M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41336

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41336 2300 47.91 Mlig455_057780

Neo: -

Age: -

Region-enriched R4: 1.418/0.03753

 Mlig455_057780 {REF} {Length: 1487} {RNA1509_16083} {RNA1310_28218} {RNA815_20896}

Cumulative graph for MligTC455_41336

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.61 5.695 0.07822 0.61319
RegionR2 -0.136 5.695 0.78398 1.00000
RegionR3 0.384 5.695 0.35453 0.88995
RegionR4 1.418 5.695 0.00522 0.03753
RegionR5 0.166 5.695 0.69812 1.00000
RegionR6 -0.381 5.695 0.39906 0.97105
RegionR7 -0.205 5.695 0.66582 1.00000
RegionR8 0.365 5.695 0.46722 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.249 5.695 0.84649 1.00000
RegenerationR2 0.292 5.695 0.57255 0.90319
RegenerationR3 -0.596 5.695 0.28377 0.71566
RegenerationR4 -0.808 5.695 0.15154 0.58017
RegenerationR5 -0.576 5.695 0.28697 0.71518
RegenerationR6 -0.42 5.695 0.44800 0.76892
RegenerationBL 0.283 5.695 0.55473 0.91078
RegenerationTP -0.484 5.695 0.36884 0.80660


Genes with expression patterns similar to MligTC455_41336

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41336 2300 47.91 Mlig455_057780

Neo: -

Age: -

Region-enriched R4: 1.418/0.03753

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_057780 {REF} {Length: 1487} {RNA1509_16083} {RNA1310_28218} {RNA815_20896}
2. MligTC455_47670 709 14.77 Mlig455_064585

Neo: -

Age: -

Region-enriched R2: 1.616/0.00648

 3.417 - - 0.774 0.953 0.864 0.826 Mlig455_064585 {REF} {Length: 1016} {RNA1509_15853} {RNA1310_37053} {RNA815_24569.1}
3. MligTC455_49728 9366 195.13 Mlig455_064924, Mlig455_064956

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.287

 3.364 0.791 - 0.822 0.783 - 0.968

Mlig455_064924 {REF} {Length: 804} {Pfam: Universal stress protein family [PF00582.28, score=85.4]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [RH, Score=138, Expect=3e-42]} {RNA1509_11066} {RNA1310_18757.1} {RNA815_5768.1}

Mlig455_064956 {REF} {Length: 1238} {Pfam: Universal stress protein family [PF00582.28, score=85.4]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [RH, Score=138, Expect=3e-42]} {RNA1509_11066, RNA1509_17487, RNA1509_2031, RNA1509_3780, RNA1509_51744, RNA1509_6633} {RNA1310_18757.1, RNA1509_11066, RNA1509_17487, RNA1509_2031, RNA1509_3780, RNA1509_51744, RNA1509_6633} {RNA1509_11066, RNA1509_17487, RNA1509_2031, RNA1509_3780, RNA1509_51744, RNA1509_6633, RNA815_5768.1}
4. MligTC455_40418 4010 83.54 Mlig455_019035

Neo: -

Age: -

 MYCBP 3.175 - - 0.718 0.963 0.733 0.761 Mlig455_019035 {REF} {Length: 1108} {Pfam: TSC-22/dip/bun family [PF01166.20, score=28.0]; Centrosomin N-terminal motif 1 [PF07989.13, score=21.8]; bZIP transcription factor [PF00170.23, score=21.6]; Shugoshin N-terminal coiled-coil region [PF07558.13, score=20.1]; Cell division protein ZapB [PF06005.14, score=19.5]} {Human: ENSG00000214114, MYCBP, MYC binding protein, [RH, Score=126, Expect=6e-39]; ENSG00000274944, GJA9-MYCBP, GJA9-MYCBP readthrough, [RH, Score=121, Expect=1e-36]} {Mouse: ENSMUSG00000028647, Mycbp, MYC binding protein, [RH, Score=122, Expect=2e-37]} {Dmel: FBgn0038373, CG4546, [Score=77.0, Expect=1e-17]} {Smed: dd_Smed_v6_891_0_1, dd_Smed_v6_891_0_1, [RH, Score=101, Expect=3e-29]} {RNA1509_6680} {RNA1310_31720.1} {RNA815_11271.1}
5. MligTC455_48766 985 20.53 Mlig455_020052, Mlig455_022298

Neo: -

Age: logFC(26M/2M)=-0.287

 ODF3 2.558 - - - 0.950 0.777 0.831

Mlig455_020052 {REF} {Length: 1742} {TRANSSPLICED} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=82.0]} {Human: ENSG00000177947, ODF3, outer dense fiber of sperm tails 3, [RH, Score=188, Expect=6e-59]} {Mouse: ENSMUSG00000025482, Odf3, outer dense fiber of sperm tails 3, [RH, Score=187, Expect=1e-58]} {Dmel: FBgn0032010, CG8086, [RH, Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_2658_0_1, dd_Smed_v6_2658_0_1, [Score=304, Expect=4e-105]} {RNA1509_28289, RNA1509_56680} {RNA1310_15149, RNA1509_56680} {RNA1509_56680, RNA815_9422}

Mlig455_022298 {REF} {Length: 2031} {TRANSSPLICED} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=82.0]} {Human: ENSG00000177947, ODF3, outer dense fiber of sperm tails 3, [RH, Score=188, Expect=6e-59]} {Mouse: ENSMUSG00000025482, Odf3, outer dense fiber of sperm tails 3, [RH, Score=187, Expect=1e-58]} {Dmel: FBgn0032010, CG8086, [RH, Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_2658_0_1, dd_Smed_v6_2658_0_1, [Score=304, Expect=4e-105]} {RNA1509_28289, RNA1509_54276} {RNA1310_15149, RNA1509_28289, RNA1509_54276} {RNA1509_28289, RNA1509_54276, RNA815_9422}
6. MligTC455_14477 676 14.08 Mlig455_030081

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.270

 2.551 - - - 0.987 0.845 0.719 Mlig455_030081 {REF} {Length: 1773} {RNA1509_4043} {RNA1310_3308.1, RNA1509_4043} {RNA1509_4043, RNA815_1039.1}
7. MligTC455_49514 319 6.65 Mlig455_044307

Neo: -

Age: -

 AGBL2 2.547 0.790 - 0.807 0.950 - - Mlig455_044307 {REF} {Length: 4376} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=73.3]; Zinc carboxypeptidase [PF00246.26, score=65.6]} {Human: ENSG00000285501, AGBL2, ATP/GTP binding protein like 2, [Score=560, Expect=0.0]; ENSG00000165923, AGBL2, ATP/GTP binding protein like 2, [Score=560, Expect=0.0]; ENSG00000146856, AGBL3, ATP/GTP binding protein like 3, [Score=535, Expect=7e-173]} {Mouse: ENSMUSG00000040812, Agbl2, ATP/GTP binding protein-like 2, [Score=556, Expect=0.0]; ENSMUSG00000038836, Agbl3, ATP/GTP binding protein-like 3, [Score=540, Expect=8e-174]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=538, Expect=1e-176]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [Score=267, Expect=3e-74]} {Smed: dd_Smed_v6_13450_0_1, dd_Smed_v6_13450_0_1, [Score=585, Expect=0.0]} {RNA1509_10895} {RNA1310_1654.2} {RNA815_1445.1}
8. MligTC455_41757 2210 46.04 Mlig455_067601

Neo: -

Age: Down-Down-Up

 2.528 - - 0.868 0.953 - 0.707 Mlig455_067601 {REF} {Length: 2908} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1310_19846.1, RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771, RNA815_7395.2}
9. MligTC455_29048 529 11.01 Mlig455_024096

