.84020
RegenerationR5	-0.266	2.311	0.64800	0.93143
RegenerationR6	1.897	2.311	0.03287	0.22630
RegenerationBL	1.979	2.311	0.05743	0.27798
RegenerationTP	1.675	2.311	0.19145	0.63009

Genes with expression patterns similar to MligTC455_31680

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31680	144	2.99	Mlig455_044648	Neo: Irradiation Age: logFC(26M/2M)=0.782 Region-enriched R5: 2.265/0.01715	PIF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}
2.	MligTC455_39810	156	3.25	Mlig455_039453	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_039453 {REF} {Length: 3274} {RNA1509_51368, RNA1509_56186, RNA1509_6550} {RNA1310_21584, RNA1509_51368, RNA1509_56186} {RNA1509_51368, RNA1509_56186, RNA815_10065}
3.	MligTC455_50824	222	4.62	Mlig455_044698	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.305		0.972	-	-	-	-	0.972	-	Mlig455_044698 {REF} {Length: 3946} {Mouse: ENSMUSG00000038528, Mfsd4b5, major facilitator superfamily domain containing 4B5, [Score=58.5, Expect=1e-08]} {RNA1509_14390, RNA1509_22841, RNA1509_39271} {RNA1310_2577.1, RNA1509_14390, RNA1509_39271} {RNA1509_14390, RNA1509_39271, RNA815_14372}
4.	MligTC455_28440	96	2	Mlig455_042908	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_042908 {REF} {Length: 5108} {TRANSSPLICED} {RNA1509_6737} {RNA1310_143.1} {RNA815_12188}
5.	MligTC455_40320	104	2.16	Mlig455_000767	Neo: - Age: logFC(26M/2M)=-1.363		0.962	-	-	-	0.962	-	-	Mlig455_000767 {REF} {Length: 1171} {RNA1310_35100} {RNA815_28489}
6.	MligTC455_41294	37	0.78	Mlig455_066003	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_066003 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_34275.2} {RNA815_22045}