M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09341

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09341 2563 53.40 Mlig455_040188

Neo: -

Age: -

 Mlig455_040188 {REF} {Length: 902} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772}

Cumulative graph for MligTC455_09341

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.146 5.871 0.00356 0.19030
RegionR2 0.112 5.871 0.71354 1.00000
RegionR3 0.223 5.871 0.38980 0.92001
RegionR4 0.722 5.871 0.02250 0.11080
RegionR5 0.158 5.871 0.53829 0.90127
RegionR6 0.273 5.871 0.29932 0.89059
RegionR7 0.512 5.871 0.07023 0.50947
RegionR8 0.146 5.871 0.66884 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.704 5.871 0.06652 0.74431
RegenerationR2 -0.06 5.871 0.82830 0.99695
RegenerationR3 -0.518 5.871 0.08762 0.48047
RegenerationR4 -0.633 5.871 0.04676 0.34931
RegenerationR5 -0.24 5.871 0.41834 0.81013
RegenerationR6 -0.844 5.871 0.00724 0.10426
RegenerationBL -0.677 5.871 0.03365 0.20564
RegenerationTP -0.151 5.871 0.64366 0.98522


Genes with expression patterns similar to MligTC455_09341

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09341 2563 53.4 Mlig455_040188

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040188 {REF} {Length: 902} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772}
2. MligTC455_45703 433 9.03 Mlig455_018343

Neo: -

Age: -

Region-enriched R2: 1.674/0.02931

 ADAM12 2.615 - - - 0.711 0.948 0.956 Mlig455_018343 {REF} {Length: 4207} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=123.1]; Disintegrin [PF00200.25, score=73.1]; Metallo-peptidase family M12 [PF13688.8, score=48.1]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=40.5]; ADAM cysteine-rich [PF08516.14, score=39.9]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=39.4]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=37.8]} {Human: ENSG00000148848, ADAM12, ADAM metallopeptidase domain 12, [Score=231, Expect=4e-64]; ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=230, Expect=2e-63]; ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=229, Expect=9e-64]; ENSG00000139985, ADAM21, ADAM metallopeptidase domain 21, [Score=224, Expect=1e-61]; ENSG00000069206, ADAM7, ADAM metallopeptidase domain 7, [Score=222, Expect=1e-60]; ENSG00000042980, ADAM28, ADAM metallopeptidase domain 28, [Score=222, Expect=1e-60]} {Mouse: ENSMUSG00000054555, Adam12, a disintegrin and metallopeptidase domain 12 (meltrin alpha), [Score=228, Expect=3e-62]; ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=226, Expect=4e-62]; ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=224, Expect=3e-61]} {Dmel: FBgn0265140, Meltrin, [Score=247, Expect=1e-68]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=219, Expect=3e-59]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=222, Expect=6e-60]} {RNA1509_54780, RNA1509_7145} {RNA1310_4464.2, RNA1509_54780} {RNA1509_54780, RNA815_1440.1}
3. MligTC455_29103 3633 75.68 Mlig455_040744

Neo: -

Age: -

Regeneration-downregulated BL: -1.290

Regeneration-depleted BL: -1.290

 1.791 - - - 0.839 0.952 - Mlig455_040744 {REF} {Length: 2153} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.1]; Ankyrin repeats (many copies) [PF13637.8, score=32.3]; Ankyrin repeats (many copies) [PF13857.8, score=30.8]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeat [PF13606.8, score=26.5]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=55.1, Expect=6e-08]} {RNA1509_1419, RNA1509_44630} {RNA1310_18767.1, RNA1509_44630} {RNA1509_44630, RNA815_4150}
4. MligTC455_06965 768 15.99 Mlig455_011672, Mlig455_011674, Mlig455_049919

Neo: -

Age: Down-Up-Up

 NOTCH1 1.726 - - - 0.773 0.953 -

Mlig455_011672 {REF} {Length: 815} {RNA1509_54595} {RNA1310_59282} {RNA815_18996}

Mlig455_011674 {REF} {Length: 490} {NoTransDecoderORF} {RNA1509_54595} {RNA1310_59282} {RNA815_18996}