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.420

Region-enriched R2: 1.997/0.00679

 WDR49 2.461 - - 0.794 0.954 - 0.713 Mlig455_024096 {REF} {Length: 4603} {Pfam: WD domain, G-beta repeat [PF00400.34, score=72.6]; EF-hand domain pair [PF13833.8, score=25.0]; EF-hand domain pair [PF13499.8, score=20.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.2]} {Human: ENSG00000174776, WDR49, WD repeat domain 49, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000104301, Wdr49, WD repeat domain 49, [RH, Score=471, Expect=1e-151]} {Dmel: FBgn0267449, WDY, WD40 Y, [Score=142, Expect=4e-34]} {Smed: dd_Smed_v6_13248_0_6, dd_Smed_v6_13248_0_6, [RH, Score=932, Expect=0.0]} {RNA1509_12036} {RNA1310_8128.1} {RNA815_8389.1}
10. MligTC455_41828 699 14.57 Mlig455_055575

Neo: -

Age: -

 2.425 - - - 0.969 0.751 0.705 Mlig455_055575 {REF} {Length: 3023} {Dmel: FBgn0264693, ens, ensconsin, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_5361_0_1, dd_Smed_v6_5361_0_1, [RH, Score=65.1, Expect=1e-10]} {RNA1509_19058, RNA1509_59334} {RNA1310_6742.2, RNA1509_59334} {RNA1509_59334, RNA815_12863}
11. MligTC455_32309 828 17.24 Mlig455_050857

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.573

 ZAN 1.878 - - - 0.954 0.924 - Mlig455_050857 {REF} {Length: 9674} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.8, Expect=5e-07]} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_458, RNA1509_7032} {RNA1310_3777.1, RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032, RNA815_49.1}
12. MligTC455_51985 306 6.38 Mlig455_026161

Neo: -

Age: logFC(26M/2M)=-0.411

 1.736 - - - 0.963 0.773 - Mlig455_026161 {REF} {Length: 3131} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=39.8]} {Smed: dd_Smed_v6_3423_0_1, dd_Smed_v6_3423_0_1, [Score=78.6, Expect=6e-17]} {RNA1509_23666} {RNA1310_19234.2} {RNA815_18307}
13. MligTC455_51537 225 4.69 Mlig455_064569

Neo: -

Age: -

 1.701 - - - 0.751 - 0.950 Mlig455_064569 {REF} {Length: 2141} {RNA1310_34295.1} {RNA815_22630}
14. MligTC455_44259 1042 21.7 Mlig455_064451, Mlig455_064468

Neo: -

Age: logFC(26M/2M)=-0.279

 SGK494 0.971 - - - 0.971 - -

Mlig455_064451 {REF} {Length: 3163} {TRANSSPLICED} {RNA1509_51252} {RNA1310_18542} {RNA815_5015}

Mlig455_064468 {REF} {Length: 3122} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=176.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.3]; Fungal protein kinase [PF17667.3, score=17.9]} {Human: ENSG00000167524, SGK494, uncharacterized serine/threonine-protein kinase SgK494, [RH, Score=207, Expect=1e-61]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=181, Expect=7e-51]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=173, Expect=3e-48]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=173, Expect=3e-48]; ENSMUSG00000037643, Prkci, protein kinase C, iota, [Score=172, Expect=5e-47]} {Dmel: FBgn0283473, S6KL, S6 Kinase Like, [RH, Score=191, Expect=5e-55]} {Celegans: WBGene00017950, F31E3.2, Putative serine/threonine-protein kinase F31E3.2, [RH, Score=199, Expect=1e-58]} {Smed: dd_Smed_v6_7868_0_1, dd_Smed_v6_7868_0_1, [RH, Score=299, Expect=1e-95]} {RNA1509_51252} {RNA1310_18542} {RNA815_5015}
15. MligTC455_51932 416 8.66 Mlig455_024400

Neo: -

Age: -

 CBS 0.968 - - - 0.968 - - Mlig455_024400 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=210.9]; CBS domain [PF00571.30, score=47.7]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [RH, Score=615, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [RH, Score=444, Expect=1e-151]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [RH, Score=355, Expect=1e-114]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_36721, RNA1509_49877} {RNA1310_10809, RNA1509_36721, RNA1509_49877} {RNA1509_36721, RNA1509_49877, RNA815_3797.1}
16. MligTC455_36621 1171 24.4 Mlig455_042753

Neo: -

Age: -

Region-enriched R8: 1.364/0.04842

 ANK3 0.965 - - - 0.965 - - Mlig455_042753 {REF} {Length: 17509} {Pfam: UPA domain [PF17809.3, score=99.0]; ZU5 domain [PF00791.22, score=96.3]; Death domain [PF00531.24, score=44.8]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=463, Expect=1e-131]; ENSG00000145362, ANK2, ankyrin 2, [Score=460, Expect=1e-137]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=464, Expect=6e-132]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=462, Expect=2e-129]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=492, Expect=2e-138]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=481, Expect=2e-135]} {Smed: dd_Smed_v6_2072_0_18, dd_Smed_v6_2072_0_18, [Score=513, Expect=4e-158]} {RNA1509_25096, RNA1509_47873, RNA1509_59677} {RNA1310_955.2, RNA1509_25096, RNA1509_47873, RNA1509_59677} {RNA1509_25096, RNA1509_47873, RNA1509_59677, RNA815_1337}
17. MligTC455_50604 357 7.44 Mlig455_004187

Neo: -

Age: logFC(26M/2M)=-0.635

 KLF1 0.965 - - - 0.965 - - Mlig455_004187 {REF} {Length: 2786} {Pfam: Zinc-finger double domain [PF13465.8, score=38.4]; Zinc finger, C2H2 type [PF00096.28, score=36.9]; C2H2-type zinc ribbon [PF15909.7, score=27.4]; C2H2-type zinc finger [PF13894.8, score=23.7]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=130, Expect=2e-35]; ENSG00000102349, KLF8, Kruppel like factor 8, [Score=124, Expect=2e-33]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=125, Expect=2e-33]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=124, Expect=4e-33]; ENSMUSG00000041649, Klf8, Kruppel-like factor 8, [Score=121, Expect=3e-32]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=121, Expect=3e-33]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=120, Expect=7e-32]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=120, Expect=4e-31]; ENSMUSG00000025959, Klf7, Kruppel-like factor 7 (ubiquitous), [Score=119, Expect=6e-32]} {Dmel: FBgn0261705, CG42741, [Score=120, Expect=4e-32]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=115, Expect=8e-32]} {RNA1509_15595, RNA1509_15597} {RNA1310_30263, RNA1509_15595, RNA1509_15597} {RNA1509_15595, RNA1509_15597, RNA815_14612}
18. MligTC455_39896 196 4.08 Mlig455_013184

Neo: -

Age: -

 PAK2 0.957 - - - 0.957 - - Mlig455_013184 {REF} {Length: 3893} {Pfam: Protein kinase domain [PF00069.27, score=221.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=158.5]; P21-Rho-binding domain [PF00786.30, score=33.1]; Kinase-like [PF14531.8, score=27.7]; ABC1 atypical kinase-like domain [PF03109.18, score=24.0]; Phosphotransferase enzyme family [PF01636.25, score=19.7]} {Human: ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=308, Expect=3e-97]; ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=307, Expect=1e-96]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=308, Expect=4e-97]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=307, Expect=7e-97]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=280, Expect=8e-85]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=269, Expect=7e-86]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [Score=331, Expect=2e-107]} {RNA1509_26775} {RNA1310_17385, RNA1509_26775} {RNA1509_26775, RNA815_3384}
19. MligTC455_40375 72 1.5 Mlig455_002337

