Data search
Results for MligTC455_41334
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41334 | 2673 | 55.70 | Mlig455_016810 | Neo: - Age: - |
Mlig455_016810 {REF} {Length: 342} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1310_24353, RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320, RNA815_10234} |
Cumulative graph for MligTC455_41334
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.205 | 5.91 | 0.00743 | 0.26094 | |
| RegionR2 | -0.256 | 5.91 | 0.54868 | 0.91457 | |
| RegionR3 | 0.256 | 5.91 | 0.47832 | 0.98176 | |
| RegionR4 | 1.076 | 5.91 | 0.01324 | 0.07512 | |
| RegionR5 | 0.617 | 5.91 | 0.07593 | 0.25216 | |
| RegionR6 | 0.377 | 5.91 | 0.29510 | 0.88658 | |
| RegionR7 | 0.368 | 5.91 | 0.34282 | 0.97985 | |
| RegionR8 | -0.233 | 5.91 | 0.61912 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.892 | 5.91 | 0.04927 | 0.69573 | |
| RegenerationR2 | 0.115 | 5.91 | 0.78838 | 0.98575 | |
| RegenerationR3 | -0.366 | 5.91 | 0.40819 | 0.80721 | |
| RegenerationR4 | -0.459 | 5.91 | 0.32437 | 0.76171 | |
| RegenerationR5 | -0.406 | 5.91 | 0.35048 | 0.76516 | |
| RegenerationR6 | -0.594 | 5.91 | 0.18546 | 0.52129 | |
| RegenerationBL | -0.456 | 5.91 | 0.28684 | 0.64852 | |
| RegenerationTP | 0.034 | 5.91 | 0.94007 | 1.00000 |
Genes with expression patterns similar to MligTC455_41334
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41334 | 2673 | 55.7 | Mlig455_016810 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016810 {REF} {Length: 342} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1310_24353, RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320, RNA815_10234} | |
| 2. | MligTC455_34723 | 441 | 9.2 | Mlig455_051959 | Neo: - Age: Up-Down-Down |
NIM1K | 1.838 | - | 0.883 | - | - | 0.955 | - | Mlig455_051959 {REF} {Length: 3455} {Pfam: Protein kinase domain [PF00069.27, score=116.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=56.1]; Kinase-like [PF14531.8, score=18.5]} {Human: ENSG00000177453, NIM1K, NIM1 serine/threonine protein kinase, [Score=240, Expect=1e-76]} {Mouse: ENSMUSG00000095930, Nim1k, NIM1 serine/threonine protein kinase, [Score=241, Expect=4e-77]} {Dmel: FBgn0031299, CG4629, [Score=152, Expect=3e-42]} {Celegans: WBGene00009867, F49C5.4, [Score=182, Expect=8e-54]} {Smed: dd_Smed_v6_15794_0_1, dd_Smed_v6_15794_0_1, [Score=214, Expect=1e-66]} {RNA1509_24864, RNA1509_26319} {RNA1310_21151.1, RNA1509_24864} {RNA1509_24864, RNA815_8109.1} |
| 3. | MligTC455_48076 | 850 | 17.7 | Mlig455_070531 | Neo: - Age: - Region-enriched R2: 1.122/0.04544 |
RNF185 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_070531 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; RING-H2 zinc finger domain [PF12678.9, score=23.6]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=1e-51]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=168, Expect=7e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=2e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1310_12532.1, RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1509_12431, RNA1509_35387, RNA1509_50361, RNA815_8137.1} |
| 4. | MligTC455_29103 | 3633 | 75.68 | Mlig455_040744 | Neo: - Age: - Regeneration-downregulated BL: -1.290 Regeneration-depleted BL: -1.290 |
0.969 | - | - | - | - | 0.969 | - | Mlig455_040744 {REF} {Length: 2153} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.1]; Ankyrin repeats (many copies) [PF13637.8, score=32.3]; Ankyrin repeats (many copies) [PF13857.8, score=30.8]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeat [PF13606.8, score=26.5]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=55.1, Expect=6e-08]} {RNA1509_1419, RNA1509_44630} {RNA1310_18767.1, RNA1509_44630} {RNA1509_44630, RNA815_4150} | |
| 5. | MligTC455_19654 | 1827 | 38.05 | Mlig455_058817 | Neo: - Age: - Region-enriched R4: 1.393/0.00030 |
TMEM222 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_058817 {REF} {Length: 1076} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=129.3]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [RH, Score=201, Expect=1e-65]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [RH, Score=194, Expect=4e-63]} {Dmel: FBgn0032000, CG8372, [RH, Score=163, Expect=4e-51]} {Celegans: WBGene00019221, H20J04.6, [RH, Score=183, Expect=2e-59]} {Smed: dd_Smed_v6_1946_0_1, dd_Smed_v6_1946_0_1, [RH, Score=221, Expect=1e-74]} {RNA1509_13147, RNA1509_35412, RNA1509_53388} {RNA1310_31771.3, RNA1509_13147, RNA1509_35412, RNA1509_53388} {RNA1509_13147, RNA1509_35412, RNA1509_53388, RNA815_16171.1} |
| 6. | MligTC455_43307 | 242 | 5.04 | Mlig455_061239 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_061239 {REF} {Length: 792} {NoTransDecoderORF} {RNA1509_38062} {RNA1310_36873} {RNA815_8442.1} | |
| 7. | MligTC455_28476 | 731 | 15.23 | Mlig455_060387 | Neo: - Age: logFC(26M/2M)=-0.326 Region-enriched R2: 1.963/0.00119 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_060387 {REF} {Length: 5044} {Smed: dd_Smed_v6_5297_0_1, dd_Smed_v6_5297_0_1, [RH, Score=241, Expect=2e-65]} {RNA1509_3272} {RNA1310_3570} {RNA815_1056} | |
| 8. | MligTC455_54199 | 49 | 1.01 | Mlig455_034715, Mlig455_067590 | Neo: - Age: - Region-enriched R4: 5.064/0.03900 Regeneration-downregulated R4: -6.361 Regeneration-depleted R4: -6.361 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_034715 {REF} {Length: 5399} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=41.4]} {Smed: dd_Smed_v6_16515_0_1, dd_Smed_v6_16515_0_1, [Score=94.4, Expect=2e-21]} {RNA1310_64595} {RNA815_44335} Mlig455_067590 {REF} {Length: 3463} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=27.2]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [Score=74.3, Expect=5e-15]} {RNA1310_64595} {RNA815_44335} |
|
| 9. | MligTC455_28046 | 217 | 4.52 | Mlig455_054081 | Neo: - Age: Down-Down-Up |
0.954 | - | - | - | - | 0.954 | - | Mlig455_054081 {REF} {Length: 2315} {RNA1509_14175} {RNA1310_16956} {RNA815_8462} | |
| 10. | MligTC455_47803 | 609 | 12.69 | Mlig455_042586 | Neo: - Age: - Region-enriched R2: 2.248/0.00320 |
SMKR1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_042586 {REF} {Length: 1831} {TRANSSPLICED} {Human: ENSG00000240204, SMKR1, small lysine rich protein 1, [RH, Score=54.3, Expect=5e-11]} {Dmel: FBgn0266615, CG45122, [Score=41.6, Expect=5e-06]} {Smed: dd_Smed_v6_10158_0_1, dd_Smed_v6_10158_0_1, [RH, Score=44.3, Expect=3e-07]} {RNA1509_37781} {RNA1310_41265, RNA1509_37781} {RNA1509_37781, RNA815_11227.2} |
| 11. | MligTC455_04273 | 1905 | 39.69 | Mlig455_014980, Mlig455_027959, Mlig455_027986, Mlig455_042890, Mlig455_056217 | Neo: - Age: logFC(26M/2M)=0.365 Region-enriched R4: 1.233/0.00679 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_014980 {REF} {Length: 2410} {TRANSSPLICED} {Pfam: Plasmid protein of unknown function (Plasmid_RAQPRD) [PF09686.12, score=24.0]} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1} Mlig455_027959 {REF} {Length: 3263} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382} Mlig455_027986 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382} Mlig455_042890 {REF} {Length: 2273} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1} Mlig455_056217 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382} |
|
| 12. | MligTC455_09341 | 2563 | 53.4 | Mlig455_040188 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_040188 {REF} {Length: 902} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772} | |
| 13. | MligTC455_28474 | 734 | 15.29 | Mlig455_034006 | Neo: - Age: logFC(26M/2M)=-0.457 Region-enriched R2: 1.949/0.00020 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_034006 {REF} {Length: 5235} {Smed: dd_Smed_v6_5297_0_1, dd_Smed_v6_5297_0_1, [Score=226, Expect=2e-60]} {RNA1509_3272} {RNA1310_3570} {RNA815_1056} |
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