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Results for MligTC455_41460

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41460 248 5.17 Mlig455_050207

Neo: -

Age: -

 Mlig455_050207 {REF} {Length: 3147} {RNA1509_54432} {RNA1310_30280, RNA1509_54432} {RNA1509_54432, RNA815_15876.1}

Cumulative graph for MligTC455_41460

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.479 2.778 0.80722 1.00000
RegionR2 -0.094 2.778 0.89362 1.00000
RegionR3 -0.492 2.778 0.43571 0.95294
RegionR4 0.316 2.778 0.66033 0.96006
RegionR5 -0.951 2.778 0.14132 0.38737
RegionR6 0.858 2.778 0.11323 0.61474
RegionR7 0.418 2.778 0.57909 1.00000
RegionR8 0.424 2.778 0.65467 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.233 2.778 0.93856 1.00000
RegenerationR2 -0.114 2.778 0.82681 0.99618
RegenerationR3 0.543 2.778 0.38615 0.79379
RegenerationR4 0.047 2.778 0.93635 1.00000
RegenerationR5 0.516 2.778 0.40241 0.80049
RegenerationR6 0.092 2.778 0.87354 1.00000
RegenerationBL -0.234 2.778 0.74598 1.00000
RegenerationTP -0.008 2.778 0.98945 1.00000


Genes with expression patterns similar to MligTC455_41460

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41460 248 5.17 Mlig455_050207

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_050207 {REF} {Length: 3147} {RNA1509_54432} {RNA1310_30280, RNA1509_54432} {RNA1509_54432, RNA815_15876.1}
2. MligTC455_34109 388 8.07 Mlig455_036207, Mlig455_060306, Mlig455_064034, Mlig455_064415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.742

 NYNRIN 0.959 - - - - - 0.959

Mlig455_036207 {REF} {Length: 2552} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.9]; Integrase zinc binding domain [PF17921.3, score=66.2]; Integrase core domain [PF00665.28, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.2]; H2C2 zinc finger [PF09337.12, score=26.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=243, Expect=9e-68]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Mlig455_060306 {REF} {Length: 3314} {Pfam: Integrase core domain [PF00665.28, score=45.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=66.6, Expect=2e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=1e-41]} {RNA1509_45628} {RNA1310_4631.1} {RNA815_1825.1}

Mlig455_064034 {REF} {Length: 907} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.0]; Integrase core domain [PF00665.28, score=41.0]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=94.0, Expect=8e-22]} {RNA1310_90344}

Mlig455_064415 {REF} {Length: 9411} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]} {RNA1509_34066} {RNA1310_1125} {RNA815_1825.1}
3. MligTC455_08333 172 3.59 Mlig455_025435, Mlig455_025445

Neo: -

Age: -

 TNS1 0.958 - - - - - 0.958

Mlig455_025435 {REF} {Length: 4797} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=67.1]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=38.4]; SH2 domain [PF00017.26, score=36.5]} {Human: ENSG00000079308, TNS1, tensin 1, [RH, Score=257, Expect=2e-69]; ENSG00000136205, TNS3, tensin 3, [RH, Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [RH, Score=256, Expect=1e-72]; ENSMUSG00000020422, Tns3, tensin 3, [RH, Score=251, Expect=1e-67]} {Dmel: FBgn0000244, by, blistery, [RH, Score=222, Expect=2e-60]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=243, Expect=6e-72]} {Smed: dd_Smed_v6_4454_0_2, dd_Smed_v6_4454_0_2, [Score=217, Expect=5e-59]} {RNA1509_43365} {RNA1310_7714, RNA1509_43365} {RNA1509_43365, RNA815_14514}

Mlig455_025445 {REF} {Length: 1758} {Pfam: C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=37.0]} {Human: ENSG00000079308, TNS1, tensin 1, [RH, Score=191, Expect=2e-53]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=191, Expect=3e-51]; ENSMUSG00000037003, Tns2, tensin 2, [Score=187, Expect=4e-50]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=67.8, Expect=1e-11]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=109, Expect=1e-24]} {RNA1509_44169} {RNA1310_10509} {RNA815_24170}
4. MligTC455_34788 154 3.2 Mlig455_029712, Mlig455_034855

Neo: -

Age: -

 ELAVL4 0.956 - - - - - 0.956

Mlig455_029712 {REF} {Length: 2469} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=139.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=28.6]; Occluded RNA-recognition motif [PF16842.7, score=18.5]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=258, Expect=8e-83]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=254, Expect=1e-81]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=253, Expect=6e-81]; ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=249, Expect=9e-80]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=261, Expect=2e-84]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=254, Expect=6e-82]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=253, Expect=1e-82]; ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=248, Expect=1e-79]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=255, Expect=3e-81]} {Celegans: WBGene00001368, exc-7, [RH, Score=256, Expect=3e-81]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [Score=262, Expect=1e-84]} {RNA1310_56549} {RNA815_31635}

Mlig455_034855 {REF} {Length: 2385} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=24.2]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=228, Expect=5e-73]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=222, Expect=6e-71]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=222, Expect=7e-71]; ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=218, Expect=2e-69]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=228, Expect=3e-73]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=224, Expect=4e-73]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=223, Expect=6e-71]; ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=217, Expect=2e-69]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=233, Expect=1e-74]} {Celegans: WBGene00001368, exc-7, [Score=225, Expect=3e-71]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [Score=221, Expect=2e-70]} {RNA1310_56549} {RNA815_31635}
5. MligTC455_48489 332 6.91 Mlig455_013844

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.459

 MX2 0.951 - - - - - 0.951 Mlig455_013844 {REF} {Length: 3484} {Pfam: Dynamin family [PF00350.25, score=88.9]; Dynamin central region [PF01031.22, score=31.1]; Dynamin GTPase effector domain [PF02212.20, score=25.1]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=113, Expect=1e-25]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=95.5, Expect=5e-20]; ENSMUSG00000000386, Mx1, MX dynamin-like GTPase 1, [Score=92.4, Expect=3e-20]} {Dmel: FBgn0261276, Opa1, Optic atrophy 1, [Score=72.0, Expect=1e-12]} {Celegans: WBGene00001134, eat-3, [Score=76.3, Expect=4e-14]} {Smed: dd_Smed_v6_8582_0_1, dd_Smed_v6_8582_0_1, [Score=84.3, Expect=5e-19]} {RNA1509_6344} {RNA1310_8723, RNA1509_6344} {RNA1509_6344, RNA815_3559}

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