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Results for MligTC455_34109

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34109 388 8.07 Mlig455_036207, Mlig455_060306, Mlig455_064034, Mlig455_064415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.742

 NYNRIN

Mlig455_036207 {REF} {Length: 2552} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.9]; Integrase zinc binding domain [PF17921.3, score=66.2]; Integrase core domain [PF00665.28, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.2]; H2C2 zinc finger [PF09337.12, score=26.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=243, Expect=9e-68]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Mlig455_060306 {REF} {Length: 3314} {Pfam: Integrase core domain [PF00665.28, score=45.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=66.6, Expect=2e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=1e-41]} {RNA1509_45628} {RNA1310_4631.1} {RNA815_1825.1}

Mlig455_064034 {REF} {Length: 907} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.0]; Integrase core domain [PF00665.28, score=41.0]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=94.0, Expect=8e-22]} {RNA1310_90344}

Mlig455_064415 {REF} {Length: 9411} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]} {RNA1509_34066} {RNA1310_1125} {RNA815_1825.1}

Cumulative graph for MligTC455_34109

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.62 3.337 0.21823 0.86041
RegionR2 1.608 3.337 0.03818 0.22660
RegionR3 -0.195 3.337 0.86431 1.00000
RegionR4 0.352 3.337 0.63771 0.94413
RegionR5 -0.022 3.337 0.98881 1.00000
RegionR6 0.206 3.337 0.78877 1.00000
RegionR7 0.841 3.337 0.36398 0.99946
RegionR8 0.83 3.337 0.46820 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.501 3.337 0.74716 1.00000
RegenerationR2 0.649 3.337 0.20429 0.65121
RegenerationR3 1.36 3.337 0.04530 0.37148
RegenerationR4 0.785 3.337 0.18422 0.62568
RegenerationR5 1.225 3.337 0.04123 0.33391
RegenerationR6 2.003 3.337 0.00231 0.05446
RegenerationBL 1.471 3.337 0.02760 0.18410
RegenerationTP 1.81 3.337 0.00985 0.16839


Genes with expression patterns similar to MligTC455_34109

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34109 388 8.07 Mlig455_036207, Mlig455_060306, Mlig455_064034, Mlig455_064415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.742

 NYNRIN 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_036207 {REF} {Length: 2552} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.9]; Integrase zinc binding domain [PF17921.3, score=66.2]; Integrase core domain [PF00665.28, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.2]; H2C2 zinc finger [PF09337.12, score=26.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=243, Expect=9e-68]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Mlig455_060306 {REF} {Length: 3314} {Pfam: Integrase core domain [PF00665.28, score=45.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=66.6, Expect=2e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=1e-41]} {RNA1509_45628} {RNA1310_4631.1} {RNA815_1825.1}

Mlig455_064034 {REF} {Length: 907} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.0]; Integrase core domain [PF00665.28, score=41.0]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=94.0, Expect=8e-22]} {RNA1310_90344}

Mlig455_064415 {REF} {Length: 9411} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]} {RNA1509_34066} {RNA1310_1125} {RNA815_1825.1}
2. MligTC455_27810 296 6.16 Mlig455_014545, Mlig455_031367

Neo: -

Age: -

 2.65 - - 0.960 0.802 0.888 -

Mlig455_014545 {REF} {Length: 1192} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_031367 {REF} {Length: 663} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}
3. MligTC455_37718 606 12.62 Mlig455_020685, Mlig455_024415, Mlig455_032310, Mlig455_033332, Mlig455_047018, Mlig455_056964

Neo: -

Age: -

 2.537 - - 0.839 0.742 0.956 -

Mlig455_020685 {REF} {Length: 2294} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_024415 {REF} {Length: 2109} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_032310 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_21106} {RNA815_43995.2}

Mlig455_033332 {REF} {Length: 2377} {RNA1509_57867} {RNA1310_24332} {RNA815_23786}

Mlig455_047018 {REF} {Length: 1021} {TRANSSPLICED} {RNA1509_47311} {RNA1310_36606.2} {RNA815_21848}