Neo: -

Age: -

Region-enriched R2: 5.371/0.02566

 HDAC4 0.955 - - - - 0.955 - Mlig455_002337 {REF} {Length: 5354} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=283.8]} {Human: ENSG00000068024, HDAC4, histone deacetylase 4, [RH, Score=420, Expect=2e-130]; ENSG00000061273, HDAC7, histone deacetylase 7, [RH, Score=407, Expect=6e-127]; ENSG00000048052, HDAC9, histone deacetylase 9, [RH, Score=405, Expect=3e-125]} {Mouse: ENSMUSG00000026313, Hdac4, histone deacetylase 4, [RH, Score=416, Expect=4e-129]; ENSMUSG00000022475, Hdac7, histone deacetylase 7, [RH, Score=415, Expect=2e-130]; ENSMUSG00000004698, Hdac9, histone deacetylase 9, [RH, Score=399, Expect=1e-122]; ENSMUSG00000008855, Hdac5, histone deacetylase 5, [RH, Score=397, Expect=7e-122]} {Dmel: FBgn0041210, HDAC4, Histone deacetylase 4, [RH, Score=395, Expect=3e-120]} {Celegans: WBGene00001837, hda-4, Histone deacetylase 4, [RH, Score=387, Expect=1e-120]} {Smed: dd_Smed_v6_9385_0_1, dd_Smed_v6_9385_0_1, [Score=433, Expect=1e-138]} {RNA1509_17700} {RNA1310_5730.1} {RNA815_4623}
20. MligTC455_15779 346 7.2 Mlig455_051968

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.525

 0.954 - - - 0.954 - - Mlig455_051968 {REF} {Length: 790} {RNA1509_45384} {RNA1310_49242.1} {RNA815_27288}
21. MligTC455_28622 626 13.05 Mlig455_028335, Mlig455_066149

Neo: -

Age: Down-Up-Down

 ANO7 0.95 - - - 0.950 - -

Mlig455_028335 {REF} {Length: 5358} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.5]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=98.7]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=303, Expect=5e-88]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=303, Expect=6e-89]} {Dmel: FBgn0036235, CG6938, [Score=279, Expect=2e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=432, Expect=1e-137]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=310, Expect=7e-92]} {RNA1509_16739} {RNA1310_3159} {RNA815_709.1}

Mlig455_066149 {REF} {Length: 4069} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.3]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=105.2]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=301, Expect=6e-87]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=300, Expect=2e-87]} {Dmel: FBgn0036235, CG6938, [Score=280, Expect=3e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=440, Expect=5e-140]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=311, Expect=4e-92]} {RNA1509_16739} {RNA1310_3045} {RNA815_709.1}
22. MligTC455_47966 2993 62.36 Mlig455_064676

Neo: -

Age: logFC(26M/2M)=-0.223

Regeneration-upregulated BL: 1.199

Regeneration-enriched BL: 1.199

 C17orf97 0.95 - - - - 0.950 - Mlig455_064676 {REF} {Length: 1836} {Pfam: ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=21.5]} {Human: ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]; ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]} {RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1310_16794, RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1509_22581, RNA1509_52369, RNA1509_8425, RNA815_9653}
23. MligTC455_52743 1780 37.09 Mlig455_038111

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.240

Region-enriched R5: 1.359/0.00000

 TBATA 0.95 - - - 0.950 - - Mlig455_038111 {REF} {Length: 2166} {Pfam: SPATIAL [PF15256.8, score=102.2]} {Human: ENSG00000166220, TBATA, thymus, brain and testes associated, [RH, Score=57.8, Expect=3e-09]} {Mouse: ENSMUSG00000020096, Tbata, thymus, brain and testes associated, [RH, Score=65.5, Expect=5e-12]} {Smed: dd_Smed_v6_8051_0_1, dd_Smed_v6_8051_0_1, [RH, Score=62.4, Expect=3e-11]} {RNA1509_38201, RNA1509_40143, RNA1509_41522, RNA1509_48879, RNA1509_50951, RNA1509_5924} {RNA1310_8923.1, RNA1509_38201, RNA1509_40143, RNA1509_41522, RNA1509_48879, RNA1509_50951, RNA1509_5924} {RNA1509_38201, RNA1509_40143, RNA1509_41522, RNA1509_48879, RNA1509_50951, RNA1509_5924, RNA815_3957.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA