TomoSeq data search

Data search

Results for MligTC455_41408

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41408	1177	24.52	Mlig455_020493	Neo: - Age: Down-Up-Up		Mlig455_020493 {REF} {Length: 3513} {RNA1509_11871, RNA1509_30407} {RNA1310_5093, RNA1509_30407} {RNA1509_30407, RNA815_7109}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41408

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.04	4.892	0.33966	0.98482
RegionR2	0.31	4.892	0.50704	0.88561
RegionR3	0.971	4.892	0.00598	0.10753
RegionR4	0.482	4.892	0.26778	0.57263
RegionR5	-0.227	4.892	0.52459	0.88721
RegionR6	-0.015	4.892	0.97037	1.00000
RegionR7	-0.62	4.892	0.23162	0.85507
RegionR8	0.138	4.892	0.81175	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.082	4.892	0.45200	1.00000
RegenerationR2	0.512	4.892	0.19108	0.63488
RegenerationR3	0.101	4.892	0.80749	0.98425
RegenerationR4	0.639	4.892	0.15460	0.58511
RegenerationR5	0.2	4.892	0.62951	0.92240
RegenerationR6	0.958	4.892	0.02488	0.19673
RegenerationBL	0.011	4.892	0.98290	1.00000
RegenerationTP	0.209	4.892	0.70523	1.00000

Genes with expression patterns similar to MligTC455_41408

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41408	1177	24.52	Mlig455_020493	Neo: - Age: Down-Up-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020493 {REF} {Length: 3513} {RNA1509_11871, RNA1509_30407} {RNA1310_5093, RNA1509_30407} {RNA1509_30407, RNA815_7109}
2.	MligTC455_39620	2299	47.89	Mlig455_061227	Neo: Int S/G2/M Age: logFC(26M/2M)=0.340	RBM34	0.961	-	-	-	0.961	-	-	Mlig455_061227 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.2]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=167, Expect=2e-47]} {Dmel: FBgn0032620, CG12288, [RH, Score=97.1, Expect=5e-22]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=110, Expect=9e-27]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [RH, Score=122, Expect=1e-31]} {RNA1509_8606} {RNA1310_27944.1} {RNA815_12068}
3.	MligTC455_41561	478	9.95	Mlig455_061256, Mlig455_062644	Neo: - Age: Up-Down-Up Regeneration-downregulated BL: -6.910 Regeneration-depleted BL: -6.910		0.956	-	-	-	-	-	0.956	Mlig455_061256 {REF} {Length: 1779} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=68.6]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.0, Expect=1e-08]} {RNA1509_47432} {RNA1310_38913, RNA1509_47432} {RNA1509_47432, RNA815_21374} Mlig455_062644 {REF} {Length: 1755} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=68.6]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.0, Expect=1e-08]} {RNA1509_47432} {RNA1310_38913} {RNA815_21374}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41408

1177

24.52

Mlig455_020493

Neo: -

Age: Down-Up-Up

1.000

Mlig455_020493 {REF} {Length: 3513} {RNA1509_11871, RNA1509_30407} {RNA1310_5093, RNA1509_30407} {RNA1509_30407, RNA815_7109}

MligTC455_39620

2299

47.89

Mlig455_061227

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.340

RBM34

0.961

Mlig455_061227 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.2]} {Human: ENSG00000188739, RBM34, RNA binding motif protein 34, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000033931, Rbm34, RNA binding motif protein 34, [RH, Score=167, Expect=2e-47]} {Dmel: FBgn0032620, CG12288, [RH, Score=97.1, Expect=5e-22]} {Celegans: WBGene00008688, F11A10.7, [RH, Score=110, Expect=9e-27]} {Smed: dd_Smed_v6_5246_0_1, dd_Smed_v6_5246_0_1, [RH, Score=122, Expect=1e-31]} {RNA1509_8606} {RNA1310_27944.1} {RNA815_12068}

MligTC455_41561

478

9.95

Mlig455_061256, Mlig455_062644

Neo: -

Age: Up-Down-Up

Regeneration-downregulated BL: -6.910

Regeneration-depleted BL: -6.910

0.956

Mlig455_061256 {REF} {Length: 1779} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=68.6]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.0, Expect=1e-08]} {RNA1509_47432} {RNA1310_38913, RNA1509_47432} {RNA1509_47432, RNA815_21374}

Mlig455_062644 {REF} {Length: 1755} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=68.6]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.0, Expect=1e-08]} {RNA1509_47432} {RNA1310_38913} {RNA815_21374}