Mlig455_056964 {REF} {Length: 2243} {RNA1509_40552} {RNA1310_1374.1} {RNA815_23786}
4. MligTC455_27815 1267 26.39 Mlig455_003681, Mlig455_007743, Mlig455_008454, Mlig455_014548, Mlig455_019559, Mlig455_023634, Mlig455_026256, Mlig455_029577, Mlig455_043741, Mlig455_070803

Neo: -

Age: logFC(26M/2M)=0.722

Regeneration-upregulated BL: 2.777

Regeneration-enriched BL: 2.777

 2.533 - - 0.977 0.716 0.840 -

Mlig455_003681 {REF} {Length: 907} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_007743 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_008454 {REF} {Length: 175} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_014548 {REF} {Length: 352} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_019559 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_023634 {REF} {Length: 1932} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.1}

Mlig455_026256 {REF} {Length: 1373} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}

Mlig455_029577 {REF} {Length: 431} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.2}

Mlig455_043741 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_070803 {REF} {Length: 7254} {RNA1509_55315} {RNA1310_14431} {RNA815_2170.1}
5. MligTC455_36061 33 0.69 Mlig455_007140

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 1.827 - - 0.954 - 0.873 - Mlig455_007140 {REF} {Length: 7333} {Smed: dd_Smed_v6_26523_0_1, dd_Smed_v6_26523_0_1, [Score=39.3, Expect=1e-05]} {RNA1509_21038} {RNA1310_17276.1} {RNA815_20842.1}
6. MligTC455_28111 790 16.45 Mlig455_002387, Mlig455_009539, Mlig455_038667, Mlig455_051333, Mlig455_056392, Mlig455_070777

Neo: -

Age: -

 1.824 - - 0.952 - 0.872 -

Mlig455_002387 {REF} {Length: 1959} {NoTransDecoderORF} {RNA1509_35798} {RNA1310_15891} {RNA815_15623}

Mlig455_009539 {REF} {Length: 900} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_14078} {RNA815_15623}

Mlig455_038667 {REF} {Length: 1938} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}

Mlig455_051333 {REF} {Length: 2762} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_13614.1} {RNA815_15623}

Mlig455_056392 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870}

Mlig455_070777 {REF} {Length: 237} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870}
7. MligTC455_28104 102 2.13 Mlig455_026681, Mlig455_026757

Neo: -

Age: -

 1.798 - - 0.961 - 0.837 -

Mlig455_026681 {REF} {Length: 1025} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_13614.1} {RNA815_15623}

Mlig455_026757 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}
8. MligTC455_15494 299 6.23 Mlig455_003802

Neo: -

Age: -

 1.726 - - - 0.766 0.960 - Mlig455_003802 {REF} {Length: 2576} {RNA1509_23541} {RNA1310_23341.1} {RNA815_11967.1}
9. MligTC455_30268 108 2.25 Mlig455_026672

Neo: -

Age: -

 1.721 - - - 0.768 0.953 - Mlig455_026672 {REF} {Length: 4320} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=29.9]; Endonuclease-reverse transcriptase [PF14529.8, score=26.1]; PHD-finger [PF00628.31, score=24.9]} {RNA1509_5039} {RNA1310_554.1} {RNA815_3500.1}
10. MligTC455_46107 48 0.99 Mlig455_059438

Neo: -

Age: -

 NEUROD1 0.972 - - - - 0.972 - Mlig455_059438 {REF} {Length: 2657} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.6]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=64.3, Expect=9e-11]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=63.2, Expect=7e-11]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.6, Expect=9e-10]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=6e-10]} {Mouse: ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=65.1, Expect=7e-12]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=64.3, Expect=6e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=63.2, Expect=6e-11]; ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=62.4, Expect=2e-10]; ENSMUSG00000026735, Ptf1a, pancreas specific transcription factor, 1a, [Score=62.0, Expect=3e-10]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=55.5, Expect=9e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=67.4, Expect=4e-13]} {RNA1509_59553} {RNA1310_27559} {RNA815_43865.1}
11. MligTC455_38739 39 0.81 Mlig455_014528

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_014528 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_13586} {RNA1310_52607} {RNA815_2048.1}
12. MligTC455_28684 179 3.74 Mlig455_027569

Neo: -

Age: Down-Up-Up

 0.964 - - - - 0.964 - Mlig455_027569 {REF} {Length: 1247} {RNA1509_49958} {RNA1310_47608, RNA1509_49958} {RNA1509_49958, RNA815_33601}
13. MligTC455_30139 688 14.34 Mlig455_059811

Neo: -

Age: -

 TBC1D22B 0.961 - - - 0.961 - - Mlig455_059811 {REF} {Length: 8476} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=144.0]; Spt20 family [PF12090.10, score=18.3]} {Human: ENSG00000065491, TBC1D22B, TBC1 domain family member 22B, [RH, Score=387, Expect=4e-130]; ENSG00000054611, TBC1D22A, TBC1 domain family member 22A, [RH, Score=380, Expect=5e-128]} {Mouse: ENSMUSG00000042203, Tbc1d22b, TBC1 domain family, member 22B, [RH, Score=387, Expect=4e-130]; ENSMUSG00000051864, Tbc1d22a, TBC1 domain family, member 22a, [RH, Score=374, Expect=8e-125]} {Dmel: FBgn0038855, CG5745, [RH, Score=325, Expect=8e-106]} {Celegans: WBGene00009322, tbc-3, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=318, Expect=1e-103]} {Smed: dd_Smed_v6_8230_0_1, dd_Smed_v6_8230_0_1, [RH, Score=405, Expect=4e-138]} {RNA1509_15226, RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073} {RNA1310_15852.1, RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073} {RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073, RNA815_5429}
14. MligTC455_41460 248 5.17 Mlig455_050207

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_050207 {REF} {Length: 3147} {RNA1509_54432} {RNA1310_30280, RNA1509_54432} {RNA1509_54432, RNA815_15876.1}
15. MligTC455_29968 40 0.83 Mlig455_061290

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_061290 {REF} {Length: 1762} {Pfam: Protein of unknown function DUF16 [PF01519.18, score=19.4]} {RNA1509_49894} {RNA1310_436.1, RNA1509_49894} {RNA1509_49894, RNA815_16288}
16. MligTC455_30302 162 3.38 Mlig455_068935

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R5: 2.053/0.03938

 0.957 - - - - 0.957 - Mlig455_068935 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=31.8]; Zinc knuckle [PF13696.8, score=23.3]; Zinc knuckle [PF00098.25, score=23.0]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
17. MligTC455_36487 138 2.88 Mlig455_013543

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_013543 {REF} {Length: 2784} {NoTransDecoderORF} {RNA1509_55514} {RNA1310_26481} {RNA815_10967.1}
18. MligTC455_38740 49 1.02 Mlig455_014973

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_014973 {REF} {Length: 1732} {RNA1509_14379} {RNA1310_52607} {RNA815_11562.1}
19. MligTC455_51704 158 3.29 Mlig455_051585

Neo: -

Age: -

 EAF1 0.952 - - - - 0.952 - Mlig455_051585 {REF} {Length: 1822} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=53.4]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [Score=87.0, Expect=2e-20]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [Score=87.0, Expect=1e-20]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [Score=68.2, Expect=2e-13]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [Score=71.2, Expect=2e-15]} {RNA1509_52015} {RNA1310_64746} {RNA815_8303}
20. MligTC455_27603 289 6.03 Mlig455_014807, Mlig455_014808, Mlig455_048371, Mlig455_048373, Mlig455_048375

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_014807 {REF} {Length: 1619} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.0]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.6]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}

Mlig455_014808 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_36395} {RNA1310_35929, RNA1509_36395} {RNA1509_36395, RNA815_23270}

Mlig455_048371 {REF} {Length: 6706} {RNA1509_36395} {RNA1310_2280.1} {RNA815_694.1}

Mlig455_048373 {REF} {Length: 1586} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.5]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.3]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}

Mlig455_048375 {REF} {Length: 1628} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.5]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.3]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}

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