Mlig455_049919 {REF} {Length: 1587} {Pfam: EGF-like domain [PF00008.29, score=27.3]; EGF-like domain [PF07974.15, score=23.4]; Human growth factor-like EGF [PF12661.9, score=19.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=53.9, Expect=2e-08]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=52.0, Expect=7e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=51.6, Expect=9e-08]} {Dmel: FBgn0259140, CG42255, [Score=50.4, Expect=2e-07]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=52.4, Expect=2e-08]} {RNA1509_54595} {RNA1310_59282} {RNA815_18996}
5. MligTC455_47622 634 13.21 Mlig455_061895

Neo: -

Age: -

 1.695 - - - 0.966 - 0.729 Mlig455_061895 {REF} {Length: 2541} {RNA1509_3407, RNA1509_50257} {RNA1310_8526.1, RNA1509_50257} {RNA1509_50257, RNA815_3060}
6. MligTC455_48076 850 17.7 Mlig455_070531

Neo: -

Age: -

Region-enriched R2: 1.122/0.04544

 RNF185 0.974 - - - - 0.974 - Mlig455_070531 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; RING-H2 zinc finger domain [PF12678.9, score=23.6]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=1e-51]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=168, Expect=7e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=2e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1310_12532.1, RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1509_12431, RNA1509_35387, RNA1509_50361, RNA815_8137.1}
7. MligTC455_06036 344 7.17 Mlig455_033356

Neo: -

Age: -

 PRKAG2 0.972 - - - - 0.972 - Mlig455_033356 {REF} {Length: 3376} {Pfam: CBS domain [PF00571.30, score=98.5]} {Human: ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [Score=340, Expect=1e-114]; ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [Score=340, Expect=2e-114]} {Mouse: ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [Score=346, Expect=7e-114]; ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [Score=339, Expect=1e-114]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=353, Expect=3e-117]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=289, Expect=4e-93]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=298, Expect=2e-98]} {RNA1509_48129} {RNA1310_7406.2} {RNA815_1861}
8. MligTC455_45404 78 1.63 Mlig455_001379

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.729

 SLC6A5 0.972 - - - - 0.972 - Mlig455_001379 {REF} {Length: 6574} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=793.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=421, Expect=3e-128]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=422, Expect=7e-129]} {Dmel: FBgn0034911, CG5549, [Score=395, Expect=1e-115]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=342, Expect=2e-102]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=389, Expect=1e-119]} {RNA1509_14194} {RNA1310_1653.1} {RNA815_6812}
9. MligTC455_43307 242 5.04 Mlig455_061239

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_061239 {REF} {Length: 792} {NoTransDecoderORF} {RNA1509_38062} {RNA1310_36873} {RNA815_8442.1}
10. MligTC455_37363 784 16.34 Mlig455_031870

Neo: -

Age: -

Region-enriched R2: 1.726/0.00342

 PCM1 0.966 - - - - 0.966 - Mlig455_031870 {REF} {Length: 7459} {TRANSSPLICED} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=227.3]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [RH, Score=213, Expect=7e-55]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [RH, Score=204, Expect=2e-52]} {RNA1509_20299, RNA1509_4104, RNA1509_52144} {RNA1310_2140, RNA1509_20299, RNA1509_4104, RNA1509_52144} {RNA1509_20299, RNA1509_4104, RNA1509_52144, RNA815_19842}
11. MligTC455_51180 590 12.29 Mlig455_012498, Mlig455_012587

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_012498 {REF} {Length: 3214} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=55.2]} {Smed: dd_Smed_v6_12193_0_1, dd_Smed_v6_12193_0_1, [RH, Score=58.2, Expect=1e-08]} {RNA1509_18736} {RNA1310_14745, RNA1509_18736} {RNA1509_18736, RNA815_5188}

Mlig455_012587 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=52.3]} {Smed: dd_Smed_v6_6417_0_1, dd_Smed_v6_6417_0_1, [RH, Score=52.8, Expect=4e-07]} {RNA1509_18736} {RNA1310_14745} {RNA815_5188}
12. MligTC455_07684 42 0.88 Mlig455_022129

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_022129 {REF} {Length: 443} {NoTransDecoderORF} {RNA1310_69626}
13. MligTC455_18467 566 11.78 Mlig455_005606, Mlig455_014454, Mlig455_070392

Neo: -

Age: Down-Up-Down

 0.964 - - - - 0.964 -

Mlig455_005606 {REF} {Length: 1420} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=32.2]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549} {RNA815_9136}

Mlig455_014454 {REF} {Length: 1548} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=32.2]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549} {RNA815_9136}

Mlig455_070392 {REF} {Length: 1549} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=31.8]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549, RNA1509_34109} {RNA1509_34109, RNA815_9136}
14. MligTC455_26556 96 1.99 Mlig455_067311

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.885

 RRAGB 0.961 - - - - 0.961 - Mlig455_067311 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=350.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.2]; Ras family [PF00071.24, score=33.9]; ADP-ribosylation factor family [PF00025.23, score=31.4]; 50S ribosome-binding GTPase [PF01926.25, score=28.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.0]} {Human: ENSG00000083750, RRAGB, Ras related GTP binding B, [RH, Score=502, Expect=3e-180]; ENSG00000155876, RRAGA, Ras related GTP binding A, [RH, Score=501, Expect=2e-180]} {Mouse: ENSMUSG00000070934, Rraga, Ras-related GTP binding A, [RH, Score=501, Expect=1e-180]; ENSMUSG00000041658, Rragb, Ras-related GTP binding B, [RH, Score=489, Expect=5e-175]} {Dmel: FBgn0037647, RagA-B, Ras-related GTP binding A/B, [RH, Score=479, Expect=3e-172]} {Celegans: WBGene00006414, raga-1, RAs-related GTP-binding protein A, [RH, Score=427, Expect=1e-151]} {Smed: dd_Smed_v6_4388_0_1, dd_Smed_v6_4388_0_1, [RH, Score=434, Expect=1e-154]} {RNA1509_11083} {RNA1310_13012} {RNA815_15460}
15. MligTC455_29036 1382 28.79 Mlig455_066081

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_066081 {REF} {Length: 758} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=23.2]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=51.2, Expect=7e-08]} {RNA1310_29178.1} {RNA815_36139}
16. MligTC455_42499 982 20.45 Mlig455_062692

Neo: Irradiation

Age: -

Region-enriched R4: 1.491/0.00202

 PPHLN1 0.961 - - - - 0.961 - Mlig455_062692 {REF} {Length: 2168} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=19.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=73.9, Expect=4e-14]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_3002_0_2, dd_Smed_v6_3002_0_2, [Score=73.2, Expect=3e-14]} {RNA1509_3916} {RNA1310_29650.1} {RNA815_12725}
17. MligTC455_39212 26 0.55 Mlig455_032317

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_032317 {REF} {Length: 883} {RNA1509_17207} {RNA1310_664.1} {RNA815_31923}
18. MligTC455_19654 1827 38.05 Mlig455_058817

Neo: -

Age: -

Region-enriched R4: 1.393/0.00030

 TMEM222 0.954 - - - - 0.954 - Mlig455_058817 {REF} {Length: 1076} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=129.3]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [RH, Score=201, Expect=1e-65]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [RH, Score=194, Expect=4e-63]} {Dmel: FBgn0032000, CG8372, [RH, Score=163, Expect=4e-51]} {Celegans: WBGene00019221, H20J04.6, [RH, Score=183, Expect=2e-59]} {Smed: dd_Smed_v6_1946_0_1, dd_Smed_v6_1946_0_1, [RH, Score=221, Expect=1e-74]} {RNA1509_13147, RNA1509_35412, RNA1509_53388} {RNA1310_31771.3, RNA1509_13147, RNA1509_35412, RNA1509_53388} {RNA1509_13147, RNA1509_35412, RNA1509_53388, RNA815_16171.1}
19. MligTC455_29816 317 6.61 Mlig455_067302

Neo: -

Age: Up-Down-Down

 RNF31 0.954 - - - - 0.954 - Mlig455_067302 {REF} {Length: 6139} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=99.7]; IBR domain, a half RING-finger domain [PF01485.23, score=33.9]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [RH, Score=308, Expect=2e-86]; ENSG00000092098, RNF31, ring finger protein 31, [RH, Score=308, Expect=2e-86]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=301, Expect=2e-84]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [RH, Score=256, Expect=3e-68]} {Smed: dd_Smed_v6_4025_0_1, dd_Smed_v6_4025_0_1, [RH, Score=180, Expect=9e-47]} {RNA1509_4535} {RNA1310_1489} {RNA815_1870.1}
20. MligTC455_34253 1073 22.35 Mlig455_035968

Neo: -

Age: -

Region-enriched R5: 1.204/0.04277

 PGK1 0.952 - - - - 0.952 - Mlig455_035968 {REF} {Length: 2381} {Pfam: Phosphoglycerate kinase [PF00162.21, score=488.1]} {Human: ENSG00000102144, PGK1, phosphoglycerate kinase 1, [RH, Score=588, Expect=0.0]; ENSG00000170950, PGK2, phosphoglycerate kinase 2, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000062070, Pgk1, phosphoglycerate kinase 1, [RH, Score=587, Expect=0.0]; ENSMUSG00000031233, Pgk2, phosphoglycerate kinase 2, [RH, Score=572, Expect=0.0]} {Dmel: FBgn0250906, Pgk, Phosphoglycerate kinase, [RH, Score=562, Expect=0.0]} {Celegans: WBGene00020185, pgk-1, Probable phosphoglycerate kinase, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_972_0_1, dd_Smed_v6_972_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_1929, RNA1509_24971} {RNA1310_10765.1, RNA1509_1929, RNA1509_24971} {RNA1509_1929, RNA1509_24971, RNA815_5032.1}
21. MligTC455_47927 43 0.9 Mlig455_029720

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_029720 {REF} {Length: 2459} {RNA1509_35671} {RNA1310_75812} {RNA815_33002}
22. MligTC455_31024 469 9.77 Mlig455_008666

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_008666 {REF} {Length: 399} {NoTransDecoderORF} {RNA1509_24158} {RNA1310_3578.1} {RNA815_24034}
23. MligTC455_41334 2673 55.7 Mlig455_016810

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_016810 {REF} {Length: 342} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1310_24353, RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320} {RNA1509_28722, RNA1509_28929, RNA1509_31130, RNA1509_5320, RNA815_10234}
24. MligTC455_28325 467 9.73 Mlig455_022268, Mlig455_036441, Mlig455_037355, Mlig455_062974

Neo: -

Age: -

Region-enriched R8: 2.686/0.01742

 0.95 - - - - 0.950 -

Mlig455_022268 {REF} {Length: 1417} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_036441 {REF} {Length: 3744} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_037355 {REF} {Length: 1390} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_062974 {REF} {Length: 2207} {RNA1509_56606} {RNA1310_32667} {RNA815_31246}
25. MligTC455_33777 445 9.27 Mlig455_016308

Neo: -

Age: -

 TTC7B 0.95 - - - - 0.950 - Mlig455_016308 {REF} {Length: 5086} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat protein 7 N-terminal [PF19440.1, score=201.6]; Tetratricopeptide repeat [PF07719.19, score=74.9]; Tetratricopeptide repeat [PF13181.8, score=70.2]; Tetratricopeptide repeat [PF13431.8, score=61.0]; Tetratricopeptide repeat [PF14559.8, score=58.7]; Tetratricopeptide repeat [PF13432.8, score=56.7]; Tetratricopeptide repeat [PF00515.30, score=54.2]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=40.9]; Tetratricopeptide repeat [PF13428.8, score=39.9]; Tetratricopeptide repeat [PF13424.8, score=32.1]; C2H2-type zinc finger [PF13894.8, score=28.3]; Zinc finger, C2H2 type [PF00096.28, score=22.8]; Tetratricopeptide repeat [PF13429.8, score=22.1]; TPR repeat [PF13414.8, score=21.0]; Tetratricopeptide repeat [PF13174.8, score=19.3]} {Human: ENSG00000165914, TTC7B, tetratricopeptide repeat domain 7B, [RH, Score=361, Expect=1e-110]} {Mouse: ENSMUSG00000033530, Ttc7b, tetratricopeptide repeat domain 7B, [RH, Score=359, Expect=4e-110]} {Dmel: FBgn0021847, l(2)k14710, lethal (2) k14710, [RH, Score=267, Expect=3e-76]} {Celegans: WBGene00021444, ttc-7, TeTratriCopeptide repeat domain protein related, [RH, Score=129, Expect=3e-30]} {Smed: dd_Smed_v6_5599_0_1, dd_Smed_v6_5599_0_1, [RH, Score=313, Expect=3e-93]} {RNA1509_7738} {RNA1310_5413.1} {RNA815_2156}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA